GO Enrichment Analysis of Co-expressed Genes with
AT2G47590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 5 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 6 | GO:0060416: response to growth hormone | 0.00E+00 |
| 7 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 8 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.25E-06 |
| 9 | GO:0010020: chloroplast fission | 1.61E-05 |
| 10 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.01E-05 |
| 11 | GO:0032543: mitochondrial translation | 3.28E-05 |
| 12 | GO:0043266: regulation of potassium ion transport | 1.60E-04 |
| 13 | GO:0010480: microsporocyte differentiation | 1.60E-04 |
| 14 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.60E-04 |
| 15 | GO:2000021: regulation of ion homeostasis | 1.60E-04 |
| 16 | GO:0006430: lysyl-tRNA aminoacylation | 1.60E-04 |
| 17 | GO:0010289: homogalacturonan biosynthetic process | 3.65E-04 |
| 18 | GO:0010270: photosystem II oxygen evolving complex assembly | 3.65E-04 |
| 19 | GO:1901679: nucleotide transmembrane transport | 3.65E-04 |
| 20 | GO:0045717: negative regulation of fatty acid biosynthetic process | 3.65E-04 |
| 21 | GO:0080148: negative regulation of response to water deprivation | 3.65E-04 |
| 22 | GO:0080121: AMP transport | 5.97E-04 |
| 23 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.97E-04 |
| 24 | GO:0006418: tRNA aminoacylation for protein translation | 6.66E-04 |
| 25 | GO:0010239: chloroplast mRNA processing | 8.53E-04 |
| 26 | GO:0042989: sequestering of actin monomers | 8.53E-04 |
| 27 | GO:0016556: mRNA modification | 8.53E-04 |
| 28 | GO:0006424: glutamyl-tRNA aminoacylation | 8.53E-04 |
| 29 | GO:0046739: transport of virus in multicellular host | 8.53E-04 |
| 30 | GO:0043572: plastid fission | 8.53E-04 |
| 31 | GO:0010371: regulation of gibberellin biosynthetic process | 8.53E-04 |
| 32 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.06E-03 |
| 33 | GO:0006749: glutathione metabolic process | 1.13E-03 |
| 34 | GO:0015867: ATP transport | 1.13E-03 |
| 35 | GO:0006808: regulation of nitrogen utilization | 1.13E-03 |
| 36 | GO:0045487: gibberellin catabolic process | 1.43E-03 |
| 37 | GO:0000304: response to singlet oxygen | 1.43E-03 |
| 38 | GO:0030041: actin filament polymerization | 1.43E-03 |
| 39 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.43E-03 |
| 40 | GO:0016554: cytidine to uridine editing | 1.76E-03 |
| 41 | GO:0006828: manganese ion transport | 1.76E-03 |
| 42 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.76E-03 |
| 43 | GO:0035435: phosphate ion transmembrane transport | 1.76E-03 |
| 44 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.76E-03 |
| 45 | GO:0010405: arabinogalactan protein metabolic process | 1.76E-03 |
| 46 | GO:0015866: ADP transport | 1.76E-03 |
| 47 | GO:0016126: sterol biosynthetic process | 2.07E-03 |
| 48 | GO:0042026: protein refolding | 2.11E-03 |
| 49 | GO:1901259: chloroplast rRNA processing | 2.11E-03 |
| 50 | GO:0006458: 'de novo' protein folding | 2.11E-03 |
| 51 | GO:0098655: cation transmembrane transport | 2.11E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 2.43E-03 |
| 53 | GO:0009395: phospholipid catabolic process | 2.48E-03 |
| 54 | GO:0048437: floral organ development | 2.48E-03 |
| 55 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.48E-03 |
| 56 | GO:0051510: regulation of unidimensional cell growth | 2.48E-03 |
| 57 | GO:0008610: lipid biosynthetic process | 2.88E-03 |
| 58 | GO:0006353: DNA-templated transcription, termination | 2.88E-03 |
| 59 | GO:0009704: de-etiolation | 2.88E-03 |
| 60 | GO:0016559: peroxisome fission | 2.88E-03 |
| 61 | GO:0048527: lateral root development | 3.10E-03 |
