GO Enrichment Analysis of Co-expressed Genes with
AT2G45970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042493: response to drug | 0.00E+00 |
| 2 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 7 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 8 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 9 | GO:0042254: ribosome biogenesis | 6.68E-08 |
| 10 | GO:0006412: translation | 1.09E-07 |
| 11 | GO:0015995: chlorophyll biosynthetic process | 3.87E-06 |
| 12 | GO:0032544: plastid translation | 1.04E-05 |
| 13 | GO:0009735: response to cytokinin | 4.34E-05 |
| 14 | GO:0010411: xyloglucan metabolic process | 7.13E-05 |
| 15 | GO:0042372: phylloquinone biosynthetic process | 1.74E-04 |
| 16 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.76E-04 |
| 17 | GO:0006633: fatty acid biosynthetic process | 2.02E-04 |
| 18 | GO:0042335: cuticle development | 2.47E-04 |
| 19 | GO:0000413: protein peptidyl-prolyl isomerization | 2.47E-04 |
| 20 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 2.89E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 2.89E-04 |
| 22 | GO:0071588: hydrogen peroxide mediated signaling pathway | 2.89E-04 |
| 23 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.89E-04 |
| 24 | GO:0006783: heme biosynthetic process | 4.25E-04 |
| 25 | GO:0009828: plant-type cell wall loosening | 4.67E-04 |
| 26 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.88E-04 |
| 27 | GO:0031648: protein destabilization | 6.34E-04 |
| 28 | GO:0009773: photosynthetic electron transport in photosystem I | 6.77E-04 |
| 29 | GO:0010207: photosystem II assembly | 9.86E-04 |
| 30 | GO:0015840: urea transport | 1.03E-03 |
| 31 | GO:0019563: glycerol catabolic process | 1.03E-03 |
| 32 | GO:0045493: xylan catabolic process | 1.03E-03 |
| 33 | GO:0032504: multicellular organism reproduction | 1.03E-03 |
| 34 | GO:0010025: wax biosynthetic process | 1.22E-03 |
| 35 | GO:0006833: water transport | 1.22E-03 |
| 36 | GO:0019344: cysteine biosynthetic process | 1.35E-03 |
| 37 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 1.47E-03 |
| 38 | GO:0009650: UV protection | 1.47E-03 |
| 39 | GO:0010731: protein glutathionylation | 1.47E-03 |
| 40 | GO:0006424: glutamyl-tRNA aminoacylation | 1.47E-03 |
| 41 | GO:2001141: regulation of RNA biosynthetic process | 1.47E-03 |
| 42 | GO:0080170: hydrogen peroxide transmembrane transport | 1.47E-03 |
| 43 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.47E-03 |
| 44 | GO:0042546: cell wall biogenesis | 1.59E-03 |
| 45 | GO:2000122: negative regulation of stomatal complex development | 1.97E-03 |
| 46 | GO:0030104: water homeostasis | 1.97E-03 |
| 47 | GO:0010037: response to carbon dioxide | 1.97E-03 |
| 48 | GO:0006808: regulation of nitrogen utilization | 1.97E-03 |
| 49 | GO:0015976: carbon utilization | 1.97E-03 |
| 50 | GO:0006183: GTP biosynthetic process | 1.97E-03 |
| 51 | GO:0009664: plant-type cell wall organization | 2.01E-03 |
| 52 | GO:0009826: unidimensional cell growth | 2.47E-03 |
| 53 | GO:0080022: primary root development | 2.48E-03 |
| 54 | GO:0034220: ion transmembrane transport | 2.48E-03 |
| 55 | GO:0032543: mitochondrial translation | 2.52E-03 |
| 56 | GO:0010236: plastoquinone biosynthetic process | 2.52E-03 |
| 57 | GO:0006665: sphingolipid metabolic process | 2.52E-03 |
| 58 | GO:0034052: positive regulation of plant-type hypersensitive response | 2.52E-03 |
| 59 | GO:0009658: chloroplast organization | 2.61E-03 |
| 60 | GO:0032973: amino acid export | 3.11E-03 |
| 61 | GO:0042549: photosystem II stabilization | 3.11E-03 |
| 62 | GO:0000302: response to reactive oxygen species | 3.30E-03 |
| 63 | GO:0009612: response to mechanical stimulus | 3.74E-03 |
| 64 | GO:0010019: chloroplast-nucleus signaling pathway | 3.74E-03 |
| 65 | GO:0010555: response to mannitol | 3.74E-03 |
| 66 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 3.74E-03 |
| 67 | GO:0050829: defense response to Gram-negative bacterium | 4.41E-03 |
| 68 | GO:0009645: response to low light intensity stimulus | 4.41E-03 |
