GO Enrichment Analysis of Co-expressed Genes with
AT2G46280
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0017126: nucleologenesis | 0.00E+00 |
| 4 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.93E-07 |
| 5 | GO:0006099: tricarboxylic acid cycle | 3.18E-06 |
| 6 | GO:0046686: response to cadmium ion | 3.39E-05 |
| 7 | GO:0006102: isocitrate metabolic process | 3.42E-05 |
| 8 | GO:0015760: glucose-6-phosphate transport | 7.23E-05 |
| 9 | GO:1990641: response to iron ion starvation | 7.23E-05 |
| 10 | GO:2000232: regulation of rRNA processing | 7.23E-05 |
| 11 | GO:0043687: post-translational protein modification | 7.23E-05 |
| 12 | GO:0051775: response to redox state | 7.23E-05 |
| 13 | GO:0006390: transcription from mitochondrial promoter | 7.23E-05 |
| 14 | GO:0080120: CAAX-box protein maturation | 7.23E-05 |
| 15 | GO:0071586: CAAX-box protein processing | 7.23E-05 |
| 16 | GO:0010372: positive regulation of gibberellin biosynthetic process | 1.74E-04 |
| 17 | GO:0015712: hexose phosphate transport | 1.74E-04 |
| 18 | GO:0006101: citrate metabolic process | 1.74E-04 |
| 19 | GO:0034976: response to endoplasmic reticulum stress | 1.85E-04 |
| 20 | GO:0051302: regulation of cell division | 2.30E-04 |
| 21 | GO:0045039: protein import into mitochondrial inner membrane | 2.93E-04 |
| 22 | GO:0015714: phosphoenolpyruvate transport | 2.93E-04 |
| 23 | GO:0035436: triose phosphate transmembrane transport | 2.93E-04 |
| 24 | GO:0007276: gamete generation | 4.23E-04 |
| 25 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 4.23E-04 |
| 26 | GO:0006979: response to oxidative stress | 5.01E-04 |
| 27 | GO:0080156: mitochondrial mRNA modification | 5.15E-04 |
| 28 | GO:0051205: protein insertion into membrane | 5.65E-04 |
| 29 | GO:0015713: phosphoglycerate transport | 5.65E-04 |
| 30 | GO:0010109: regulation of photosynthesis | 5.65E-04 |
| 31 | GO:0009697: salicylic acid biosynthetic process | 7.14E-04 |
| 32 | GO:0018279: protein N-linked glycosylation via asparagine | 7.14E-04 |
| 33 | GO:0006097: glyoxylate cycle | 7.14E-04 |
| 34 | GO:0006461: protein complex assembly | 7.14E-04 |
| 35 | GO:0047484: regulation of response to osmotic stress | 8.73E-04 |
| 36 | GO:0009643: photosynthetic acclimation | 8.73E-04 |
| 37 | GO:0042372: phylloquinone biosynthetic process | 1.04E-03 |
| 38 | GO:0006458: 'de novo' protein folding | 1.04E-03 |
| 39 | GO:0042254: ribosome biogenesis | 1.08E-03 |
| 40 | GO:0009651: response to salt stress | 1.08E-03 |
| 41 | GO:0042773: ATP synthesis coupled electron transport | 1.21E-03 |
| 42 | GO:1902074: response to salt | 1.21E-03 |
| 43 | GO:0006457: protein folding | 1.22E-03 |
| 44 | GO:0006402: mRNA catabolic process | 1.40E-03 |
| 45 | GO:0050821: protein stabilization | 1.40E-03 |
| 46 | GO:0009744: response to sucrose | 1.51E-03 |
| 47 | GO:0045454: cell redox homeostasis | 1.72E-03 |
| 48 | GO:0098656: anion transmembrane transport | 1.80E-03 |
| 49 | GO:0006189: 'de novo' IMP biosynthetic process | 1.80E-03 |
| 50 | GO:0043067: regulation of programmed cell death | 2.01E-03 |
| 51 | GO:0006417: regulation of translation | 2.24E-03 |
| 52 | GO:0048316: seed development | 2.46E-03 |
| 53 | GO:0006412: translation | 2.56E-03 |
| 54 | GO:0006790: sulfur compound metabolic process | 2.70E-03 |
| 55 | GO:0006820: anion transport | 2.70E-03 |
