co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G46270

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006858: extracellular transport	0.00E+00
2	GO:0048227: plasma membrane to endosome transport	0.00E+00
3	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
4	GO:0001881: receptor recycling	0.00E+00
5	GO:0006182: cGMP biosynthetic process	0.00E+00
6	GO:0032780: negative regulation of ATPase activity	0.00E+00
7	GO:0006482: protein demethylation	0.00E+00
8	GO:0080173: male-female gamete recognition during double fertilization	1.37E-04
9	GO:0006569: tryptophan catabolic process	1.37E-04
10	GO:0034214: protein hexamerization	1.37E-04
11	GO:0060862: negative regulation of floral organ abscission	1.37E-04
12	GO:0006805: xenobiotic metabolic process	1.37E-04
13	GO:0000103: sulfate assimilation	2.04E-04
14	GO:0019521: D-gluconate metabolic process	3.16E-04
15	GO:0019374: galactolipid metabolic process	3.16E-04
16	GO:0007584: response to nutrient	3.16E-04
17	GO:0030010: establishment of cell polarity	3.16E-04
18	GO:0031349: positive regulation of defense response	3.16E-04
19	GO:1902000: homogentisate catabolic process	3.16E-04
20	GO:0019441: tryptophan catabolic process to kynurenine	3.16E-04
21	GO:0097054: L-glutamate biosynthetic process	3.16E-04
22	GO:1905182: positive regulation of urease activity	3.16E-04
23	GO:0055114: oxidation-reduction process	3.20E-04
24	GO:0010053: root epidermal cell differentiation	3.99E-04
25	GO:0009072: aromatic amino acid family metabolic process	5.20E-04
26	GO:0010498: proteasomal protein catabolic process	5.20E-04
27	GO:0008333: endosome to lysosome transport	5.20E-04
28	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	5.20E-04
29	GO:1900140: regulation of seedling development	5.20E-04
30	GO:0010359: regulation of anion channel activity	5.20E-04
31	GO:0051603: proteolysis involved in cellular protein catabolic process	6.16E-04
32	GO:0006537: glutamate biosynthetic process	7.44E-04
33	GO:0010255: glucose mediated signaling pathway	7.44E-04
34	GO:0001676: long-chain fatty acid metabolic process	7.44E-04
35	GO:0048194: Golgi vesicle budding	7.44E-04
36	GO:0009620: response to fungus	8.18E-04
37	GO:0042147: retrograde transport, endosome to Golgi	8.29E-04
38	GO:0010118: stomatal movement	8.93E-04
39	GO:0010363: regulation of plant-type hypersensitive response	9.85E-04
40	GO:0010107: potassium ion import	9.85E-04
41	GO:0006878: cellular copper ion homeostasis	9.85E-04
42	GO:0019676: ammonia assimilation cycle	9.85E-04
43	GO:0060548: negative regulation of cell death	9.85E-04
44	GO:0006623: protein targeting to vacuole	1.10E-03
45	GO:0006891: intra-Golgi vesicle-mediated transport	1.17E-03
46	GO:0007264: small GTPase mediated signal transduction	1.25E-03
47	GO:0030308: negative regulation of cell growth	1.25E-03
48	GO:0006468: protein phosphorylation	1.51E-03
49	GO:0070814: hydrogen sulfide biosynthetic process	1.53E-03
50	GO:1902456: regulation of stomatal opening	1.53E-03
51	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.53E-03
52	GO:0010942: positive regulation of cell death	1.53E-03
53	GO:0006751: glutathione catabolic process	1.53E-03
54	GO:0048280: vesicle fusion with Golgi apparatus	1.83E-03
55	GO:0010555: response to mannitol	1.83E-03
56	GO:2000067: regulation of root morphogenesis	1.83E-03
57	GO:0043090: amino acid import	2.15E-03
58	GO:0050790: regulation of catalytic activity	2.15E-03
59	GO:0006401: RNA catabolic process	2.15E-03
60	GO:0006955: immune response	2.15E-03
61	GO:0009617: response to bacterium	2.26E-03
62	GO:0006499: N-terminal protein myristoylation	2.40E-03
63	GO:0016559: peroxisome fission	2.49E-03
64	GO:0006644: phospholipid metabolic process	2.49E-03
65	GO:0006002: fructose 6-phosphate metabolic process	2.85E-03
66	GO:0009880: embryonic pattern specification	2.85E-03
67	GO:0007186: G-protein coupled receptor signaling pathway	2.85E-03
68	GO:0010120: camalexin biosynthetic process	2.85E-03
