co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015717: triose phosphate transport	0.00E+00
2	GO:0015979: photosynthesis	2.79E-12
3	GO:0006106: fumarate metabolic process	2.30E-05
4	GO:1902458: positive regulation of stomatal opening	2.30E-05
5	GO:0010207: photosystem II assembly	2.72E-05
6	GO:1903426: regulation of reactive oxygen species biosynthetic process	5.89E-05
7	GO:0090391: granum assembly	1.04E-04
8	GO:0035436: triose phosphate transmembrane transport	1.04E-04
9	GO:0071484: cellular response to light intensity	1.55E-04
10	GO:0010027: thylakoid membrane organization	1.70E-04
11	GO:0010109: regulation of photosynthesis	2.12E-04
12	GO:0009765: photosynthesis, light harvesting	2.12E-04
13	GO:0015713: phosphoglycerate transport	2.12E-04
14	GO:0045038: protein import into chloroplast thylakoid membrane	2.73E-04
15	GO:0009107: lipoate biosynthetic process	2.73E-04
16	GO:0009643: photosynthetic acclimation	3.37E-04
17	GO:0071470: cellular response to osmotic stress	4.04E-04
18	GO:0009645: response to low light intensity stimulus	4.74E-04
19	GO:0010196: nonphotochemical quenching	4.74E-04
20	GO:0009769: photosynthesis, light harvesting in photosystem II	4.74E-04
21	GO:2000070: regulation of response to water deprivation	5.46E-04
22	GO:0015996: chlorophyll catabolic process	6.21E-04
23	GO:0007186: G-protein coupled receptor signaling pathway	6.21E-04
24	GO:0009735: response to cytokinin	6.51E-04
25	GO:0010206: photosystem II repair	6.98E-04
26	GO:0019684: photosynthesis, light reaction	9.42E-04
27	GO:0018119: peptidyl-cysteine S-nitrosylation	9.42E-04
28	GO:0009773: photosynthetic electron transport in photosystem I	9.42E-04
29	GO:0045037: protein import into chloroplast stroma	1.03E-03
30	GO:0006108: malate metabolic process	1.12E-03
31	GO:0009768: photosynthesis, light harvesting in photosystem I	1.59E-03
32	GO:0009269: response to desiccation	1.70E-03
33	GO:0042742: defense response to bacterium	1.74E-03
34	GO:0010182: sugar mediated signaling pathway	2.36E-03
35	GO:0015986: ATP synthesis coupled proton transport	2.48E-03
36	GO:0042128: nitrate assimilation	3.75E-03
37	GO:0018298: protein-chromophore linkage	4.17E-03
38	GO:0009817: defense response to fungus, incompatible interaction	4.17E-03
39	GO:0010218: response to far red light	4.46E-03
40	GO:0009631: cold acclimation	4.60E-03
41	GO:0009637: response to blue light	4.90E-03
42	GO:0034599: cellular response to oxidative stress	5.05E-03
43	GO:0006099: tricarboxylic acid cycle	5.05E-03
44	GO:0010114: response to red light	5.84E-03
45	GO:0009644: response to high light intensity	6.16E-03
46	GO:0043086: negative regulation of catalytic activity	8.06E-03
47	GO:0009409: response to cold	1.56E-02
48	GO:0045454: cell redox homeostasis	2.43E-02
49	GO:0006869: lipid transport	2.60E-02
50	GO:0032259: methylation	2.74E-02
51	GO:0009416: response to light stimulus	4.25E-02

Rank	GO Term	Adjusted P value
1	GO:0030385: ferredoxin:thioredoxin reductase activity	3.97E-08
2	GO:0004333: fumarate hydratase activity	2.30E-05
3	GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity	2.30E-05
4	GO:0071917: triose-phosphate transmembrane transporter activity	1.04E-04
5	GO:0004324: ferredoxin-NADP+ reductase activity	1.04E-04
6	GO:0016992: lipoate synthase activity	1.04E-04
7	GO:0016168: chlorophyll binding	1.81E-04
8	GO:0015120: phosphoglycerate transmembrane transporter activity	2.12E-04
9	GO:0080032: methyl jasmonate esterase activity	2.12E-04
10	GO:0003959: NADPH dehydrogenase activity	2.73E-04
11	GO:0004602: glutathione peroxidase activity	4.04E-04
12	GO:0051920: peroxiredoxin activity	4.04E-04
13	GO:0016209: antioxidant activity	5.46E-04
14	GO:0015078: hydrogen ion transmembrane transporter activity	6.21E-04
15	GO:0008266: poly(U) RNA binding	1.20E-03
16	GO:0031409: pigment binding	1.39E-03
17	GO:0004176: ATP-dependent peptidase activity	1.70E-03
18	GO:0051539: 4 iron, 4 sulfur cluster binding	5.36E-03
19	GO:0005198: structural molecule activity	6.33E-03
20	GO:0005509: calcium ion binding	1.06E-02
21	GO:0046910: pectinesterase inhibitor activity	1.28E-02
22	GO:0015297: antiporter activity	1.30E-02
23	GO:0008168: methyltransferase activity	1.79E-02
24	GO:0004601: peroxidase activity	1.84E-02
25	GO:0016788: hydrolase activity, acting on ester bonds	1.86E-02
26	GO:0008233: peptidase activity	2.11E-02
27	GO:0016787: hydrolase activity	2.47E-02
28	GO:0008289: lipid binding	3.58E-02

Rank	GO Term	Adjusted P value
1	GO:0009534: chloroplast thylakoid	2.68E-21
2	GO:0009535: chloroplast thylakoid membrane	8.75E-21
3	GO:0009579: thylakoid	7.28E-14
4	GO:0009507: chloroplast	2.13E-13
5	GO:0009941: chloroplast envelope	6.72E-07
6	GO:0010287: plastoglobule	1.20E-06
7	GO:0009543: chloroplast thylakoid lumen	1.35E-06
8	GO:0009522: photosystem I	1.37E-06
9	GO:0009515: granal stacked thylakoid	2.30E-05
10	GO:0045239: tricarboxylic acid cycle enzyme complex	2.30E-05
11	GO:0009570: chloroplast stroma	2.49E-05
12	GO:0030095: chloroplast photosystem II	2.72E-05
13	GO:0009654: photosystem II oxygen evolving complex	4.55E-05
14	GO:0030093: chloroplast photosystem I	5.89E-05
15	GO:0009528: plastid inner membrane	1.04E-04
16	GO:0019898: extrinsic component of membrane	1.06E-04
17	GO:0010319: stromule	1.50E-04
18	GO:0009527: plastid outer membrane	2.12E-04
19	GO:0009517: PSII associated light-harvesting complex II	2.12E-04
20	GO:0045263: proton-transporting ATP synthase complex, coupling factor F(o)	3.37E-04
21	GO:0031977: thylakoid lumen	3.42E-04
22	GO:0009538: photosystem I reaction center	5.46E-04
23	GO:0030076: light-harvesting complex	1.30E-03
24	GO:0009532: plastid stroma	1.70E-03
25	GO:0009523: photosystem II	2.60E-03
26	GO:0016021: integral component of membrane	3.77E-03
27	GO:0009707: chloroplast outer membrane	4.17E-03
28	GO:0031969: chloroplast membrane	2.14E-02
29	GO:0016020: membrane	3.55E-02
30	GO:0048046: apoplast	4.18E-02