| 62 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.29E-03 |
| 63 | GO:0009657: plastid organization | 3.29E-03 |
| 64 | GO:0006526: arginine biosynthetic process | 3.29E-03 |
| 65 | GO:0032544: plastid translation | 3.29E-03 |
| 66 | GO:0098656: anion transmembrane transport | 3.72E-03 |
| 67 | GO:0000373: Group II intron splicing | 3.72E-03 |
| 68 | GO:0006839: mitochondrial transport | 3.86E-03 |
| 69 | GO:0009658: chloroplast organization | 4.12E-03 |
| 70 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 4.17E-03 |
| 71 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.17E-03 |
| 72 | GO:1900865: chloroplast RNA modification | 4.17E-03 |
| 73 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.17E-03 |
| 74 | GO:0009793: embryo development ending in seed dormancy | 4.53E-03 |
| 75 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.64E-03 |
| 76 | GO:0006816: calcium ion transport | 5.12E-03 |
| 77 | GO:0006415: translational termination | 5.12E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.12E-03 |
| 79 | GO:0048229: gametophyte development | 5.12E-03 |
| 80 | GO:0012501: programmed cell death | 5.62E-03 |
| 81 | GO:0016024: CDP-diacylglycerol biosynthetic process | 5.62E-03 |
| 82 | GO:0030048: actin filament-based movement | 6.14E-03 |
| 83 | GO:0010075: regulation of meristem growth | 6.14E-03 |
| 84 | GO:0048768: root hair cell tip growth | 6.67E-03 |
| 85 | GO:0010207: photosystem II assembly | 6.67E-03 |
| 86 | GO:0009934: regulation of meristem structural organization | 6.67E-03 |
| 87 | GO:0071732: cellular response to nitric oxide | 7.22E-03 |
| 88 | GO:0090351: seedling development | 7.22E-03 |
| 89 | GO:0010025: wax biosynthetic process | 7.79E-03 |
| 90 | GO:0007010: cytoskeleton organization | 8.38E-03 |
| 91 | GO:0061077: chaperone-mediated protein folding | 9.59E-03 |
| 92 | GO:0031408: oxylipin biosynthetic process | 9.59E-03 |
| 93 | GO:0016998: cell wall macromolecule catabolic process | 9.59E-03 |
| 94 | GO:0009814: defense response, incompatible interaction | 1.02E-02 |
| 95 | GO:0071369: cellular response to ethylene stimulus | 1.09E-02 |
| 96 | GO:0016117: carotenoid biosynthetic process | 1.22E-02 |
| 97 | GO:0048653: anther development | 1.29E-02 |
| 98 | GO:0000413: protein peptidyl-prolyl isomerization | 1.29E-02 |
| 99 | GO:0006520: cellular amino acid metabolic process | 1.36E-02 |
| 100 | GO:0006814: sodium ion transport | 1.43E-02 |
| 101 | GO:0007623: circadian rhythm | 1.45E-02 |
| 102 | GO:0045490: pectin catabolic process | 1.45E-02 |
| 103 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.58E-02 |
| 104 | GO:0071554: cell wall organization or biogenesis | 1.58E-02 |
| 105 | GO:0009739: response to gibberellin | 1.62E-02 |
| 106 | GO:0007264: small GTPase mediated signal transduction | 1.65E-02 |
| 107 | GO:0030163: protein catabolic process | 1.73E-02 |
| 108 | GO:0071281: cellular response to iron ion | 1.73E-02 |
| 109 | GO:0016125: sterol metabolic process | 1.81E-02 |
| 110 | GO:0006468: protein phosphorylation | 1.84E-02 |
| 111 | GO:0006810: transport | 2.23E-02 |
| 112 | GO:0010411: xyloglucan metabolic process | 2.30E-02 |
| 113 | GO:0009817: defense response to fungus, incompatible interaction | 2.47E-02 |
| 114 | GO:0048481: plant ovule development | 2.47E-02 |
| 115 | GO:0009407: toxin catabolic process | 2.65E-02 |
| 116 | GO:0016051: carbohydrate biosynthetic process | 2.93E-02 |
| 117 | GO:0030001: metal ion transport | 3.21E-02 |
| 118 | GO:0051707: response to other organism | 3.51E-02 |
| 119 | GO:0042546: cell wall biogenesis | 3.61E-02 |
| 120 | GO:0009636: response to toxic substance | 3.81E-02 |
| 121 | GO:0016042: lipid catabolic process | 3.99E-02 |
