co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45910

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
2	GO:0010111: glyoxysome organization	0.00E+00
3	GO:0048024: regulation of mRNA splicing, via spliceosome	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:0010477: response to sulfur dioxide	0.00E+00
6	GO:0036258: multivesicular body assembly	0.00E+00
7	GO:0016236: macroautophagy	0.00E+00
8	GO:0010606: positive regulation of cytoplasmic mRNA processing body assembly	0.00E+00
9	GO:0009991: response to extracellular stimulus	0.00E+00
10	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
11	GO:0030968: endoplasmic reticulum unfolded protein response	1.72E-04
12	GO:0030242: pexophagy	1.77E-04
13	GO:0000303: response to superoxide	1.77E-04
14	GO:0034214: protein hexamerization	1.77E-04
15	GO:0006376: mRNA splice site selection	1.77E-04
16	GO:0010265: SCF complex assembly	1.77E-04
17	GO:0031338: regulation of vesicle fusion	1.77E-04
18	GO:0071806: protein transmembrane transport	1.77E-04
19	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.77E-04
20	GO:0046167: glycerol-3-phosphate biosynthetic process	1.77E-04
21	GO:0006914: autophagy	1.84E-04
22	GO:0006950: response to stress	2.94E-04
23	GO:0006641: triglyceride metabolic process	4.01E-04
24	GO:0030010: establishment of cell polarity	4.01E-04
25	GO:0051258: protein polymerization	4.01E-04
26	GO:0019395: fatty acid oxidation	4.01E-04
27	GO:0071395: cellular response to jasmonic acid stimulus	4.01E-04
28	GO:0048527: lateral root development	4.07E-04
29	GO:0009867: jasmonic acid mediated signaling pathway	4.59E-04
30	GO:0006631: fatty acid metabolic process	5.71E-04
31	GO:0006013: mannose metabolic process	6.55E-04
32	GO:0019563: glycerol catabolic process	6.55E-04
33	GO:0006556: S-adenosylmethionine biosynthetic process	6.55E-04
34	GO:0090630: activation of GTPase activity	6.55E-04
35	GO:0006517: protein deglycosylation	6.55E-04
36	GO:0031408: oxylipin biosynthetic process	8.37E-04
37	GO:0030433: ubiquitin-dependent ERAD pathway	9.13E-04
38	GO:1901000: regulation of response to salt stress	9.34E-04
39	GO:0006072: glycerol-3-phosphate metabolic process	9.34E-04
40	GO:0006809: nitric oxide biosynthetic process	9.34E-04
41	GO:0080119: ER body organization	9.34E-04
42	GO:0070676: intralumenal vesicle formation	9.34E-04
43	GO:0001676: long-chain fatty acid metabolic process	9.34E-04
44	GO:0051259: protein oligomerization	9.34E-04
45	GO:0048366: leaf development	1.15E-03
46	GO:0015994: chlorophyll metabolic process	1.24E-03
47	GO:0045324: late endosome to vacuole transport	1.24E-03
48	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.24E-03
49	GO:0010188: response to microbial phytotoxin	1.24E-03
50	GO:0010200: response to chitin	1.31E-03
51	GO:0006623: protein targeting to vacuole	1.55E-03
52	GO:0032876: negative regulation of DNA endoreduplication	1.57E-03
53	GO:0007029: endoplasmic reticulum organization	1.57E-03
54	GO:0006886: intracellular protein transport	1.71E-03
55	GO:0015031: protein transport	1.85E-03
56	GO:0048232: male gamete generation	1.94E-03
57	GO:0070814: hydrogen sulfide biosynthetic process	1.94E-03
58	GO:1900425: negative regulation of defense response to bacterium	1.94E-03
59	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.94E-03
60	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.94E-03
61	GO:0006751: glutathione catabolic process	1.94E-03
62	GO:0006511: ubiquitin-dependent protein catabolic process	2.15E-03
63	GO:0009790: embryo development	2.29E-03
64	GO:0000911: cytokinesis by cell plate formation	2.32E-03
65	GO:0033962: cytoplasmic mRNA processing body assembly	2.32E-03
66	GO:0017148: negative regulation of translation	2.32E-03
67	GO:0006397: mRNA processing	2.39E-03
68	GO:0009816: defense response to bacterium, incompatible interaction	2.51E-03
69	GO:0071446: cellular response to salicylic acid stimulus	2.74E-03
70	GO:0015937: coenzyme A biosynthetic process	2.74E-03
71	GO:0009610: response to symbiotic fungus	2.74E-03
72	GO:0006491: N-glycan processing	3.17E-03
