GO Enrichment Analysis of Co-expressed Genes with
AT2G45790
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 2 | GO:0006042: glucosamine biosynthetic process | 0.00E+00 |
| 3 | GO:1901137: carbohydrate derivative biosynthetic process | 0.00E+00 |
| 4 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 5 | GO:0009304: tRNA transcription | 0.00E+00 |
| 6 | GO:0031564: transcription antitermination | 0.00E+00 |
| 7 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 8 | GO:0006721: terpenoid metabolic process | 0.00E+00 |
| 9 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 2.71E-07 |
| 10 | GO:0046686: response to cadmium ion | 1.14E-05 |
| 11 | GO:0018279: protein N-linked glycosylation via asparagine | 1.28E-05 |
| 12 | GO:0006605: protein targeting | 4.94E-05 |
| 13 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 9.14E-05 |
| 14 | GO:0080120: CAAX-box protein maturation | 9.14E-05 |
| 15 | GO:0071586: CAAX-box protein processing | 9.14E-05 |
| 16 | GO:0000494: box C/D snoRNA 3'-end processing | 9.14E-05 |
| 17 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 9.14E-05 |
| 18 | GO:0016487: farnesol metabolic process | 9.14E-05 |
| 19 | GO:1990258: histone glutamine methylation | 9.14E-05 |
| 20 | GO:0051775: response to redox state | 9.14E-05 |
| 21 | GO:0006099: tricarboxylic acid cycle | 1.43E-04 |
| 22 | GO:0006123: mitochondrial electron transport, cytochrome c to oxygen | 2.16E-04 |
| 23 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.16E-04 |
| 24 | GO:0015865: purine nucleotide transport | 2.16E-04 |
| 25 | GO:0015031: protein transport | 2.88E-04 |
| 26 | GO:0006651: diacylglycerol biosynthetic process | 3.61E-04 |
| 27 | GO:0006011: UDP-glucose metabolic process | 3.61E-04 |
| 28 | GO:0045039: protein import into mitochondrial inner membrane | 3.61E-04 |
| 29 | GO:0055074: calcium ion homeostasis | 3.61E-04 |
| 30 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 3.61E-04 |
| 31 | GO:1902626: assembly of large subunit precursor of preribosome | 3.61E-04 |
| 32 | GO:0006166: purine ribonucleoside salvage | 5.20E-04 |
| 33 | GO:0046902: regulation of mitochondrial membrane permeability | 5.20E-04 |
| 34 | GO:0006168: adenine salvage | 5.20E-04 |
| 35 | GO:0009651: response to salt stress | 5.53E-04 |
| 36 | GO:0010483: pollen tube reception | 6.90E-04 |
| 37 | GO:0000956: nuclear-transcribed mRNA catabolic process | 6.90E-04 |
| 38 | GO:0000460: maturation of 5.8S rRNA | 6.90E-04 |
| 39 | GO:0044209: AMP salvage | 8.73E-04 |
| 40 | GO:0031167: rRNA methylation | 8.73E-04 |
| 41 | GO:0000470: maturation of LSU-rRNA | 1.07E-03 |
| 42 | GO:0009423: chorismate biosynthetic process | 1.27E-03 |
| 43 | GO:0006412: translation | 1.45E-03 |
| 44 | GO:0042254: ribosome biogenesis | 1.59E-03 |
| 45 | GO:0006102: isocitrate metabolic process | 1.72E-03 |
| 46 | GO:0009690: cytokinin metabolic process | 1.72E-03 |
| 47 | GO:0000028: ribosomal small subunit assembly | 1.72E-03 |
| 48 | GO:0022900: electron transport chain | 1.96E-03 |
| 49 | GO:0001510: RNA methylation | 1.96E-03 |
| 50 | GO:0009744: response to sucrose | 2.05E-03 |
| 51 | GO:0098656: anion transmembrane transport | 2.21E-03 |
| 52 | GO:0009846: pollen germination | 2.56E-03 |
| 53 | GO:0006886: intracellular protein transport | 2.66E-03 |
| 54 | GO:0006364: rRNA processing | 2.75E-03 |
| 55 | GO:0009073: aromatic amino acid family biosynthetic process | 3.03E-03 |
| 56 | GO:0006096: glycolytic process | 3.24E-03 |
| 57 | GO:0006890: retrograde vesicle-mediated transport, Golgi to ER | 3.32E-03 |
| 58 | GO:0006820: anion transport | 3.32E-03 |
| 59 | GO:0006094: gluconeogenesis | 3.63E-03 |
