GO Enrichment Analysis of Co-expressed Genes with
AT2G45270
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 2 | GO:0060416: response to growth hormone | 0.00E+00 |
| 3 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006412: translation | 3.32E-06 |
| 5 | GO:0032544: plastid translation | 2.16E-05 |
| 6 | GO:0043489: RNA stabilization | 4.60E-05 |
| 7 | GO:0042371: vitamin K biosynthetic process | 4.60E-05 |
| 8 | GO:0071588: hydrogen peroxide mediated signaling pathway | 4.60E-05 |
| 9 | GO:0006438: valyl-tRNA aminoacylation | 4.60E-05 |
| 10 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.13E-04 |
| 11 | GO:0080148: negative regulation of response to water deprivation | 1.13E-04 |
| 12 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.13E-04 |
| 13 | GO:0006418: tRNA aminoacylation for protein translation | 1.23E-04 |
| 14 | GO:0006954: inflammatory response | 1.95E-04 |
| 15 | GO:0006518: peptide metabolic process | 1.95E-04 |
| 16 | GO:0016556: mRNA modification | 2.85E-04 |
| 17 | GO:0006808: regulation of nitrogen utilization | 3.84E-04 |
| 18 | GO:0006749: glutathione metabolic process | 3.84E-04 |
| 19 | GO:0032543: mitochondrial translation | 4.88E-04 |
| 20 | GO:0009247: glycolipid biosynthetic process | 4.88E-04 |
| 21 | GO:0042254: ribosome biogenesis | 5.17E-04 |
| 22 | GO:0006561: proline biosynthetic process | 5.98E-04 |
| 23 | GO:0010405: arabinogalactan protein metabolic process | 5.98E-04 |
| 24 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 5.98E-04 |
| 25 | GO:0009631: cold acclimation | 6.19E-04 |
| 26 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.89E-04 |
| 27 | GO:0010019: chloroplast-nucleus signaling pathway | 7.13E-04 |
| 28 | GO:0009610: response to symbiotic fungus | 8.33E-04 |
| 29 | GO:0009395: phospholipid catabolic process | 8.33E-04 |
| 30 | GO:0019375: galactolipid biosynthetic process | 9.57E-04 |
| 31 | GO:0009704: de-etiolation | 9.57E-04 |
| 32 | GO:0000373: Group II intron splicing | 1.22E-03 |
| 33 | GO:0010205: photoinhibition | 1.36E-03 |
| 34 | GO:0009688: abscisic acid biosynthetic process | 1.51E-03 |
| 35 | GO:0009073: aromatic amino acid family biosynthetic process | 1.66E-03 |
| 36 | GO:0009750: response to fructose | 1.66E-03 |
| 37 | GO:0009773: photosynthetic electron transport in photosystem I | 1.66E-03 |
| 38 | GO:0010628: positive regulation of gene expression | 1.98E-03 |
| 39 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.49E-03 |
| 40 | GO:0055114: oxidation-reduction process | 3.08E-03 |
| 41 | GO:0016226: iron-sulfur cluster assembly | 3.23E-03 |
| 42 | GO:0010182: sugar mediated signaling pathway | 4.25E-03 |
| 43 | GO:0000302: response to reactive oxygen species | 4.91E-03 |
| 44 | GO:0010027: thylakoid membrane organization | 6.32E-03 |
| 45 | GO:0006397: mRNA processing | 8.02E-03 |
| 46 | GO:0009407: toxin catabolic process | 8.14E-03 |
| 47 | GO:0048527: lateral root development | 8.41E-03 |
| 48 | GO:0007568: aging | 8.41E-03 |
| 49 | GO:0045087: innate immune response | 8.96E-03 |
| 50 | GO:0034599: cellular response to oxidative stress | 9.25E-03 |
| 51 | GO:0051707: response to other organism | 1.07E-02 |
| 52 | GO:0009636: response to toxic substance | 1.16E-02 |
| 53 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.35E-02 |
| 54 | GO:0006417: regulation of translation | 1.42E-02 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 1.54E-02 |
| 56 | GO:0006396: RNA processing | 1.73E-02 |
| 57 | GO:0042744: hydrogen peroxide catabolic process | 2.18E-02 |
| 58 | GO:0009790: embryo development | 2.22E-02 |
| 59 | GO:0006633: fatty acid biosynthetic process | 2.34E-02 |
| 60 | GO:0040008: regulation of growth | 2.42E-02 |
