co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G47110

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072321: chaperone-mediated protein transport	0.00E+00
2	GO:0044843: cell cycle G1/S phase transition	0.00E+00
3	GO:0000494: box C/D snoRNA 3'-end processing	0.00E+00
4	GO:0071731: response to nitric oxide	0.00E+00
5	GO:1990258: histone glutamine methylation	0.00E+00
6	GO:0006412: translation	1.62E-67
7	GO:0042254: ribosome biogenesis	2.15E-32
8	GO:0000027: ribosomal large subunit assembly	1.15E-07
9	GO:0009735: response to cytokinin	2.41E-06
10	GO:0006626: protein targeting to mitochondrion	4.03E-06
11	GO:0009793: embryo development ending in seed dormancy	7.77E-06
12	GO:0031167: rRNA methylation	1.41E-05
13	GO:0007005: mitochondrion organization	1.47E-05
14	GO:0006364: rRNA processing	2.11E-05
15	GO:0001510: RNA methylation	6.86E-05
16	GO:0045041: protein import into mitochondrial intermembrane space	2.28E-04
17	GO:0002181: cytoplasmic translation	3.80E-04
18	GO:0045039: protein import into mitochondrial inner membrane	3.80E-04
19	GO:1902626: assembly of large subunit precursor of preribosome	3.80E-04
20	GO:0046686: response to cadmium ion	5.20E-04
21	GO:0006986: response to unfolded protein	5.46E-04
22	GO:0070301: cellular response to hydrogen peroxide	5.46E-04
23	GO:0051085: chaperone mediated protein folding requiring cofactor	5.46E-04
24	GO:0006241: CTP biosynthetic process	5.46E-04
25	GO:0006165: nucleoside diphosphate phosphorylation	5.46E-04
26	GO:0006228: UTP biosynthetic process	5.46E-04
27	GO:0051131: chaperone-mediated protein complex assembly	5.46E-04
28	GO:0008033: tRNA processing	5.67E-04
29	GO:0006183: GTP biosynthetic process	7.26E-04
30	GO:0071493: cellular response to UV-B	9.17E-04
31	GO:0016444: somatic cell DNA recombination	1.34E-03
32	GO:0042026: protein refolding	1.34E-03
33	GO:0006458: 'de novo' protein folding	1.34E-03
34	GO:0000028: ribosomal small subunit assembly	1.81E-03
35	GO:0042255: ribosome assembly	1.81E-03
36	GO:0001558: regulation of cell growth	2.07E-03
37	GO:0000387: spliceosomal snRNP assembly	2.61E-03
38	GO:0010162: seed dormancy process	2.90E-03
39	GO:0006820: anion transport	3.50E-03
40	GO:0010229: inflorescence development	3.82E-03
41	GO:0010102: lateral root morphogenesis	3.82E-03
42	GO:0048467: gynoecium development	4.15E-03
43	GO:0030150: protein import into mitochondrial matrix	5.19E-03
44	GO:0009944: polarity specification of adaxial/abaxial axis	5.19E-03
45	GO:0051302: regulation of cell division	5.55E-03
46	GO:0006334: nucleosome assembly	5.93E-03
47	GO:0061077: chaperone-mediated protein folding	5.93E-03
48	GO:0009294: DNA mediated transformation	6.70E-03
49	GO:0000413: protein peptidyl-prolyl isomerization	7.93E-03
50	GO:0009791: post-embryonic development	9.23E-03
51	GO:0032502: developmental process	1.01E-02
52	GO:0016049: cell growth	1.46E-02
53	GO:0010311: lateral root formation	1.57E-02
54	GO:0006811: ion transport	1.62E-02
55	GO:0010043: response to zinc ion	1.68E-02
56	GO:0048527: lateral root development	1.68E-02
57	GO:0000724: double-strand break repair via homologous recombination	1.73E-02
58	GO:0009408: response to heat	2.06E-02
59	GO:0008283: cell proliferation	2.14E-02
60	GO:0009734: auxin-activated signaling pathway	2.90E-02
61	GO:0009620: response to fungus	3.19E-02
62	GO:0000398: mRNA splicing, via spliceosome	3.77E-02
63	GO:0006457: protein folding	4.71E-02
64	GO:0006413: translational initiation	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:1990259: histone-glutamine methyltransferase activity	0.00E+00
2	GO:0016018: cyclosporin A binding	0.00E+00
3	GO:0003735: structural constituent of ribosome	2.15E-78
4	GO:0003729: mRNA binding	1.27E-20