69	GO:0017004: cytochrome complex assembly	2.85E-03
70	GO:0006098: pentose-phosphate shunt	3.22E-03
71	GO:0009821: alkaloid biosynthetic process	3.22E-03
72	GO:0090305: nucleic acid phosphodiester bond hydrolysis	3.22E-03
73	GO:0006631: fatty acid metabolic process	3.26E-03
74	GO:0006897: endocytosis	3.26E-03
75	GO:0048268: clathrin coat assembly	3.60E-03
76	GO:0042761: very long-chain fatty acid biosynthetic process	3.60E-03
77	GO:0006896: Golgi to vacuole transport	4.00E-03
78	GO:0019538: protein metabolic process	4.00E-03
79	GO:0043069: negative regulation of programmed cell death	4.00E-03
80	GO:0010629: negative regulation of gene expression	4.00E-03
81	GO:0006855: drug transmembrane transport	4.12E-03
82	GO:0009682: induced systemic resistance	4.42E-03
83	GO:0052544: defense response by callose deposition in cell wall	4.42E-03
84	GO:0043085: positive regulation of catalytic activity	4.42E-03
85	GO:0009750: response to fructose	4.42E-03
86	GO:0030148: sphingolipid biosynthetic process	4.42E-03
87	GO:0009684: indoleacetic acid biosynthetic process	4.42E-03
88	GO:0009809: lignin biosynthetic process	4.75E-03
89	GO:0000266: mitochondrial fission	4.85E-03
90	GO:0006508: proteolysis	5.16E-03
91	GO:0006807: nitrogen compound metabolic process	5.30E-03
92	GO:0002237: response to molecule of bacterial origin	5.76E-03
93	GO:0007034: vacuolar transport	5.76E-03
94	GO:0042343: indole glucosinolate metabolic process	6.23E-03
95	GO:0070588: calcium ion transmembrane transport	6.23E-03
96	GO:0009751: response to salicylic acid	6.63E-03
97	GO:0006071: glycerol metabolic process	6.71E-03
98	GO:0016575: histone deacetylation	7.73E-03
99	GO:0061077: chaperone-mediated protein folding	8.26E-03
100	GO:0098542: defense response to other organism	8.26E-03
101	GO:0030433: ubiquitin-dependent ERAD pathway	8.79E-03
102	GO:0007005: mitochondrion organization	8.79E-03
103	GO:0009625: response to insect	9.35E-03
104	GO:0010584: pollen exine formation	9.92E-03
105	GO:0042631: cellular response to water deprivation	1.11E-02
106	GO:0071472: cellular response to salt stress	1.17E-02
107	GO:0006662: glycerol ether metabolic process	1.17E-02
108	GO:0009749: response to glucose	1.29E-02
109	GO:0007166: cell surface receptor signaling pathway	1.34E-02
110	GO:0002229: defense response to oomycetes	1.36E-02
111	GO:0010193: response to ozone	1.36E-02
112	GO:0010583: response to cyclopentenone	1.42E-02
113	GO:0019761: glucosinolate biosynthetic process	1.42E-02
114	GO:0009630: gravitropism	1.42E-02
115	GO:0035556: intracellular signal transduction	1.50E-02
116	GO:0006464: cellular protein modification process	1.55E-02
117	GO:0009615: response to virus	1.76E-02
118	GO:0006888: ER to Golgi vesicle-mediated transport	1.98E-02
119	GO:0006950: response to stress	1.98E-02
120	GO:0009723: response to ethylene	2.10E-02
121	GO:0008219: cell death	2.12E-02
122	GO:0009407: toxin catabolic process	2.28E-02
123	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.33E-02
124	GO:0010200: response to chitin	2.33E-02
125	GO:0048527: lateral root development	2.36E-02
126	GO:0010119: regulation of stomatal movement	2.36E-02
127	GO:0010043: response to zinc ion	2.36E-02
128	GO:0007568: aging	2.36E-02
129	GO:0006865: amino acid transport	2.43E-02
130	GO:0034599: cellular response to oxidative stress	2.60E-02
131	GO:0045454: cell redox homeostasis	2.70E-02
132	GO:0009744: response to sucrose	3.01E-02
133	GO:0051707: response to other organism	3.01E-02
134	GO:0009636: response to toxic substance	3.27E-02
135	GO:0009414: response to water deprivation	3.30E-02
136	GO:0042742: defense response to bacterium	3.39E-02
137	GO:0006979: response to oxidative stress	3.43E-02
138	GO:0031347: regulation of defense response	3.45E-02
139	GO:0009846: pollen germination	3.54E-02
140	GO:0042538: hyperosmotic salinity response	3.54E-02
141	GO:0009736: cytokinin-activated signaling pathway	3.72E-02
142	GO:0006096: glycolytic process	4.19E-02