| 60 | GO:0006626: protein targeting to mitochondrion | 3.63E-03 |
| 61 | GO:0048467: gynoecium development | 3.93E-03 |
| 62 | GO:0034976: response to endoplasmic reticulum stress | 4.58E-03 |
| 63 | GO:0006487: protein N-linked glycosylation | 4.92E-03 |
| 64 | GO:0009116: nucleoside metabolic process | 4.92E-03 |
| 65 | GO:0000027: ribosomal large subunit assembly | 4.92E-03 |
| 66 | GO:0007005: mitochondrion organization | 5.98E-03 |
| 67 | GO:0009306: protein secretion | 6.73E-03 |
| 68 | GO:0008033: tRNA processing | 7.51E-03 |
| 69 | GO:0000413: protein peptidyl-prolyl isomerization | 7.51E-03 |
| 70 | GO:0010154: fruit development | 7.91E-03 |
| 71 | GO:0015986: ATP synthesis coupled proton transport | 8.32E-03 |
| 72 | GO:0080156: mitochondrial mRNA modification | 9.16E-03 |
| 73 | GO:0006635: fatty acid beta-oxidation | 9.16E-03 |
| 74 | GO:0006457: protein folding | 9.57E-03 |
| 75 | GO:0006414: translational elongation | 1.15E-02 |
| 76 | GO:0001666: response to hypoxia | 1.19E-02 |
| 77 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.23E-02 |
| 78 | GO:0016192: vesicle-mediated transport | 1.36E-02 |
| 79 | GO:0016049: cell growth | 1.38E-02 |
| 80 | GO:0009631: cold acclimation | 1.59E-02 |
| 81 | GO:0048527: lateral root development | 1.59E-02 |
| 82 | GO:0006979: response to oxidative stress | 1.71E-02 |
| 83 | GO:0006839: mitochondrial transport | 1.86E-02 |
| 84 | GO:0042542: response to hydrogen peroxide | 1.97E-02 |
| 85 | GO:0008283: cell proliferation | 2.03E-02 |
| 86 | GO:0042546: cell wall biogenesis | 2.09E-02 |
| 87 | GO:0009664: plant-type cell wall organization | 2.38E-02 |
| 88 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.57E-02 |
| 89 | GO:0006810: transport | 2.74E-02 |
| 90 | GO:0048316: seed development | 2.89E-02 |
| 91 | GO:0009735: response to cytokinin | 3.09E-02 |
| 92 | GO:0009553: embryo sac development | 3.16E-02 |
| 93 | GO:0009555: pollen development | 3.38E-02 |
| 94 | GO:0000398: mRNA splicing, via spliceosome | 3.57E-02 |
| 95 | GO:0009845: seed germination | 4.00E-02 |
| 96 | GO:0009790: embryo development | 4.22E-02 |
| 97 | GO:0006633: fatty acid biosynthetic process | 4.45E-02 |
| 98 | GO:0006413: translational initiation | 4.52E-02 |
| 99 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.58E-02 |
| 100 | GO:0007623: circadian rhythm | 4.75E-02 |
| 101 | GO:0009793: embryo development ending in seed dormancy | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 2 | GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 0.00E+00 |
| 3 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 4 | GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity | 0.00E+00 |
| 5 | GO:0047886: farnesol dehydrogenase activity | 0.00E+00 |
| 6 | GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity | 0.00E+00 |
| 7 | GO:0005507: copper ion binding | 3.96E-08 |
| 8 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 2.71E-07 |
| 9 | GO:0003746: translation elongation factor activity | 5.64E-06 |
| 10 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.28E-05 |
| 11 | GO:0030515: snoRNA binding | 3.77E-05 |
| 12 | GO:1990259: histone-glutamine methyltransferase activity | 9.14E-05 |
| 13 | GO:0042134: rRNA primary transcript binding | 9.14E-05 |
| 14 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 9.14E-05 |
| 15 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 9.14E-05 |
| 16 | GO:0097367: carbohydrate derivative binding | 9.14E-05 |
| 17 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 9.14E-05 |
| 18 | GO:0015157: oligosaccharide transmembrane transporter activity | 9.14E-05 |
| 19 | GO:0048037: cofactor binding | 9.14E-05 |