| 61 | GO:0009451: RNA modification | 2.54E-02 |
| 62 | GO:0007166: cell surface receptor signaling pathway | 2.75E-02 |
| 63 | GO:0080167: response to karrikin | 3.98E-02 |
| 64 | GO:0015979: photosynthesis | 4.37E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0019843: rRNA binding | 8.79E-11 |
| 5 | GO:0003735: structural constituent of ribosome | 9.07E-07 |
| 6 | GO:0004832: valine-tRNA ligase activity | 4.60E-05 |
| 7 | GO:0004328: formamidase activity | 4.60E-05 |
| 8 | GO:0045485: omega-6 fatty acid desaturase activity | 4.60E-05 |
| 9 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.13E-04 |
| 10 | GO:0017150: tRNA dihydrouridine synthase activity | 1.95E-04 |
| 11 | GO:0002161: aminoacyl-tRNA editing activity | 1.95E-04 |
| 12 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.95E-04 |
| 13 | GO:0004812: aminoacyl-tRNA ligase activity | 1.97E-04 |
| 14 | GO:0035250: UDP-galactosyltransferase activity | 2.85E-04 |
| 15 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 2.85E-04 |
| 16 | GO:0016688: L-ascorbate peroxidase activity | 5.98E-04 |
| 17 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 5.98E-04 |
| 18 | GO:0004130: cytochrome-c peroxidase activity | 5.98E-04 |
| 19 | GO:0016491: oxidoreductase activity | 1.47E-03 |
| 20 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.98E-03 |
| 21 | GO:0008266: poly(U) RNA binding | 2.14E-03 |
| 22 | GO:0051536: iron-sulfur cluster binding | 2.67E-03 |
| 23 | GO:0016788: hydrolase activity, acting on ester bonds | 4.29E-03 |
| 24 | GO:0010181: FMN binding | 4.47E-03 |
| 25 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 5.84E-03 |
| 26 | GO:0004222: metalloendopeptidase activity | 8.14E-03 |
| 27 | GO:0004672: protein kinase activity | 8.66E-03 |
| 28 | GO:0003993: acid phosphatase activity | 9.25E-03 |
| 29 | GO:0004364: glutathione transferase activity | 1.04E-02 |
| 30 | GO:0004185: serine-type carboxypeptidase activity | 1.07E-02 |
| 31 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.19E-02 |
| 32 | GO:0030246: carbohydrate binding | 1.84E-02 |
| 33 | GO:0016758: transferase activity, transferring hexosyl groups | 1.95E-02 |
| 34 | GO:0003723: RNA binding | 2.17E-02 |
| 35 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.38E-02 |
| 36 | GO:0008194: UDP-glycosyltransferase activity | 2.71E-02 |
| 37 | GO:0003824: catalytic activity | 3.04E-02 |
| 38 | GO:0000287: magnesium ion binding | 3.37E-02 |
| 39 | GO:0050660: flavin adenine dinucleotide binding | 3.79E-02 |
| 40 | GO:0004674: protein serine/threonine kinase activity | 3.97E-02 |
| 41 | GO:0052689: carboxylic ester hydrolase activity | 4.27E-02 |
| 42 | GO:0020037: heme binding | 4.36E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.76E-16 |
| 2 | GO:0009570: chloroplast stroma | 1.01E-13 |
| 3 | GO:0009941: chloroplast envelope | 1.03E-09 |
| 4 | GO:0005840: ribosome | 1.37E-06 |
| 5 | GO:0009295: nucleoid | 1.25E-05 |
| 6 | GO:0000312: plastid small ribosomal subunit | 7.57E-05 |
| 7 | GO:0030529: intracellular ribonucleoprotein complex | 4.15E-04 |
| 8 | GO:0015934: large ribosomal subunit | 6.19E-04 |
| 9 | GO:0009535: chloroplast thylakoid membrane | 7.06E-04 |
| 10 | GO:0009706: chloroplast inner membrane | 1.60E-03 |
| 11 | GO:0000311: plastid large ribosomal subunit | 1.81E-03 |
| 12 | GO:0009508: plastid chromosome | 1.98E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 2.00E-03 |
| 14 | GO:0009534: chloroplast thylakoid | 2.77E-03 |
| 15 | GO:0022627: cytosolic small ribosomal subunit | 3.61E-03 |
| 16 | GO:0009579: thylakoid | 1.64E-02 |
| 17 | GO:0009536: plastid | 3.40E-02 |
| 18 | GO:0009505: plant-type cell wall | 3.47E-02 |
| 19 | GO:0022625: cytosolic large ribosomal subunit | 4.13E-02 |