73	GO:0006102: isocitrate metabolic process	3.17E-03
74	GO:0010311: lateral root formation	3.25E-03
75	GO:0009880: embryonic pattern specification	3.63E-03
76	GO:0009734: auxin-activated signaling pathway	3.78E-03
77	GO:0006468: protein phosphorylation	3.86E-03
78	GO:0009821: alkaloid biosynthetic process	4.10E-03
79	GO:0090333: regulation of stomatal closure	4.10E-03
80	GO:0009638: phototropism	4.60E-03
81	GO:0048268: clathrin coat assembly	4.60E-03
82	GO:0042761: very long-chain fatty acid biosynthetic process	4.60E-03
83	GO:2000280: regulation of root development	4.60E-03
84	GO:0019538: protein metabolic process	5.11E-03
85	GO:0000103: sulfate assimilation	5.11E-03
86	GO:0043069: negative regulation of programmed cell death	5.11E-03
87	GO:0010072: primary shoot apical meristem specification	5.65E-03
88	GO:0072593: reactive oxygen species metabolic process	5.65E-03
89	GO:0009723: response to ethylene	5.94E-03
90	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	6.09E-03
91	GO:0008361: regulation of cell size	6.20E-03
92	GO:0006790: sulfur compound metabolic process	6.20E-03
93	GO:0012501: programmed cell death	6.20E-03
94	GO:0042538: hyperosmotic salinity response	6.32E-03
95	GO:0010102: lateral root morphogenesis	6.78E-03
96	GO:0009785: blue light signaling pathway	6.78E-03
97	GO:0006626: protein targeting to mitochondrion	6.78E-03
98	GO:0055046: microgametogenesis	6.78E-03
99	GO:0051603: proteolysis involved in cellular protein catabolic process	7.02E-03
100	GO:0046777: protein autophosphorylation	7.06E-03
101	GO:0002237: response to molecule of bacterial origin	7.37E-03
102	GO:0009887: animal organ morphogenesis	7.37E-03
103	GO:0006417: regulation of translation	7.51E-03
104	GO:0007030: Golgi organization	7.98E-03
105	GO:0009825: multidimensional cell growth	7.98E-03
106	GO:0046854: phosphatidylinositol phosphorylation	7.98E-03
107	GO:0010053: root epidermal cell differentiation	7.98E-03
108	GO:0030150: protein import into mitochondrial matrix	9.26E-03
109	GO:2000377: regulation of reactive oxygen species metabolic process	9.26E-03
110	GO:0006487: protein N-linked glycosylation	9.26E-03
111	GO:0009695: jasmonic acid biosynthetic process	9.92E-03
112	GO:0061077: chaperone-mediated protein folding	1.06E-02
113	GO:0003333: amino acid transmembrane transport	1.06E-02
114	GO:0051260: protein homooligomerization	1.06E-02
115	GO:0048364: root development	1.12E-02
116	GO:0009814: defense response, incompatible interaction	1.13E-02
117	GO:0006730: one-carbon metabolic process	1.13E-02
118	GO:0031348: negative regulation of defense response	1.13E-02
119	GO:0009693: ethylene biosynthetic process	1.20E-02
120	GO:0071215: cellular response to abscisic acid stimulus	1.20E-02
121	GO:0009561: megagametogenesis	1.27E-02
122	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.35E-02
123	GO:0042147: retrograde transport, endosome to Golgi	1.35E-02
124	GO:0070417: cellular response to cold	1.35E-02
125	GO:0042631: cellular response to water deprivation	1.43E-02
126	GO:0010087: phloem or xylem histogenesis	1.43E-02
127	GO:0009873: ethylene-activated signaling pathway	1.47E-02
128	GO:0010154: fruit development	1.50E-02
129	GO:0010197: polar nucleus fusion	1.50E-02
130	GO:0042742: defense response to bacterium	1.56E-02
131	GO:0042752: regulation of circadian rhythm	1.58E-02
132	GO:0040008: regulation of growth	1.60E-02
133	GO:0055072: iron ion homeostasis	1.66E-02
134	GO:0010150: leaf senescence	1.68E-02
135	GO:0002229: defense response to oomycetes	1.75E-02
136	GO:0010193: response to ozone	1.75E-02
137	GO:0006891: intra-Golgi vesicle-mediated transport	1.75E-02
138	GO:0006635: fatty acid beta-oxidation	1.75E-02
139	GO:0010583: response to cyclopentenone	1.83E-02
140	GO:0016032: viral process	1.83E-02
141	GO:0009630: gravitropism	1.83E-02
142	GO:0071281: cellular response to iron ion	1.91E-02
143	GO:0007166: cell surface receptor signaling pathway	1.92E-02
144	GO:0006464: cellular protein modification process	2.00E-02
145	GO:0009617: response to bacterium	2.00E-02