| 20 | GO:0003735: structural constituent of ribosome | 1.59E-04 |
| 21 | GO:0004634: phosphopyruvate hydratase activity | 2.16E-04 |
| 22 | GO:0043021: ribonucleoprotein complex binding | 2.16E-04 |
| 23 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.16E-04 |
| 24 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.16E-04 |
| 25 | GO:0051287: NAD binding | 2.50E-04 |
| 26 | GO:0004298: threonine-type endopeptidase activity | 3.47E-04 |
| 27 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 3.61E-04 |
| 28 | GO:0070180: large ribosomal subunit rRNA binding | 3.61E-04 |
| 29 | GO:0008649: rRNA methyltransferase activity | 3.61E-04 |
| 30 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 5.20E-04 |
| 31 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 5.20E-04 |
| 32 | GO:0003999: adenine phosphoribosyltransferase activity | 5.20E-04 |
| 33 | GO:0008565: protein transporter activity | 7.59E-04 |
| 34 | GO:0005471: ATP:ADP antiporter activity | 8.73E-04 |
| 35 | GO:0031369: translation initiation factor binding | 1.07E-03 |
| 36 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.07E-03 |
| 37 | GO:0008195: phosphatidate phosphatase activity | 1.27E-03 |
| 38 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.27E-03 |
| 39 | GO:0008320: protein transmembrane transporter activity | 1.49E-03 |
| 40 | GO:0015288: porin activity | 1.72E-03 |
| 41 | GO:0008308: voltage-gated anion channel activity | 1.96E-03 |
| 42 | GO:0001054: RNA polymerase I activity | 3.03E-03 |
| 43 | GO:0004129: cytochrome-c oxidase activity | 3.03E-03 |
| 44 | GO:0001056: RNA polymerase III activity | 3.32E-03 |
| 45 | GO:0003924: GTPase activity | 3.33E-03 |
| 46 | GO:0015114: phosphate ion transmembrane transporter activity | 3.63E-03 |
| 47 | GO:0004175: endopeptidase activity | 3.93E-03 |
| 48 | GO:0008266: poly(U) RNA binding | 3.93E-03 |
| 49 | GO:0004190: aspartic-type endopeptidase activity | 4.26E-03 |
| 50 | GO:0051536: iron-sulfur cluster binding | 4.92E-03 |
| 51 | GO:0004540: ribonuclease activity | 5.62E-03 |
| 52 | GO:0016779: nucleotidyltransferase activity | 5.98E-03 |
| 53 | GO:0003756: protein disulfide isomerase activity | 6.73E-03 |
| 54 | GO:0000166: nucleotide binding | 6.89E-03 |
| 55 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 7.91E-03 |
| 56 | GO:0010181: FMN binding | 8.32E-03 |
| 57 | GO:0050662: coenzyme binding | 8.32E-03 |
| 58 | GO:0000287: magnesium ion binding | 1.02E-02 |
| 59 | GO:0008483: transaminase activity | 1.09E-02 |
| 60 | GO:0008233: peptidase activity | 1.27E-02 |
| 61 | GO:0004222: metalloendopeptidase activity | 1.54E-02 |
| 62 | GO:0050897: cobalt ion binding | 1.59E-02 |
| 63 | GO:0003697: single-stranded DNA binding | 1.69E-02 |
| 64 | GO:0050661: NADP binding | 1.86E-02 |
| 65 | GO:0009055: electron carrier activity | 2.05E-02 |
| 66 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.14E-02 |
| 67 | GO:0005198: structural molecule activity | 2.20E-02 |
| 68 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.26E-02 |
| 69 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.51E-02 |
| 70 | GO:0003690: double-stranded DNA binding | 2.57E-02 |
| 71 | GO:0003729: mRNA binding | 2.78E-02 |
| 72 | GO:0004650: polygalacturonase activity | 3.02E-02 |
| 73 | GO:0003723: RNA binding | 3.03E-02 |
| 74 | GO:0051082: unfolded protein binding | 3.22E-02 |
| 75 | GO:0016746: transferase activity, transferring acyl groups | 3.29E-02 |
| 76 | GO:0019843: rRNA binding | 3.78E-02 |
| 77 | GO:0016829: lyase activity | 4.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 3 | GO:0005774: vacuolar membrane | 2.95E-10 |
| 4 | GO:0005730: nucleolus | 1.11E-08 |