| 56 | GO:0002213: defense response to insect | 2.70E-03 |
| 57 | GO:0006094: gluconeogenesis | 2.94E-03 |
| 58 | GO:0034605: cellular response to heat | 3.19E-03 |
| 59 | GO:0046854: phosphatidylinositol phosphorylation | 3.44E-03 |
| 60 | GO:0009409: response to cold | 3.82E-03 |
| 61 | GO:0006487: protein N-linked glycosylation | 3.98E-03 |
| 62 | GO:0009790: embryo development | 4.16E-03 |
| 63 | GO:0061077: chaperone-mediated protein folding | 4.54E-03 |
| 64 | GO:0031348: negative regulation of defense response | 4.83E-03 |
| 65 | GO:0009306: protein secretion | 5.43E-03 |
| 66 | GO:0009617: response to bacterium | 5.86E-03 |
| 67 | GO:0008033: tRNA processing | 6.05E-03 |
| 68 | GO:0010501: RNA secondary structure unwinding | 6.05E-03 |
| 69 | GO:0000413: protein peptidyl-prolyl isomerization | 6.05E-03 |
| 70 | GO:0010118: stomatal movement | 6.05E-03 |
| 71 | GO:0010154: fruit development | 6.38E-03 |
| 72 | GO:0048868: pollen tube development | 6.38E-03 |
| 73 | GO:0009749: response to glucose | 7.04E-03 |
| 74 | GO:0031047: gene silencing by RNA | 7.72E-03 |
| 75 | GO:0009567: double fertilization forming a zygote and endosperm | 8.43E-03 |
| 76 | GO:0009793: embryo development ending in seed dormancy | 8.60E-03 |
| 77 | GO:0009627: systemic acquired resistance | 1.03E-02 |
| 78 | GO:0016311: dephosphorylation | 1.11E-02 |
| 79 | GO:0009817: defense response to fungus, incompatible interaction | 1.15E-02 |
| 80 | GO:0048481: plant ovule development | 1.15E-02 |
| 81 | GO:0009407: toxin catabolic process | 1.23E-02 |
| 82 | GO:0010043: response to zinc ion | 1.27E-02 |
| 83 | GO:0007568: aging | 1.27E-02 |
| 84 | GO:0009853: photorespiration | 1.36E-02 |
| 85 | GO:0042542: response to hydrogen peroxide | 1.58E-02 |
| 86 | GO:0042546: cell wall biogenesis | 1.67E-02 |
| 87 | GO:0000154: rRNA modification | 1.77E-02 |
| 88 | GO:0009636: response to toxic substance | 1.77E-02 |
| 89 | GO:0009846: pollen germination | 1.91E-02 |
| 90 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.06E-02 |
| 91 | GO:0006096: glycolytic process | 2.26E-02 |
| 92 | GO:0009555: pollen development | 2.48E-02 |
| 93 | GO:0009553: embryo sac development | 2.53E-02 |
| 94 | GO:0009624: response to nematode | 2.58E-02 |
| 95 | GO:0006396: RNA processing | 2.64E-02 |
| 96 | GO:0006413: translational initiation | 3.63E-02 |
| 97 | GO:0007166: cell surface receptor signaling pathway | 4.19E-02 |
| 98 | GO:0006508: proteolysis | 4.62E-02 |
| 99 | GO:0042742: defense response to bacterium | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.93E-07 |
| 3 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.93E-07 |
| 4 | GO:0005507: copper ion binding | 2.79E-06 |
| 5 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 8.65E-06 |
| 6 | GO:0048037: cofactor binding | 7.23E-05 |
| 7 | GO:0008909: isochorismate synthase activity | 7.23E-05 |
| 8 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 7.23E-05 |
| 9 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 7.23E-05 |
| 10 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.04E-04 |
| 11 | GO:0015152: glucose-6-phosphate transmembrane transporter activity | 1.74E-04 |
| 12 | GO:0043021: ribonucleoprotein complex binding | 1.74E-04 |
| 13 | GO:0003994: aconitate hydratase activity | 1.74E-04 |
| 14 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.93E-04 |