146	GO:0010286: heat acclimation	2.09E-02
147	GO:0051607: defense response to virus	2.18E-02
148	GO:0016579: protein deubiquitination	2.18E-02
149	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.36E-02
150	GO:0042128: nitrate assimilation	2.45E-02
151	GO:0006888: ER to Golgi vesicle-mediated transport	2.55E-02
152	GO:0048573: photoperiodism, flowering	2.55E-02
153	GO:0016049: cell growth	2.64E-02
154	GO:0009817: defense response to fungus, incompatible interaction	2.74E-02
155	GO:0006970: response to osmotic stress	2.80E-02
156	GO:0048767: root hair elongation	2.84E-02
157	GO:0007049: cell cycle	2.90E-02
158	GO:0006099: tricarboxylic acid cycle	3.35E-02
159	GO:0006897: endocytosis	3.67E-02
160	GO:0051707: response to other organism	3.88E-02
161	GO:0008283: cell proliferation	3.88E-02
162	GO:0045892: negative regulation of transcription, DNA-templated	3.91E-02
163	GO:0000209: protein polyubiquitination	4.00E-02
164	GO:0031347: regulation of defense response	4.45E-02
165	GO:0009846: pollen germination	4.56E-02
166	GO:0006813: potassium ion transport	4.80E-02
167	GO:0009736: cytokinin-activated signaling pathway	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0004572: mannosyl-oligosaccharide 1,3-1,6-alpha-mannosidase activity	0.00E+00
2	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
3	GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives	0.00E+00
4	GO:0004370: glycerol kinase activity	0.00E+00
5	GO:0008482: sulfite oxidase activity	0.00E+00
6	GO:0017168: 5-oxoprolinase (ATP-hydrolyzing) activity	0.00E+00
7	GO:0005524: ATP binding	7.94E-06
8	GO:0005515: protein binding	2.63E-05
9	GO:0030544: Hsp70 protein binding	1.77E-04
10	GO:0004750: ribulose-phosphate 3-epimerase activity	4.01E-04
11	GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.01E-04
12	GO:0003988: acetyl-CoA C-acyltransferase activity	4.01E-04
13	GO:0019200: carbohydrate kinase activity	4.01E-04
14	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.01E-04
15	GO:0004594: pantothenate kinase activity	4.01E-04
16	GO:0004674: protein serine/threonine kinase activity	4.08E-04
17	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.13E-04
18	GO:0004180: carboxypeptidase activity	6.55E-04
19	GO:0004781: sulfate adenylyltransferase (ATP) activity	6.55E-04
20	GO:0004478: methionine adenosyltransferase activity	6.55E-04
21	GO:0043130: ubiquitin binding	6.94E-04
22	GO:0016301: kinase activity	8.95E-04
23	GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity	9.34E-04
24	GO:0004416: hydroxyacylglutathione hydrolase activity	9.34E-04
25	GO:0003995: acyl-CoA dehydrogenase activity	1.24E-03
26	GO:0004301: epoxide hydrolase activity	1.24E-03
27	GO:0017137: Rab GTPase binding	1.57E-03
28	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.57E-03
29	GO:0030151: molybdenum ion binding	1.57E-03
30	GO:0036402: proteasome-activating ATPase activity	1.94E-03
31	GO:0102391: decanoate--CoA ligase activity	2.32E-03
32	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.32E-03
33	GO:0003730: mRNA 3'-UTR binding	2.32E-03
34	GO:0004559: alpha-mannosidase activity	2.32E-03
35	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.32E-03
36	GO:0051213: dioxygenase activity	2.38E-03
37	GO:0003729: mRNA binding	2.53E-03
38	GO:0004467: long-chain fatty acid-CoA ligase activity	2.74E-03
39	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.17E-03
40	GO:0005096: GTPase activator activity	3.25E-03
41	GO:0015174: basic amino acid transmembrane transporter activity	4.60E-03
42	GO:0045309: protein phosphorylated amino acid binding	4.60E-03
43	GO:0004713: protein tyrosine kinase activity	5.11E-03
44	GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity	5.11E-03
45	GO:0005545: 1-phosphatidylinositol binding	5.11E-03
46	GO:0019904: protein domain specific binding	5.65E-03
47	GO:0004521: endoribonuclease activity	6.20E-03
48	GO:0015266: protein channel activity	6.78E-03
49	GO:0017025: TBP-class protein binding	7.98E-03
50	GO:0004725: protein tyrosine phosphatase activity	8.61E-03
