Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G46390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043201: response to leucine0.00E+00
2GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
3GO:0080052: response to histidine0.00E+00
4GO:0080053: response to phenylalanine0.00E+00
5GO:0002376: immune system process0.00E+00
6GO:0010360: negative regulation of anion channel activity0.00E+00
7GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
8GO:0006097: glyoxylate cycle6.50E-06
9GO:0030091: protein repair2.62E-05
10GO:0051938: L-glutamate import6.10E-05
11GO:1990641: response to iron ion starvation6.10E-05
12GO:1902361: mitochondrial pyruvate transmembrane transport6.10E-05
13GO:0046244: salicylic acid catabolic process6.10E-05
14GO:0080093: regulation of photorespiration6.10E-05
15GO:0031998: regulation of fatty acid beta-oxidation6.10E-05
16GO:0034975: protein folding in endoplasmic reticulum6.10E-05
17GO:0055114: oxidation-reduction process9.80E-05
18GO:0044419: interspecies interaction between organisms1.48E-04
19GO:0006101: citrate metabolic process1.48E-04
20GO:0006850: mitochondrial pyruvate transport1.48E-04
21GO:0042939: tripeptide transport1.48E-04
22GO:0043091: L-arginine import1.48E-04
23GO:0015802: basic amino acid transport1.48E-04
24GO:0002239: response to oomycetes3.65E-04
25GO:0010116: positive regulation of abscisic acid biosynthetic process3.65E-04
26GO:0042938: dipeptide transport4.88E-04
27GO:0034052: positive regulation of plant-type hypersensitive response6.19E-04
28GO:0000304: response to singlet oxygen6.19E-04
29GO:0009697: salicylic acid biosynthetic process6.19E-04
30GO:0006564: L-serine biosynthetic process6.19E-04
31GO:0006014: D-ribose metabolic process7.57E-04
32GO:0006120: mitochondrial electron transport, NADH to ubiquinone9.01E-04
33GO:0006099: tricarboxylic acid cycle9.99E-04
34GO:1902074: response to salt1.05E-03
35GO:2000070: regulation of response to water deprivation1.21E-03
36GO:0006102: isocitrate metabolic process1.21E-03
37GO:0045454: cell redox homeostasis1.30E-03
38GO:0030968: endoplasmic reticulum unfolded protein response1.38E-03
39GO:0009808: lignin metabolic process1.38E-03
40GO:0046685: response to arsenic-containing substance1.55E-03
41GO:0010112: regulation of systemic acquired resistance1.55E-03
42GO:0032259: methylation1.60E-03
43GO:0009751: response to salicylic acid1.66E-03
44GO:0042742: defense response to bacterium1.71E-03
45GO:0043067: regulation of programmed cell death1.73E-03
46GO:0009688: abscisic acid biosynthetic process1.92E-03
47GO:0009807: lignan biosynthetic process2.12E-03
48GO:0006108: malate metabolic process2.52E-03
49GO:0000162: tryptophan biosynthetic process3.18E-03
50GO:0034976: response to endoplasmic reticulum stress3.18E-03
51GO:0046686: response to cadmium ion3.34E-03
52GO:0006468: protein phosphorylation3.55E-03
53GO:0009695: jasmonic acid biosynthetic process3.65E-03
54GO:0031408: oxylipin biosynthetic process3.89E-03
55GO:0003333: amino acid transmembrane transport3.89E-03
56GO:0016998: cell wall macromolecule catabolic process3.89E-03
57GO:0031348: negative regulation of defense response4.15E-03
58GO:0019748: secondary metabolic process4.15E-03
59GO:0019252: starch biosynthetic process6.03E-03
60GO:0009851: auxin biosynthetic process6.03E-03
61GO:0002229: defense response to oomycetes6.32E-03
62GO:0000302: response to reactive oxygen species6.32E-03
63GO:0010252: auxin homeostasis7.21E-03
64GO:0006464: cellular protein modification process7.21E-03
65GO:0006979: response to oxidative stress8.60E-03
66GO:0009627: systemic acquired resistance8.81E-03
67GO:0009407: toxin catabolic process1.05E-02
68GO:0010043: response to zinc ion1.09E-02
69GO:0045087: innate immune response1.16E-02
70GO:0051707: response to other organism1.39E-02
71GO:0009636: response to toxic substance1.51E-02
72GO:0006855: drug transmembrane transport1.55E-02
73GO:0042538: hyperosmotic salinity response1.63E-02
74GO:0009809: lignin biosynthetic process1.71E-02
75GO:0051603: proteolysis involved in cellular protein catabolic process1.76E-02
76GO:0006857: oligopeptide transport1.80E-02
77GO:0006096: glycolytic process1.93E-02
78GO:0048316: seed development1.97E-02
79GO:0009626: plant-type hypersensitive response2.02E-02
80GO:0009620: response to fungus2.06E-02
81GO:0009624: response to nematode2.20E-02
82GO:0009737: response to abscisic acid2.22E-02
83GO:0009790: embryo development2.88E-02
84GO:0010150: leaf senescence3.25E-02
85GO:0007166: cell surface receptor signaling pathway3.57E-02
86GO:0009617: response to bacterium3.68E-02
87GO:0009651: response to salt stress3.90E-02
88GO:0006970: response to osmotic stress4.67E-02
RankGO TermAdjusted P value
1GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.44E-05
2GO:0004048: anthranilate phosphoribosyltransferase activity6.10E-05
3GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity6.10E-05
4GO:0004321: fatty-acyl-CoA synthase activity6.10E-05
5GO:0030611: arsenate reductase activity6.10E-05
6GO:0008794: arsenate reductase (glutaredoxin) activity7.32E-05
7GO:0004338: glucan exo-1,3-beta-glucosidase activity1.48E-04
8GO:0015036: disulfide oxidoreductase activity1.48E-04
9GO:0042937: tripeptide transporter activity1.48E-04
10GO:0004617: phosphoglycerate dehydrogenase activity1.48E-04
11GO:0003994: aconitate hydratase activity1.48E-04
12GO:0050833: pyruvate transmembrane transporter activity2.51E-04
13GO:0003756: protein disulfide isomerase activity2.64E-04
14GO:0015181: arginine transmembrane transporter activity3.65E-04
15GO:0015189: L-lysine transmembrane transporter activity3.65E-04
16GO:0005313: L-glutamate transmembrane transporter activity4.88E-04
17GO:0004031: aldehyde oxidase activity4.88E-04
18GO:0050302: indole-3-acetaldehyde oxidase activity4.88E-04
19GO:0010279: indole-3-acetic acid amido synthetase activity4.88E-04
20GO:0042936: dipeptide transporter activity4.88E-04
21GO:0005496: steroid binding6.19E-04
22GO:0030247: polysaccharide binding6.93E-04
23GO:0016615: malate dehydrogenase activity7.57E-04
24GO:0004747: ribokinase activity9.01E-04
25GO:0030060: L-malate dehydrogenase activity9.01E-04
26GO:0008113: peptide-methionine (S)-S-oxide reductase activity9.01E-04
27GO:0051920: peroxiredoxin activity9.01E-04
28GO:0051539: 4 iron, 4 sulfur cluster binding1.08E-03
29GO:0004364: glutathione transferase activity1.17E-03
30GO:0008865: fructokinase activity1.21E-03
31GO:0016209: antioxidant activity1.21E-03
32GO:0016207: 4-coumarate-CoA ligase activity1.55E-03
33GO:0071949: FAD binding1.55E-03
34GO:0004743: pyruvate kinase activity1.73E-03
35GO:0015174: basic amino acid transmembrane transporter activity1.73E-03
36GO:0030955: potassium ion binding1.73E-03
37GO:0009055: electron carrier activity1.84E-03
38GO:0016301: kinase activity1.84E-03
39GO:0008171: O-methyltransferase activity1.92E-03
40GO:0004129: cytochrome-c oxidase activity2.12E-03
41GO:0008559: xenobiotic-transporting ATPase activity2.12E-03
42GO:0015035: protein disulfide oxidoreductase activity2.36E-03
43GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.74E-03
44GO:0004725: protein tyrosine phosphatase activity3.18E-03
45GO:0004298: threonine-type endopeptidase activity3.89E-03
46GO:0008810: cellulase activity4.40E-03
47GO:0004674: protein serine/threonine kinase activity5.38E-03
48GO:0008168: methyltransferase activity5.84E-03
49GO:0048038: quinone binding6.32E-03
50GO:0008137: NADH dehydrogenase (ubiquinone) activity6.32E-03
51GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.91E-03
52GO:0016597: amino acid binding7.84E-03
53GO:0051213: dioxygenase activity8.16E-03
54GO:0008757: S-adenosylmethionine-dependent methyltransferase activity9.47E-03
55GO:0015238: drug transmembrane transporter activity1.02E-02
56GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.09E-02
57GO:0030145: manganese ion binding1.09E-02
58GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.16E-02
59GO:0016491: oxidoreductase activity1.21E-02
60GO:0051537: 2 iron, 2 sulfur cluster binding1.47E-02
61GO:0051287: NAD binding1.59E-02
62GO:0016298: lipase activity1.76E-02
63GO:0015171: amino acid transmembrane transporter activity1.84E-02
64GO:0045735: nutrient reservoir activity1.93E-02
65GO:0016874: ligase activity2.11E-02
66GO:0005507: copper ion binding2.82E-02
67GO:0015297: antiporter activity3.14E-02
68GO:0005509: calcium ion binding3.69E-02
69GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.85E-02
70GO:0000287: magnesium ion binding4.37E-02
71GO:0005215: transporter activity4.41E-02
72GO:0004601: peroxidase activity4.43E-02
73GO:0050660: flavin adenine dinucleotide binding4.91E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0031314: extrinsic component of mitochondrial inner membrane1.48E-04
3GO:0005746: mitochondrial respiratory chain6.19E-04
4GO:0005777: peroxisome7.30E-04
5GO:0000325: plant-type vacuole8.77E-04
6GO:0031305: integral component of mitochondrial inner membrane1.21E-03
7GO:0000326: protein storage vacuole1.38E-03
8GO:0005829: cytosol2.39E-03
9GO:0005783: endoplasmic reticulum2.90E-03
10GO:0005839: proteasome core complex3.89E-03
11GO:0046658: anchored component of plasma membrane5.19E-03
12GO:0005886: plasma membrane6.48E-03
13GO:0016021: integral component of membrane6.58E-03
14GO:0031969: chloroplast membrane7.51E-03
15GO:0005788: endoplasmic reticulum lumen8.48E-03
16GO:0009536: plastid1.10E-02
17GO:0048046: apoplast1.21E-02
18GO:0000502: proteasome complex1.71E-02
19GO:0005747: mitochondrial respiratory chain complex I1.97E-02
20GO:0005773: vacuole2.13E-02
21GO:0005759: mitochondrial matrix3.04E-02
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Gene type



Gene DE type





AT5G53870