| 15 | GO:0019003: GDP binding | 2.93E-04 |
| 16 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 2.93E-04 |
| 17 | GO:0071917: triose-phosphate transmembrane transporter activity | 2.93E-04 |
| 18 | GO:0070180: large ribosomal subunit rRNA binding | 2.93E-04 |
| 19 | GO:0003756: protein disulfide isomerase activity | 3.31E-04 |
| 20 | GO:0003735: structural constituent of ribosome | 3.79E-04 |
| 21 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 4.23E-04 |
| 22 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 4.23E-04 |
| 23 | GO:0004576: oligosaccharyl transferase activity | 5.65E-04 |
| 24 | GO:0015120: phosphoglycerate transmembrane transporter activity | 5.65E-04 |
| 25 | GO:0000166: nucleotide binding | 8.35E-04 |
| 26 | GO:0004004: ATP-dependent RNA helicase activity | 8.59E-04 |
| 27 | GO:0003729: mRNA binding | 9.92E-04 |
| 28 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.04E-03 |
| 29 | GO:0003697: single-stranded DNA binding | 1.18E-03 |
| 30 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 1.21E-03 |
| 31 | GO:0030515: snoRNA binding | 1.21E-03 |
| 32 | GO:0008233: peptidase activity | 1.35E-03 |
| 33 | GO:0015288: porin activity | 1.40E-03 |
| 34 | GO:0008308: voltage-gated anion channel activity | 1.59E-03 |
| 35 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.63E-03 |
| 36 | GO:0003723: RNA binding | 1.74E-03 |
| 37 | GO:0051287: NAD binding | 1.82E-03 |
| 38 | GO:0004129: cytochrome-c oxidase activity | 2.46E-03 |
| 39 | GO:0044183: protein binding involved in protein folding | 2.46E-03 |
| 40 | GO:0005524: ATP binding | 2.48E-03 |
| 41 | GO:0051082: unfolded protein binding | 2.86E-03 |
| 42 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.94E-03 |
| 43 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.94E-03 |
| 44 | GO:0004386: helicase activity | 3.12E-03 |
| 45 | GO:0004175: endopeptidase activity | 3.19E-03 |
| 46 | GO:0004190: aspartic-type endopeptidase activity | 3.44E-03 |
| 47 | GO:0051536: iron-sulfur cluster binding | 3.98E-03 |
| 48 | GO:0003954: NADH dehydrogenase activity | 3.98E-03 |
| 49 | GO:0004298: threonine-type endopeptidase activity | 4.54E-03 |
| 50 | GO:0003713: transcription coactivator activity | 6.38E-03 |
| 51 | GO:0016853: isomerase activity | 6.70E-03 |
| 52 | GO:0010181: FMN binding | 6.70E-03 |
| 53 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 7.38E-03 |
| 54 | GO:0004518: nuclease activity | 7.72E-03 |
| 55 | GO:0046872: metal ion binding | 7.99E-03 |
| 56 | GO:0008237: metallopeptidase activity | 8.79E-03 |
| 57 | GO:0030247: polysaccharide binding | 1.07E-02 |
| 58 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.11E-02 |
| 59 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.15E-02 |
| 60 | GO:0004222: metalloendopeptidase activity | 1.23E-02 |
| 61 | GO:0050897: cobalt ion binding | 1.27E-02 |
| 62 | GO:0003746: translation elongation factor activity | 1.36E-02 |
| 63 | GO:0003924: GTPase activity | 1.39E-02 |
| 64 | GO:0050661: NADP binding | 1.49E-02 |
| 65 | GO:0004364: glutathione transferase activity | 1.58E-02 |
| 66 | GO:0043621: protein self-association | 1.72E-02 |
| 67 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.81E-02 |
| 68 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.01E-02 |
| 69 | GO:0015035: protein disulfide oxidoreductase activity | 2.64E-02 |