| 69 | GO:0010444: guard mother cell differentiation | 4.41E-03 |
| 70 | GO:0009610: response to symbiotic fungus | 4.41E-03 |
| 71 | GO:0009772: photosynthetic electron transport in photosystem II | 4.41E-03 |
| 72 | GO:0043090: amino acid import | 4.41E-03 |
| 73 | GO:0030497: fatty acid elongation | 4.41E-03 |
| 74 | GO:0071555: cell wall organization | 4.67E-03 |
| 75 | GO:0010027: thylakoid membrane organization | 4.76E-03 |
| 76 | GO:0043068: positive regulation of programmed cell death | 5.12E-03 |
| 77 | GO:0009642: response to light intensity | 5.12E-03 |
| 78 | GO:0006869: lipid transport | 5.49E-03 |
| 79 | GO:0006526: arginine biosynthetic process | 5.87E-03 |
| 80 | GO:0009932: cell tip growth | 5.87E-03 |
| 81 | GO:0071482: cellular response to light stimulus | 5.87E-03 |
| 82 | GO:0000160: phosphorelay signal transduction system | 6.53E-03 |
| 83 | GO:0051865: protein autoubiquitination | 6.65E-03 |
| 84 | GO:0080144: amino acid homeostasis | 6.65E-03 |
| 85 | GO:0009051: pentose-phosphate shunt, oxidative branch | 6.65E-03 |
| 86 | GO:0009407: toxin catabolic process | 6.85E-03 |
| 87 | GO:0042761: very long-chain fatty acid biosynthetic process | 7.48E-03 |
| 88 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.48E-03 |
| 89 | GO:0034599: cellular response to oxidative stress | 8.24E-03 |
| 90 | GO:0006535: cysteine biosynthetic process from serine | 8.33E-03 |
| 91 | GO:0043069: negative regulation of programmed cell death | 8.33E-03 |
| 92 | GO:0006949: syncytium formation | 8.33E-03 |
| 93 | GO:0006415: translational termination | 9.22E-03 |
| 94 | GO:0006352: DNA-templated transcription, initiation | 9.22E-03 |
| 95 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.22E-03 |
| 96 | GO:0010015: root morphogenesis | 9.22E-03 |
| 97 | GO:0000038: very long-chain fatty acid metabolic process | 9.22E-03 |
| 98 | GO:0006810: transport | 9.90E-03 |
| 99 | GO:0005975: carbohydrate metabolic process | 1.06E-02 |
| 100 | GO:0010628: positive regulation of gene expression | 1.11E-02 |
| 101 | GO:0006006: glucose metabolic process | 1.11E-02 |
| 102 | GO:0050826: response to freezing | 1.11E-02 |
| 103 | GO:0006094: gluconeogenesis | 1.11E-02 |
| 104 | GO:0009636: response to toxic substance | 1.15E-02 |
| 105 | GO:0019253: reductive pentose-phosphate cycle | 1.21E-02 |
| 106 | GO:0010143: cutin biosynthetic process | 1.21E-02 |
| 107 | GO:0010030: positive regulation of seed germination | 1.31E-02 |
| 108 | GO:0009736: cytokinin-activated signaling pathway | 1.38E-02 |
| 109 | GO:0005992: trehalose biosynthetic process | 1.52E-02 |
| 110 | GO:0000027: ribosomal large subunit assembly | 1.52E-02 |
| 111 | GO:0007017: microtubule-based process | 1.63E-02 |
| 112 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.66E-02 |
| 113 | GO:0048511: rhythmic process | 1.75E-02 |
| 114 | GO:0061077: chaperone-mediated protein folding | 1.75E-02 |
| 115 | GO:0009814: defense response, incompatible interaction | 1.86E-02 |
| 116 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.86E-02 |
| 117 | GO:0015979: photosynthesis | 1.88E-02 |
| 118 | GO:0009411: response to UV | 1.98E-02 |
| 119 | GO:0006012: galactose metabolic process | 1.98E-02 |
| 120 | GO:0045454: cell redox homeostasis | 2.00E-02 |
| 121 | GO:0019722: calcium-mediated signaling | 2.10E-02 |
| 122 | GO:0010091: trichome branching | 2.10E-02 |
| 123 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.23E-02 |
| 124 | GO:0042631: cellular response to water deprivation | 2.35E-02 |
| 125 | GO:0006520: cellular amino acid metabolic process | 2.48E-02 |
| 126 | GO:0016042: lipid catabolic process | 2.50E-02 |
| 127 | GO:0042752: regulation of circadian rhythm | 2.61E-02 |
| 128 | GO:0042744: hydrogen peroxide catabolic process | 2.80E-02 |
| 129 | GO:0071554: cell wall organization or biogenesis | 2.88E-02 |
| 130 | GO:0002229: defense response to oomycetes | 2.88E-02 |
| 131 | GO:0055114: oxidation-reduction process | 3.00E-02 |
| 132 | GO:0010583: response to cyclopentenone | 3.02E-02 |
| 133 | GO:1901657: glycosyl compound metabolic process | 3.16E-02 |