143	GO:0006952: defense response	4.35E-02
144	GO:0050832: defense response to fungus	4.55E-02
145	GO:0015031: protein transport	4.56E-02
146	GO:0009734: auxin-activated signaling pathway	4.66E-02
147	GO:0009553: embryo sac development	4.68E-02
148	GO:0009624: response to nematode	4.78E-02
149	GO:0018105: peptidyl-serine phosphorylation	4.88E-02
150	GO:0006396: RNA processing	4.88E-02
151	GO:0009742: brassinosteroid mediated signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0070577: lysine-acetylated histone binding	0.00E+00
3	GO:0015930: glutamate synthase activity	0.00E+00
4	GO:0051723: protein methylesterase activity	0.00E+00
5	GO:0042030: ATPase inhibitor activity	0.00E+00
6	GO:0016504: peptidase activator activity	0.00E+00
7	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
8	GO:0004713: protein tyrosine kinase activity	4.13E-08
9	GO:0005093: Rab GDP-dissociation inhibitor activity	3.53E-06
10	GO:0102391: decanoate--CoA ligase activity	5.36E-05
11	GO:0004467: long-chain fatty acid-CoA ligase activity	7.18E-05
12	GO:0052747: sinapyl alcohol dehydrogenase activity	9.31E-05
13	GO:0004714: transmembrane receptor protein tyrosine kinase activity	9.31E-05
14	GO:0005524: ATP binding	1.14E-04
15	GO:0051669: fructan beta-fructosidase activity	1.37E-04
16	GO:0031219: levanase activity	1.37E-04
17	GO:0016041: glutamate synthase (ferredoxin) activity	1.37E-04
18	GO:0045551: cinnamyl-alcohol dehydrogenase activity	2.75E-04
19	GO:0045140: inositol phosphoceramide synthase activity	3.16E-04
20	GO:0004061: arylformamidase activity	3.16E-04
21	GO:0015036: disulfide oxidoreductase activity	3.16E-04
22	GO:0008517: folic acid transporter activity	3.16E-04
23	GO:0031683: G-protein beta/gamma-subunit complex binding	5.20E-04
24	GO:0003840: gamma-glutamyltransferase activity	5.20E-04
25	GO:0036374: glutathione hydrolase activity	5.20E-04
26	GO:0004383: guanylate cyclase activity	5.20E-04
27	GO:0004781: sulfate adenylyltransferase (ATP) activity	5.20E-04
28	GO:0016805: dipeptidase activity	5.20E-04
29	GO:0001664: G-protein coupled receptor binding	5.20E-04
30	GO:0016151: nickel cation binding	5.20E-04
31	GO:0008234: cysteine-type peptidase activity	6.69E-04
32	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	7.44E-04
33	GO:0016491: oxidoreductase activity	9.74E-04
34	GO:0070628: proteasome binding	9.85E-04
35	GO:0004301: epoxide hydrolase activity	9.85E-04
36	GO:0005496: steroid binding	1.25E-03
37	GO:0051538: 3 iron, 4 sulfur cluster binding	1.25E-03
38	GO:0004197: cysteine-type endopeptidase activity	1.25E-03
39	GO:0036402: proteasome-activating ATPase activity	1.53E-03
40	GO:0004012: phospholipid-translocating ATPase activity	1.83E-03
41	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.83E-03
42	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.83E-03
43	GO:0005515: protein binding	2.14E-03
44	GO:0008235: metalloexopeptidase activity	2.15E-03
45	GO:0003872: 6-phosphofructokinase activity	2.15E-03
46	GO:0004620: phospholipase activity	2.15E-03
47	GO:0005096: GTPase activator activity	2.29E-03
48	GO:0005267: potassium channel activity	2.85E-03
49	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	2.85E-03
50	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.00E-03
51	GO:0008889: glycerophosphodiester phosphodiesterase activity	3.22E-03
52	GO:0047617: acyl-CoA hydrolase activity	3.60E-03
53	GO:0016844: strictosidine synthase activity	3.60E-03
54	GO:0005545: 1-phosphatidylinositol binding	4.00E-03
55	GO:0008794: arsenate reductase (glutaredoxin) activity	4.42E-03
56	GO:0004177: aminopeptidase activity	4.42E-03
57	GO:0008559: xenobiotic-transporting ATPase activity	4.42E-03
58	GO:0004674: protein serine/threonine kinase activity	4.42E-03
59	GO:0005388: calcium-transporting ATPase activity	5.30E-03
60	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	5.30E-03
61	GO:0005262: calcium channel activity	5.30E-03
62	GO:0017025: TBP-class protein binding	6.23E-03