| 5 | GO:0005739: mitochondrion | 1.12E-08 |
| 6 | GO:0005740: mitochondrial envelope | 1.16E-08 |
| 7 | GO:0005750: mitochondrial respiratory chain complex III | 4.36E-08 |
| 8 | GO:0005783: endoplasmic reticulum | 2.08E-07 |
| 9 | GO:0005773: vacuole | 3.94E-07 |
| 10 | GO:0008250: oligosaccharyltransferase complex | 1.28E-05 |
| 11 | GO:0005747: mitochondrial respiratory chain complex I | 2.69E-05 |
| 12 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 9.14E-05 |
| 13 | GO:0015030: Cajal body | 9.45E-05 |
| 14 | GO:0032040: small-subunit processome | 1.54E-04 |
| 15 | GO:0005840: ribosome | 1.89E-04 |
| 16 | GO:0070545: PeBoW complex | 2.16E-04 |
| 17 | GO:0000015: phosphopyruvate hydratase complex | 2.16E-04 |
| 18 | GO:0030134: ER to Golgi transport vesicle | 2.16E-04 |
| 19 | GO:0005758: mitochondrial intermembrane space | 2.85E-04 |
| 20 | GO:0000502: proteasome complex | 2.89E-04 |
| 21 | GO:0005839: proteasome core complex | 3.47E-04 |
| 22 | GO:0005741: mitochondrial outer membrane | 3.47E-04 |
| 23 | GO:1990726: Lsm1-7-Pat1 complex | 5.20E-04 |
| 24 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 6.90E-04 |
| 25 | GO:0030660: Golgi-associated vesicle membrane | 6.90E-04 |
| 26 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 6.90E-04 |
| 27 | GO:0032580: Golgi cisterna membrane | 8.34E-04 |
| 28 | GO:0005746: mitochondrial respiratory chain | 8.73E-04 |
| 29 | GO:0005788: endoplasmic reticulum lumen | 1.04E-03 |
| 30 | GO:0032588: trans-Golgi network membrane | 1.07E-03 |
| 31 | GO:0031428: box C/D snoRNP complex | 1.07E-03 |
| 32 | GO:0016363: nuclear matrix | 1.27E-03 |
| 33 | GO:0009506: plasmodesma | 1.37E-03 |
| 34 | GO:0030687: preribosome, large subunit precursor | 1.49E-03 |
| 35 | GO:0045273: respiratory chain complex II | 1.72E-03 |
| 36 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 1.72E-03 |
| 37 | GO:0005688: U6 snRNP | 1.72E-03 |
| 38 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.72E-03 |
| 39 | GO:0005789: endoplasmic reticulum membrane | 1.80E-03 |
| 40 | GO:0046930: pore complex | 1.96E-03 |
| 41 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.96E-03 |
| 42 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 1.96E-03 |
| 43 | GO:0022625: cytosolic large ribosomal subunit | 2.17E-03 |
| 44 | GO:0005763: mitochondrial small ribosomal subunit | 2.21E-03 |
| 45 | GO:0005736: DNA-directed RNA polymerase I complex | 2.21E-03 |
| 46 | GO:0031901: early endosome membrane | 2.21E-03 |
| 47 | GO:0005829: cytosol | 2.35E-03 |
| 48 | GO:0005666: DNA-directed RNA polymerase III complex | 2.48E-03 |
| 49 | GO:0009507: chloroplast | 2.54E-03 |
| 50 | GO:0005765: lysosomal membrane | 3.03E-03 |
| 51 | GO:0005852: eukaryotic translation initiation factor 3 complex | 3.03E-03 |
| 52 | GO:0005743: mitochondrial inner membrane | 3.04E-03 |
| 53 | GO:0005834: heterotrimeric G-protein complex | 3.45E-03 |
| 54 | GO:0019013: viral nucleocapsid | 3.63E-03 |
| 55 | GO:0016020: membrane | 4.02E-03 |
| 56 | GO:0005732: small nucleolar ribonucleoprotein complex | 4.24E-03 |
| 57 | GO:0030176: integral component of endoplasmic reticulum membrane | 4.26E-03 |
| 58 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 4.26E-03 |
| 59 | GO:0005623: cell | 4.99E-03 |
| 60 | GO:0070469: respiratory chain | 5.27E-03 |
| 61 | GO:0009536: plastid | 5.30E-03 |
| 62 | GO:0022626: cytosolic ribosome | 6.52E-03 |
| 63 | GO:0005794: Golgi apparatus | 8.00E-03 |
| 64 | GO:0005618: cell wall | 9.53E-03 |
| 65 | GO:0005886: plasma membrane | 2.69E-02 |
| 66 | GO:0005681: spliceosomal complex | 2.82E-02 |
| 67 | GO:0005654: nucleoplasm | 3.71E-02 |
| 68 | GO:0009941: chloroplast envelope | 3.94E-02 |