| 134 | GO:0040008: regulation of growth | 3.24E-02 |
| 135 | GO:0009567: double fertilization forming a zygote and endosperm | 3.31E-02 |
| 136 | GO:0045490: pectin catabolic process | 3.39E-02 |
| 137 | GO:0007267: cell-cell signaling | 3.45E-02 |
| 138 | GO:0009627: systemic acquired resistance | 4.05E-02 |
| 139 | GO:0042128: nitrate assimilation | 4.05E-02 |
| 140 | GO:0016311: dephosphorylation | 4.37E-02 |
| 141 | GO:0042742: defense response to bacterium | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 3 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 6 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 7 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 8 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 9 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 10 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 11 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 12 | GO:0019843: rRNA binding | 9.37E-14 |
| 13 | GO:0003735: structural constituent of ribosome | 7.12E-11 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.30E-08 |
| 15 | GO:0005528: FK506 binding | 3.54E-06 |
| 16 | GO:0016851: magnesium chelatase activity | 3.07E-05 |
| 17 | GO:0009922: fatty acid elongase activity | 8.74E-05 |
| 18 | GO:0004130: cytochrome-c peroxidase activity | 1.27E-04 |
| 19 | GO:0051920: peroxiredoxin activity | 1.74E-04 |
| 20 | GO:0016209: antioxidant activity | 2.87E-04 |
| 21 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.89E-04 |
| 22 | GO:0009374: biotin binding | 2.89E-04 |
| 23 | GO:0015200: methylammonium transmembrane transporter activity | 2.89E-04 |
| 24 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.89E-04 |
| 25 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.89E-04 |
| 26 | GO:0004807: triose-phosphate isomerase activity | 2.89E-04 |
| 27 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.89E-04 |
| 28 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.89E-04 |
| 29 | GO:0004655: porphobilinogen synthase activity | 2.89E-04 |
| 30 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.64E-04 |
| 31 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.05E-04 |
| 32 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.55E-04 |
| 33 | GO:0015250: water channel activity | 5.86E-04 |
| 34 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 6.34E-04 |
| 35 | GO:0003938: IMP dehydrogenase activity | 6.34E-04 |
| 36 | GO:0008289: lipid binding | 7.17E-04 |
| 37 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.20E-04 |
| 38 | GO:0004751: ribose-5-phosphate isomerase activity | 1.03E-03 |
| 39 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 1.03E-03 |
| 40 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 1.03E-03 |
| 41 | GO:0017150: tRNA dihydrouridine synthase activity | 1.03E-03 |
| 42 | GO:0050734: hydroxycinnamoyltransferase activity | 1.03E-03 |
| 43 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.03E-03 |
| 44 | GO:0004364: glutathione transferase activity | 1.43E-03 |
| 45 | GO:0016149: translation release factor activity, codon specific | 1.47E-03 |
| 46 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 1.47E-03 |
| 47 | GO:0008097: 5S rRNA binding | 1.47E-03 |
| 48 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.97E-03 |
| 49 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.97E-03 |
| 50 | GO:0015204: urea transmembrane transporter activity | 1.97E-03 |
| 51 | GO:0004659: prenyltransferase activity | 1.97E-03 |
| 52 | GO:0001053: plastid sigma factor activity | 1.97E-03 |
| 53 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.97E-03 |
| 54 | GO:0016836: hydro-lyase activity | 1.97E-03 |
| 55 | GO:0016987: sigma factor activity | 1.97E-03 |
| 56 | GO:0003989: acetyl-CoA carboxylase activity | 2.52E-03 |
| 57 | GO:0016788: hydrolase activity, acting on ester bonds | 2.69E-03 |
| 58 | GO:0016208: AMP binding | 3.11E-03 |
| 59 | GO:0016688: L-ascorbate peroxidase activity | 3.11E-03 |
| 60 | GO:0008200: ion channel inhibitor activity | 3.11E-03 |
| 61 | GO:0008519: ammonium transmembrane transporter activity | 3.11E-03 |