| 70 | GO:0008026: ATP-dependent helicase activity | 2.69E-02 |
| 71 | GO:0016829: lyase activity | 3.20E-02 |
| 72 | GO:0015297: antiporter activity | 3.69E-02 |
| 73 | GO:0005525: GTP binding | 4.06E-02 |
| 74 | GO:0003743: translation initiation factor activity | 4.26E-02 |
| 75 | GO:0005509: calcium ion binding | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 3 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 4 | GO:0005783: endoplasmic reticulum | 2.92E-07 |
| 5 | GO:0070545: PeBoW complex | 2.93E-07 |
| 6 | GO:0008250: oligosaccharyltransferase complex | 8.65E-06 |
| 7 | GO:0016442: RISC complex | 7.23E-05 |
| 8 | GO:0034245: mitochondrial DNA-directed RNA polymerase complex | 7.23E-05 |
| 9 | GO:0005739: mitochondrion | 1.63E-04 |
| 10 | GO:0005774: vacuolar membrane | 2.84E-04 |
| 11 | GO:0005853: eukaryotic translation elongation factor 1 complex | 2.93E-04 |
| 12 | GO:0005829: cytosol | 2.98E-04 |
| 13 | GO:0030660: Golgi-associated vesicle membrane | 5.65E-04 |
| 14 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 5.65E-04 |
| 15 | GO:0005746: mitochondrial respiratory chain | 7.14E-04 |
| 16 | GO:0005788: endoplasmic reticulum lumen | 7.74E-04 |
| 17 | GO:0031428: box C/D snoRNP complex | 8.73E-04 |
| 18 | GO:0032588: trans-Golgi network membrane | 8.73E-04 |
| 19 | GO:0005762: mitochondrial large ribosomal subunit | 1.04E-03 |
| 20 | GO:0030687: preribosome, large subunit precursor | 1.21E-03 |
| 21 | GO:0005730: nucleolus | 1.24E-03 |
| 22 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.40E-03 |
| 23 | GO:0022625: cytosolic large ribosomal subunit | 1.46E-03 |
| 24 | GO:0000326: protein storage vacuole | 1.59E-03 |
| 25 | GO:0046930: pore complex | 1.59E-03 |
| 26 | GO:0031901: early endosome membrane | 1.80E-03 |
| 27 | GO:0010494: cytoplasmic stress granule | 1.80E-03 |
| 28 | GO:0005740: mitochondrial envelope | 2.23E-03 |
| 29 | GO:0005765: lysosomal membrane | 2.46E-03 |
| 30 | GO:0005747: mitochondrial respiratory chain complex I | 2.46E-03 |
| 31 | GO:0048471: perinuclear region of cytoplasm | 2.46E-03 |
| 32 | GO:0005834: heterotrimeric G-protein complex | 2.54E-03 |
| 33 | GO:0005840: ribosome | 2.59E-03 |
| 34 | GO:0005773: vacuole | 2.66E-03 |
| 35 | GO:0032040: small-subunit processome | 2.70E-03 |
| 36 | GO:0005750: mitochondrial respiratory chain complex III | 3.19E-03 |
| 37 | GO:0030176: integral component of endoplasmic reticulum membrane | 3.44E-03 |
| 38 | GO:0043234: protein complex | 3.71E-03 |
| 39 | GO:0045271: respiratory chain complex I | 4.26E-03 |
| 40 | GO:0005839: proteasome core complex | 4.54E-03 |
| 41 | GO:0005741: mitochondrial outer membrane | 4.54E-03 |
| 42 | GO:0000932: P-body | 9.54E-03 |
| 43 | GO:0015934: large ribosomal subunit | 1.27E-02 |
| 44 | GO:0009505: plant-type cell wall | 1.51E-02 |
| 45 | GO:0005886: plasma membrane | 1.55E-02 |
| 46 | GO:0009507: chloroplast | 1.65E-02 |
| 47 | GO:0048046: apoplast | 1.70E-02 |
| 48 | GO:0031966: mitochondrial membrane | 1.91E-02 |
| 49 | GO:0005789: endoplasmic reticulum membrane | 1.94E-02 |
| 50 | GO:0000502: proteasome complex | 2.01E-02 |
| 51 | GO:0005635: nuclear envelope | 2.11E-02 |
| 52 | GO:0005654: nucleoplasm | 2.97E-02 |
| 53 | GO:0005759: mitochondrial matrix | 3.56E-02 |
| 54 | GO:0009506: plasmodesma | 4.28E-02 |