5	GO:0008649: rRNA methyltransferase activity	1.89E-06
6	GO:0003723: RNA binding	2.45E-05
7	GO:0030515: snoRNA binding	4.14E-05
8	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.07E-04
9	GO:0070180: large ribosomal subunit rRNA binding	3.80E-04
10	GO:0004550: nucleoside diphosphate kinase activity	5.46E-04
11	GO:0008235: metalloexopeptidase activity	1.57E-03
12	GO:0003746: translation elongation factor activity	1.72E-03
13	GO:0015288: porin activity	1.81E-03
14	GO:0008308: voltage-gated anion channel activity	2.07E-03
15	GO:0005507: copper ion binding	2.56E-03
16	GO:0001055: RNA polymerase II activity	2.61E-03
17	GO:0001054: RNA polymerase I activity	3.20E-03
18	GO:0044183: protein binding involved in protein folding	3.20E-03
19	GO:0004129: cytochrome-c oxidase activity	3.20E-03
20	GO:0001056: RNA polymerase III activity	3.50E-03
21	GO:0015266: protein channel activity	3.82E-03
22	GO:0051082: unfolded protein binding	4.20E-03
23	GO:0004407: histone deacetylase activity	5.19E-03
24	GO:0051087: chaperone binding	5.55E-03
25	GO:0050897: cobalt ion binding	1.68E-02
26	GO:0042393: histone binding	1.96E-02
27	GO:0003924: GTPase activity	2.06E-02
28	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.39E-02
29	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.65E-02
30	GO:0008026: ATP-dependent helicase activity	3.55E-02
31	GO:0019843: rRNA binding	4.00E-02
32	GO:0008565: protein transporter activity	4.54E-02

Rank	GO Term	Adjusted P value
1	GO:0043186: P granule	0.00E+00
2	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
3	GO:0005840: ribosome	7.69E-60
4	GO:0022625: cytosolic large ribosomal subunit	1.57E-56
5	GO:0022626: cytosolic ribosome	5.39E-50
6	GO:0005730: nucleolus	2.14E-32
7	GO:0022627: cytosolic small ribosomal subunit	2.58E-25
8	GO:0009506: plasmodesma	2.28E-18
9	GO:0005737: cytoplasm	5.68E-17
10	GO:0005829: cytosol	1.22E-15
11	GO:0015934: large ribosomal subunit	4.33E-13
12	GO:0005774: vacuolar membrane	5.01E-10
13	GO:0016020: membrane	1.16E-07
14	GO:0005773: vacuole	4.56E-06
15	GO:0005618: cell wall	8.89E-06
16	GO:0031428: box C/D snoRNP complex	2.15E-05
17	GO:0005886: plasma membrane	6.32E-05
18	GO:0005742: mitochondrial outer membrane translocase complex	6.86E-05
19	GO:0015030: Cajal body	1.03E-04
20	GO:0032040: small-subunit processome	1.68E-04
21	GO:0005758: mitochondrial intermembrane space	3.08E-04
22	GO:0015935: small ribosomal subunit	3.74E-04
23	GO:0034719: SMN-Sm protein complex	3.80E-04
24	GO:0005682: U5 snRNP	7.26E-04
25	GO:0005687: U4 snRNP	9.17E-04
26	GO:0097526: spliceosomal tri-snRNP complex	9.17E-04
27	GO:0005746: mitochondrial respiratory chain	9.17E-04
28	GO:0005689: U12-type spliceosomal complex	1.34E-03
29	GO:0071004: U2-type prespliceosome	1.81E-03
30	GO:0046930: pore complex	2.07E-03
31	GO:0005736: DNA-directed RNA polymerase I complex	2.33E-03
32	GO:0005685: U1 snRNP	2.33E-03
33	GO:0005666: DNA-directed RNA polymerase III complex	2.61E-03
34	GO:0071011: precatalytic spliceosome	2.61E-03
35	GO:0005686: U2 snRNP	2.90E-03
36	GO:0000418: DNA-directed RNA polymerase IV complex	2.90E-03
37	GO:0071013: catalytic step 2 spliceosome	3.20E-03
38	GO:0005743: mitochondrial inner membrane	3.36E-03
39	GO:0005665: DNA-directed RNA polymerase II, core complex	3.50E-03
40	GO:0019013: viral nucleocapsid	3.82E-03
41	GO:0005741: mitochondrial outer membrane	5.93E-03
42	GO:0005759: mitochondrial matrix	6.59E-03
43	GO:0016592: mediator complex	1.01E-02
44	GO:0030529: intracellular ribonucleoprotein complex	1.25E-02
45	GO:0009507: chloroplast	1.31E-02
46	GO:0005681: spliceosomal complex	2.99E-02
47	GO:0005747: mitochondrial respiratory chain complex I	3.05E-02
48	GO:0005732: small nucleolar ribonucleoprotein complex	3.62E-02