GO Enrichment Analysis of Co-expressed Genes with
AT2G46260
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034728: nucleosome organization | 2.75E-06 |
| 2 | GO:0097298: regulation of nucleus size | 2.75E-06 |
| 3 | GO:1900036: positive regulation of cellular response to heat | 2.75E-06 |
| 4 | GO:0016584: nucleosome positioning | 7.70E-06 |
| 5 | GO:0043044: ATP-dependent chromatin remodeling | 1.45E-05 |
| 6 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 5.52E-05 |
| 7 | GO:0006997: nucleus organization | 1.11E-04 |
| 8 | GO:0010206: photosystem II repair | 1.27E-04 |
| 9 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.44E-04 |
| 10 | GO:0005982: starch metabolic process | 1.44E-04 |
| 11 | GO:0008299: isoprenoid biosynthetic process | 3.11E-04 |
| 12 | GO:0006366: transcription from RNA polymerase II promoter | 3.32E-04 |
| 13 | GO:0048511: rhythmic process | 3.32E-04 |
| 14 | GO:0009561: megagametogenesis | 3.94E-04 |
| 15 | GO:0042752: regulation of circadian rhythm | 4.82E-04 |
| 16 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 5.27E-04 |
| 17 | GO:0032502: developmental process | 5.50E-04 |
| 18 | GO:0030163: protein catabolic process | 5.74E-04 |
| 19 | GO:0016049: cell growth | 7.68E-04 |
| 20 | GO:0016569: covalent chromatin modification | 1.59E-03 |
| 21 | GO:0009553: embryo sac development | 1.63E-03 |
| 22 | GO:0010228: vegetative to reproductive phase transition of meristem | 2.46E-03 |
| 23 | GO:0009617: response to bacterium | 2.69E-03 |
| 24 | GO:0046777: protein autophosphorylation | 3.88E-03 |
| 25 | GO:0009908: flower development | 6.71E-03 |
| 26 | GO:0009735: response to cytokinin | 6.76E-03 |
| 27 | GO:0009414: response to water deprivation | 1.16E-02 |
| 28 | GO:0006979: response to oxidative stress | 1.19E-02 |
| 29 | GO:0009737: response to abscisic acid | 2.02E-02 |
| 30 | GO:0016310: phosphorylation | 2.23E-02 |
| 31 | GO:0006508: proteolysis | 2.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 2.75E-06 |
| 2 | GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 6.80E-05 |
| 3 | GO:0031491: nucleosome binding | 6.80E-05 |
| 4 | GO:0001055: RNA polymerase II activity | 1.44E-04 |
| 5 | GO:0008094: DNA-dependent ATPase activity | 3.32E-04 |
| 6 | GO:0008236: serine-type peptidase activity | 7.68E-04 |
| 7 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.00E-03 |
| 8 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.32E-03 |
| 9 | GO:0031625: ubiquitin protein ligase binding | 1.41E-03 |
| 10 | GO:0004386: helicase activity | 1.76E-03 |
| 11 | GO:0004252: serine-type endopeptidase activity | 2.07E-03 |
| 12 | GO:0005515: protein binding | 5.19E-03 |
| 13 | GO:0004842: ubiquitin-protein transferase activity | 1.48E-02 |
| 14 | GO:0004674: protein serine/threonine kinase activity | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005634: nucleus | 0.00E+00 |
| 2 | GO:0005652: nuclear lamina | 1.45E-05 |
| 3 | GO:0010369: chromocenter | 6.80E-05 |
| 4 | GO:0034399: nuclear periphery | 9.62E-05 |
| 5 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.96E-04 |
| 6 | GO:0031965: nuclear membrane | 5.05E-04 |
| 7 | GO:0000151: ubiquitin ligase complex | 7.94E-04 |
| 8 | GO:0031977: thylakoid lumen | 1.03E-03 |
| 9 | GO:0005654: nucleoplasm | 1.89E-03 |
| 10 | GO:0009543: chloroplast thylakoid lumen | 1.93E-03 |
| 11 | GO:0009579: thylakoid | 8.15E-03 |
| 12 | GO:0009534: chloroplast thylakoid | 8.21E-03 |
| 13 | GO:0009506: plasmodesma | 1.17E-02 |
| 14 | GO:0009535: chloroplast thylakoid membrane | 2.09E-02 |
| 15 | GO:0009507: chloroplast | 2.87E-02 |
| 16 | GO:0009941: chloroplast envelope | 3.56E-02 |
| 17 | GO:0005773: vacuole | 3.88E-02 |
| 18 | GO:0009570: chloroplast stroma | 4.52E-02 |