| 122 | GO:0042538: hyperosmotic salinity response | 4.12E-02 |
| 123 | GO:0006813: potassium ion transport | 4.34E-02 |
| 124 | GO:0071555: cell wall organization | 4.42E-02 |
| 125 | GO:0016310: phosphorylation | 4.71E-02 |
| 126 | GO:0006096: glycolytic process | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 3 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 4 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 5 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 6 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.60E-04 |
| 7 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.60E-04 |
| 8 | GO:0004824: lysine-tRNA ligase activity | 1.60E-04 |
| 9 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.60E-04 |
| 10 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.60E-04 |
| 11 | GO:0004163: diphosphomevalonate decarboxylase activity | 1.60E-04 |
| 12 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 3.65E-04 |
| 13 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.65E-04 |
| 14 | GO:0015095: magnesium ion transmembrane transporter activity | 3.89E-04 |
| 15 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 4.38E-04 |
| 16 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 5.97E-04 |
| 17 | GO:0017150: tRNA dihydrouridine synthase activity | 5.97E-04 |
| 18 | GO:0002161: aminoacyl-tRNA editing activity | 5.97E-04 |
| 19 | GO:0030267: glyoxylate reductase (NADP) activity | 5.97E-04 |
| 20 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 5.97E-04 |
| 21 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 5.97E-04 |
| 22 | GO:0004176: ATP-dependent peptidase activity | 7.30E-04 |
| 23 | GO:0016788: hydrolase activity, acting on ester bonds | 7.49E-04 |
| 24 | GO:0001872: (1->3)-beta-D-glucan binding | 8.53E-04 |
| 25 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 8.53E-04 |
| 26 | GO:0016149: translation release factor activity, codon specific | 8.53E-04 |
| 27 | GO:0043023: ribosomal large subunit binding | 8.53E-04 |
| 28 | GO:0008508: bile acid:sodium symporter activity | 8.53E-04 |
| 29 | GO:0004812: aminoacyl-tRNA ligase activity | 1.01E-03 |
| 30 | GO:0016836: hydro-lyase activity | 1.13E-03 |
| 31 | GO:0080122: AMP transmembrane transporter activity | 1.43E-03 |
| 32 | GO:0003785: actin monomer binding | 1.43E-03 |
| 33 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.76E-03 |
| 34 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.76E-03 |
| 35 | GO:0042578: phosphoric ester hydrolase activity | 1.76E-03 |
| 36 | GO:0008237: metallopeptidase activity | 1.84E-03 |
| 37 | GO:0015217: ADP transmembrane transporter activity | 2.11E-03 |
| 38 | GO:0051920: peroxiredoxin activity | 2.11E-03 |
| 39 | GO:0015631: tubulin binding | 2.11E-03 |
| 40 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.11E-03 |
| 41 | GO:0005347: ATP transmembrane transporter activity | 2.11E-03 |
| 42 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.11E-03 |
| 43 | GO:0008312: 7S RNA binding | 2.88E-03 |
| 44 | GO:0016209: antioxidant activity | 2.88E-03 |
| 45 | GO:0003747: translation release factor activity | 3.72E-03 |
| 46 | GO:0005384: manganese ion transmembrane transporter activity | 4.17E-03 |
| 47 | GO:0047617: acyl-CoA hydrolase activity | 4.17E-03 |
| 48 | GO:0044183: protein binding involved in protein folding | 5.12E-03 |
| 49 | GO:0015114: phosphate ion transmembrane transporter activity | 6.14E-03 |
| 50 | GO:0005524: ATP binding | 6.65E-03 |
| 51 | GO:0003774: motor activity | 6.67E-03 |
| 52 | GO:0008131: primary amine oxidase activity | 6.67E-03 |
| 53 | GO:0004674: protein serine/threonine kinase activity | 7.06E-03 |
| 54 | GO:0004190: aspartic-type endopeptidase activity | 7.22E-03 |