51	GO:0042803: protein homodimerization activity	8.65E-03
52	GO:0005528: FK506 binding	9.26E-03
53	GO:0005516: calmodulin binding	9.98E-03
54	GO:0036459: thiol-dependent ubiquitinyl hydrolase activity	1.06E-02
55	GO:0004298: threonine-type endopeptidase activity	1.06E-02
56	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.06E-02
57	GO:0005249: voltage-gated potassium channel activity	1.43E-02
58	GO:0030276: clathrin binding	1.50E-02
59	GO:0016787: hydrolase activity	1.62E-02
60	GO:0004843: thiol-dependent ubiquitin-specific protease activity	1.75E-02
61	GO:0016887: ATPase activity	1.86E-02
62	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.91E-02
63	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.09E-02
64	GO:0016491: oxidoreductase activity	2.35E-02
65	GO:0046982: protein heterodimerization activity	2.55E-02
66	GO:0030247: polysaccharide binding	2.55E-02
67	GO:0008236: serine-type peptidase activity	2.64E-02
68	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.74E-02
69	GO:0004672: protein kinase activity	2.76E-02
70	GO:0030246: carbohydrate binding	3.19E-02
71	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.24E-02
72	GO:0003746: translation elongation factor activity	3.24E-02
73	GO:0008270: zinc ion binding	3.35E-02
74	GO:0061630: ubiquitin protein ligase activity	3.38E-02
75	GO:0004871: signal transducer activity	4.03E-02
76	GO:0043621: protein self-association	4.11E-02
77	GO:0035091: phosphatidylinositol binding	4.11E-02
78	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.33E-02
79	GO:0051287: NAD binding	4.45E-02

Rank	GO Term	Adjusted P value
1	GO:0071561: nucleus-vacuole junction	0.00E+00
2	GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II	1.77E-04
3	GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I	1.77E-04
4	GO:0035061: interchromatin granule	4.01E-04
5	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.55E-04
6	GO:0000323: lytic vacuole	9.34E-04
7	GO:0008076: voltage-gated potassium channel complex	9.34E-04
8	GO:0031461: cullin-RING ubiquitin ligase complex	9.34E-04
9	GO:0005886: plasma membrane	1.02E-03
10	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.03E-03
11	GO:0030136: clathrin-coated vesicle	1.16E-03
12	GO:0005776: autophagosome	1.24E-03
13	GO:0000813: ESCRT I complex	1.57E-03
14	GO:0030127: COPII vesicle coat	1.94E-03
15	GO:0016363: nuclear matrix	2.32E-03
16	GO:0031597: cytosolic proteasome complex	2.32E-03
17	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	2.74E-03
18	GO:0000794: condensed nuclear chromosome	2.74E-03
19	GO:0031595: nuclear proteasome complex	2.74E-03
20	GO:0005829: cytosol	3.14E-03
21	GO:0031305: integral component of mitochondrial inner membrane	3.17E-03
22	GO:0009514: glyoxysome	3.63E-03
23	GO:0030665: clathrin-coated vesicle membrane	4.60E-03
24	GO:0008540: proteasome regulatory particle, base subcomplex	4.60E-03
25	GO:0031902: late endosome membrane	4.64E-03
26	GO:0017119: Golgi transport complex	5.11E-03
27	GO:0005777: peroxisome	6.62E-03
28	GO:0000502: proteasome complex	6.78E-03
29	GO:0005795: Golgi stack	7.98E-03
30	GO:0005634: nucleus	8.48E-03
31	GO:0005834: heterotrimeric G-protein complex	8.55E-03
32	GO:0005839: proteasome core complex	1.06E-02
33	GO:0005905: clathrin-coated pit	1.06E-02
34	GO:0031410: cytoplasmic vesicle	1.13E-02
35	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.27E-02
36	GO:0009524: phragmoplast	1.28E-02
37	GO:0005794: Golgi apparatus	1.40E-02
38	GO:0005770: late endosome	1.50E-02
39	GO:0030529: intracellular ribonucleoprotein complex	2.27E-02
40	GO:0000932: P-body	2.27E-02
41	GO:0000151: ubiquitin ligase complex	2.74E-02
42	GO:0005643: nuclear pore	2.74E-02
43	GO:0005789: endoplasmic reticulum membrane	2.93E-02
44	GO:0005773: vacuole	2.95E-02
45	GO:0000786: nucleosome	3.14E-02
46	GO:0005737: cytoplasm	3.17E-02
47	GO:0005819: spindle	3.45E-02
48	GO:0005802: trans-Golgi network	3.95E-02
49	GO:0005856: cytoskeleton	4.22E-02
50	GO:0005622: intracellular	4.49E-02
51	GO:0005768: endosome	4.63E-02
52	GO:0005783: endoplasmic reticulum	4.85E-02