| 62 | GO:0004124: cysteine synthase activity | 3.74E-03 |
| 63 | GO:0000156: phosphorelay response regulator activity | 3.75E-03 |
| 64 | GO:0052689: carboxylic ester hydrolase activity | 4.23E-03 |
| 65 | GO:0043295: glutathione binding | 4.41E-03 |
| 66 | GO:0016597: amino acid binding | 4.50E-03 |
| 67 | GO:0004033: aldo-keto reductase (NADP) activity | 5.12E-03 |
| 68 | GO:0004034: aldose 1-epimerase activity | 5.12E-03 |
| 69 | GO:0003747: translation release factor activity | 6.65E-03 |
| 70 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 6.65E-03 |
| 71 | GO:0005507: copper ion binding | 8.04E-03 |
| 72 | GO:0003993: acid phosphatase activity | 8.24E-03 |
| 73 | GO:0004805: trehalose-phosphatase activity | 8.33E-03 |
| 74 | GO:0008378: galactosyltransferase activity | 1.01E-02 |
| 75 | GO:0004089: carbonate dehydratase activity | 1.11E-02 |
| 76 | GO:0004601: peroxidase activity | 1.21E-02 |
| 77 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.41E-02 |
| 78 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.41E-02 |
| 79 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.41E-02 |
| 80 | GO:0004650: polygalacturonase activity | 1.79E-02 |
| 81 | GO:0030570: pectate lyase activity | 1.98E-02 |
| 82 | GO:0008514: organic anion transmembrane transporter activity | 2.10E-02 |
| 83 | GO:0003713: transcription coactivator activity | 2.48E-02 |
| 84 | GO:0016853: isomerase activity | 2.61E-02 |
| 85 | GO:0019901: protein kinase binding | 2.75E-02 |
| 86 | GO:0005200: structural constituent of cytoskeleton | 3.45E-02 |
| 87 | GO:0016413: O-acetyltransferase activity | 3.60E-02 |
| 88 | GO:0102483: scopolin beta-glucosidase activity | 4.21E-02 |
| 89 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 3 | GO:0009570: chloroplast stroma | 3.71E-30 |
| 4 | GO:0009507: chloroplast | 5.71E-30 |
| 5 | GO:0009941: chloroplast envelope | 1.73E-23 |
| 6 | GO:0031977: thylakoid lumen | 1.12E-14 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.91E-12 |
| 8 | GO:0009505: plant-type cell wall | 1.96E-11 |
| 9 | GO:0048046: apoplast | 1.39E-10 |
| 10 | GO:0009579: thylakoid | 1.61E-10 |
| 11 | GO:0005618: cell wall | 2.88E-10 |
| 12 | GO:0005840: ribosome | 6.36E-09 |
| 13 | GO:0009534: chloroplast thylakoid | 2.42E-08 |
| 14 | GO:0016020: membrane | 9.59E-08 |
| 15 | GO:0009535: chloroplast thylakoid membrane | 6.42E-07 |
| 16 | GO:0005576: extracellular region | 7.09E-06 |
| 17 | GO:0010007: magnesium chelatase complex | 1.37E-05 |
| 18 | GO:0031225: anchored component of membrane | 4.33E-05 |
| 19 | GO:0046658: anchored component of plasma membrane | 6.30E-05 |
| 20 | GO:0042807: central vacuole | 2.27E-04 |
| 21 | GO:0009923: fatty acid elongase complex | 2.89E-04 |
| 22 | GO:0043674: columella | 2.89E-04 |
| 23 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.89E-04 |
| 24 | GO:0000311: plastid large ribosomal subunit | 7.74E-04 |
| 25 | GO:0009509: chromoplast | 1.03E-03 |
| 26 | GO:0009317: acetyl-CoA carboxylase complex | 1.03E-03 |
| 27 | GO:0009536: plastid | 2.22E-03 |
| 28 | GO:0009506: plasmodesma | 4.35E-03 |
| 29 | GO:0009533: chloroplast stromal thylakoid | 4.41E-03 |
| 30 | GO:0000326: protein storage vacuole | 5.87E-03 |
| 31 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 6.65E-03 |
| 32 | GO:0045298: tubulin complex | 6.65E-03 |
| 33 | GO:0005886: plasma membrane | 9.18E-03 |
| 34 | GO:0000312: plastid small ribosomal subunit | 1.21E-02 |
| 35 | GO:0022626: cytosolic ribosome | 1.46E-02 |
| 36 | GO:0009654: photosystem II oxygen evolving complex | 1.63E-02 |
| 37 | GO:0022625: cytosolic large ribosomal subunit | 1.69E-02 |
| 38 | GO:0015935: small ribosomal subunit | 1.75E-02 |
| 39 | GO:0019898: extrinsic component of membrane | 2.75E-02 |
| 40 | GO:0071944: cell periphery | 3.16E-02 |
| 41 | GO:0009705: plant-type vacuole membrane | 3.39E-02 |
| 42 | GO:0005778: peroxisomal membrane | 3.45E-02 |
| 43 | GO:0009295: nucleoid | 3.45E-02 |
| 44 | GO:0005887: integral component of plasma membrane | 3.79E-02 |
| 45 | GO:0005774: vacuolar membrane | 4.93E-02 |