| 55 | GO:0003924: GTPase activity | 8.87E-03 |
| 56 | GO:0043424: protein histidine kinase binding | 8.97E-03 |
| 57 | GO:0008324: cation transmembrane transporter activity | 8.97E-03 |
| 58 | GO:0033612: receptor serine/threonine kinase binding | 9.59E-03 |
| 59 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 9.59E-03 |
| 60 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.02E-02 |
| 61 | GO:0019843: rRNA binding | 1.05E-02 |
| 62 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.08E-02 |
| 63 | GO:0030570: pectate lyase activity | 1.09E-02 |
| 64 | GO:0008080: N-acetyltransferase activity | 1.36E-02 |
| 65 | GO:0003713: transcription coactivator activity | 1.36E-02 |
| 66 | GO:0050662: coenzyme binding | 1.43E-02 |
| 67 | GO:0019901: protein kinase binding | 1.50E-02 |
| 68 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.58E-02 |
| 69 | GO:0042802: identical protein binding | 1.85E-02 |
| 70 | GO:0016413: O-acetyltransferase activity | 1.97E-02 |
| 71 | GO:0030247: polysaccharide binding | 2.30E-02 |
| 72 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.30E-02 |
| 73 | GO:0016740: transferase activity | 2.36E-02 |
| 74 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.60E-02 |
| 75 | GO:0004222: metalloendopeptidase activity | 2.65E-02 |
| 76 | GO:0004497: monooxygenase activity | 2.79E-02 |
| 77 | GO:0003993: acid phosphatase activity | 3.02E-02 |
| 78 | GO:0052689: carboxylic ester hydrolase activity | 3.08E-02 |
| 79 | GO:0004364: glutathione transferase activity | 3.41E-02 |
| 80 | GO:0005525: GTP binding | 3.42E-02 |
| 81 | GO:0042803: protein homodimerization activity | 3.50E-02 |
| 82 | GO:0043621: protein self-association | 3.71E-02 |
| 83 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.91E-02 |
| 84 | GO:0005509: calcium ion binding | 4.00E-02 |
| 85 | GO:0051287: NAD binding | 4.02E-02 |
| 86 | GO:0004519: endonuclease activity | 4.46E-02 |
| 87 | GO:0045330: aspartyl esterase activity | 4.66E-02 |
| 88 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.74E-15 |
| 3 | GO:0009570: chloroplast stroma | 9.33E-11 |
| 4 | GO:0009941: chloroplast envelope | 2.00E-06 |
| 5 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 1.60E-04 |
| 6 | GO:0080085: signal recognition particle, chloroplast targeting | 3.65E-04 |
| 7 | GO:0031969: chloroplast membrane | 1.00E-03 |
| 8 | GO:0009536: plastid | 1.29E-03 |
| 9 | GO:0009533: chloroplast stromal thylakoid | 2.48E-03 |
| 10 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.29E-03 |
| 11 | GO:0046658: anchored component of plasma membrane | 3.37E-03 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.72E-03 |
| 13 | GO:0005886: plasma membrane | 4.63E-03 |
| 14 | GO:0016459: myosin complex | 4.64E-03 |
| 15 | GO:0000311: plastid large ribosomal subunit | 5.62E-03 |
| 16 | GO:0009579: thylakoid | 5.66E-03 |
| 17 | GO:0009534: chloroplast thylakoid | 5.75E-03 |
| 18 | GO:0005938: cell cortex | 6.14E-03 |
| 19 | GO:0009508: plastid chromosome | 6.14E-03 |
| 20 | GO:0030659: cytoplasmic vesicle membrane | 6.67E-03 |
| 21 | GO:0043234: protein complex | 7.79E-03 |
| 22 | GO:0009706: chloroplast inner membrane | 8.37E-03 |
| 23 | GO:0009532: plastid stroma | 9.59E-03 |
| 24 | GO:0015629: actin cytoskeleton | 1.09E-02 |
| 25 | GO:0009535: chloroplast thylakoid membrane | 1.37E-02 |
| 26 | GO:0009295: nucleoid | 1.89E-02 |
| 27 | GO:0030529: intracellular ribonucleoprotein complex | 2.05E-02 |
| 28 | GO:0009707: chloroplast outer membrane | 2.47E-02 |
| 29 | GO:0031225: anchored component of membrane | 3.20E-02 |
| 30 | GO:0031977: thylakoid lumen | 3.31E-02 |
| 31 | GO:0005743: mitochondrial inner membrane | 3.82E-02 |
| 32 | GO:0005768: endosome | 3.88E-02 |