63	GO:0004190: aspartic-type endopeptidase activity	6.23E-03
64	GO:0015035: protein disulfide oxidoreductase activity	6.96E-03
65	GO:0005528: FK506 binding	7.22E-03
66	GO:0003954: NADH dehydrogenase activity	7.22E-03
67	GO:0004407: histone deacetylase activity	7.22E-03
68	GO:0043424: protein histidine kinase binding	7.73E-03
69	GO:0005509: calcium ion binding	8.04E-03
70	GO:0004298: threonine-type endopeptidase activity	8.26E-03
71	GO:0033612: receptor serine/threonine kinase binding	8.26E-03
72	GO:0047134: protein-disulfide reductase activity	1.05E-02
73	GO:0030276: clathrin binding	1.17E-02
74	GO:0016887: ATPase activity	1.18E-02
75	GO:0010181: FMN binding	1.23E-02
76	GO:0004791: thioredoxin-disulfide reductase activity	1.23E-02
77	GO:0004872: receptor activity	1.29E-02
78	GO:0004518: nuclease activity	1.42E-02
79	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.49E-02
80	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.49E-02
81	GO:0008483: transaminase activity	1.62E-02
82	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.90E-02
83	GO:0030247: polysaccharide binding	1.98E-02
84	GO:0004683: calmodulin-dependent protein kinase activity	1.98E-02
85	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.05E-02
86	GO:0015238: drug transmembrane transporter activity	2.20E-02
87	GO:0005516: calmodulin binding	2.35E-02
88	GO:0030145: manganese ion binding	2.36E-02
89	GO:0016301: kinase activity	2.53E-02
90	GO:0000149: SNARE binding	2.68E-02
91	GO:0004871: signal transducer activity	2.83E-02
92	GO:0016787: hydrolase activity	2.84E-02
93	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.91E-02
94	GO:0004364: glutathione transferase activity	2.93E-02
95	GO:0005484: SNAP receptor activity	3.01E-02
96	GO:0015293: symporter activity	3.27E-02
97	GO:0003924: GTPase activity	3.32E-02
98	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.36E-02
99	GO:0005215: transporter activity	3.84E-02
100	GO:0015171: amino acid transmembrane transporter activity	4.00E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005773: vacuole	7.35E-06
3	GO:0005829: cytosol	4.25E-05
4	GO:0005777: peroxisome	1.68E-04
5	GO:0005886: plasma membrane	1.85E-04
6	GO:0031304: intrinsic component of mitochondrial inner membrane	3.16E-04
7	GO:0031314: extrinsic component of mitochondrial inner membrane	3.16E-04
8	GO:0005764: lysosome	3.55E-04
9	GO:0005839: proteasome core complex	5.96E-04
10	GO:0005945: 6-phosphofructokinase complex	1.25E-03
11	GO:0030904: retromer complex	1.53E-03
12	GO:0030140: trans-Golgi network transport vesicle	1.53E-03
13	GO:0005771: multivesicular body	1.53E-03
14	GO:0031597: cytosolic proteasome complex	1.83E-03
15	GO:0031595: nuclear proteasome complex	2.15E-03
16	GO:0012507: ER to Golgi transport vesicle membrane	2.49E-03
17	GO:0000325: plant-type vacuole	2.51E-03
18	GO:0031902: late endosome membrane	3.26E-03
19	GO:0008540: proteasome regulatory particle, base subcomplex	3.60E-03
20	GO:0000502: proteasome complex	4.75E-03
21	GO:0005795: Golgi stack	6.23E-03
22	GO:0005741: mitochondrial outer membrane	8.26E-03
23	GO:0005905: clathrin-coated pit	8.26E-03
24	GO:0005783: endoplasmic reticulum	9.36E-03
25	GO:0030136: clathrin-coated vesicle	1.05E-02
26	GO:0005770: late endosome	1.17E-02
27	GO:0005794: Golgi apparatus	1.27E-02
28	GO:0019898: extrinsic component of membrane	1.29E-02
29	GO:0005615: extracellular space	1.31E-02
30	GO:0005778: peroxisomal membrane	1.62E-02
31	GO:0030529: intracellular ribonucleoprotein complex	1.76E-02
32	GO:0005774: vacuolar membrane	1.99E-02
33	GO:0005802: trans-Golgi network	2.54E-02
34	GO:0031201: SNARE complex	2.84E-02
35	GO:0005743: mitochondrial inner membrane	3.09E-02
36	GO:0016021: integral component of membrane	3.40E-02
37	GO:0010008: endosome membrane	4.29E-02
38	GO:0016020: membrane	4.38E-02
39	GO:0005834: heterotrimeric G-protein complex	4.39E-02
40	GO:0009706: chloroplast inner membrane	4.78E-02