co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015822: ornithine transport	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
4	GO:0051503: adenine nucleotide transport	0.00E+00
5	GO:0061635: regulation of protein complex stability	0.00E+00
6	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
7	GO:0017038: protein import	0.00E+00
8	GO:0000372: Group I intron splicing	0.00E+00
9	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
10	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
11	GO:0034755: iron ion transmembrane transport	4.91E-06
12	GO:0006000: fructose metabolic process	1.74E-05
13	GO:0042549: photosystem II stabilization	1.56E-04
14	GO:0042631: cellular response to water deprivation	3.18E-04
15	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	3.29E-04
16	GO:0043609: regulation of carbon utilization	3.29E-04
17	GO:0000066: mitochondrial ornithine transport	3.29E-04
18	GO:0034337: RNA folding	3.29E-04
19	GO:0016119: carotene metabolic process	3.29E-04
20	GO:0000476: maturation of 4.5S rRNA	3.29E-04
21	GO:0051180: vitamin transport	3.29E-04
22	GO:0000967: rRNA 5'-end processing	3.29E-04
23	GO:0030974: thiamine pyrophosphate transport	3.29E-04
24	GO:0006824: cobalt ion transport	3.29E-04
25	GO:0010480: microsporocyte differentiation	3.29E-04
26	GO:0006723: cuticle hydrocarbon biosynthetic process	3.29E-04
27	GO:0000481: maturation of 5S rRNA	3.29E-04
28	GO:0042547: cell wall modification involved in multidimensional cell growth	3.29E-04
29	GO:0008610: lipid biosynthetic process	3.48E-04
30	GO:0006002: fructose 6-phosphate metabolic process	4.26E-04
31	GO:0010206: photosystem II repair	5.12E-04
32	GO:0048507: meristem development	5.12E-04
33	GO:0000373: Group II intron splicing	5.12E-04
34	GO:0010090: trichome morphogenesis	5.49E-04
35	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	7.18E-04
36	GO:0030388: fructose 1,6-bisphosphate metabolic process	7.18E-04
37	GO:0010270: photosystem II oxygen evolving complex assembly	7.18E-04
38	GO:0034470: ncRNA processing	7.18E-04
39	GO:0015893: drug transport	7.18E-04
40	GO:0009773: photosynthetic electron transport in photosystem I	8.13E-04
41	GO:0006094: gluconeogenesis	1.05E-03
42	GO:2000082: regulation of L-ascorbic acid biosynthetic process	1.16E-03
43	GO:0043447: alkane biosynthetic process	1.16E-03
44	GO:0006013: mannose metabolic process	1.16E-03
45	GO:0043617: cellular response to sucrose starvation	1.16E-03
46	GO:0051176: positive regulation of sulfur metabolic process	1.16E-03
47	GO:0010207: photosystem II assembly	1.18E-03
48	GO:0009735: response to cytokinin	1.42E-03
49	GO:0046902: regulation of mitochondrial membrane permeability	1.67E-03
50	GO:0007623: circadian rhythm	1.79E-03
51	GO:0061077: chaperone-mediated protein folding	1.97E-03
52	GO:0006629: lipid metabolic process	2.22E-03
53	GO:0006542: glutamine biosynthetic process	2.24E-03
54	GO:0010109: regulation of photosynthesis	2.24E-03
55	GO:0019676: ammonia assimilation cycle	2.24E-03
56	GO:0045727: positive regulation of translation	2.24E-03
57	GO:0015994: chlorophyll metabolic process	2.24E-03
58	GO:2000038: regulation of stomatal complex development	2.24E-03
59	GO:0006364: rRNA processing	2.81E-03
60	GO:0016123: xanthophyll biosynthetic process	2.87E-03
61	GO:0009435: NAD biosynthetic process	2.87E-03
62	GO:0032876: negative regulation of DNA endoreduplication	2.87E-03
63	GO:0030308: negative regulation of cell growth	2.87E-03
64	GO:0046785: microtubule polymerization	2.87E-03
65	GO:0016120: carotene biosynthetic process	2.87E-03
66	GO:0043097: pyrimidine nucleoside salvage	2.87E-03
67	GO:0045038: protein import into chloroplast thylakoid membrane	2.87E-03
68	GO:0042335: cuticle development	3.00E-03
69	GO:0009646: response to absence of light	3.47E-03
70	GO:0009658: chloroplast organization	3.50E-03
71	GO:0006354: DNA-templated transcription, elongation	3.54E-03
72	GO:0010304: PSII associated light-harvesting complex II catabolic process	3.54E-03
73	GO:0000470: maturation of LSU-rRNA	3.54E-03
74	GO:0009913: epidermal cell differentiation	3.54E-03
75	GO:0006828: manganese ion transport	3.54E-03
76	GO:0006206: pyrimidine nucleobase metabolic process	3.54E-03
77	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	3.54E-03
78	GO:0000741: karyogamy	3.54E-03
79	GO:0009854: oxidative photosynthetic carbon pathway	4.26E-03
80	GO:0010019: chloroplast-nucleus signaling pathway	4.26E-03
81	GO:2000037: regulation of stomatal complex patterning	4.26E-03
82	GO:0042026: protein refolding	4.26E-03
83	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.26E-03
84	GO:0006458: 'de novo' protein folding	4.26E-03
85	GO:0030163: protein catabolic process	4.54E-03
86	GO:0055114: oxidation-reduction process	4.67E-03
87	GO:0009772: photosynthetic electron transport in photosystem II	5.03E-03
88	GO:1900056: negative regulation of leaf senescence	5.03E-03
89	GO:0048437: floral organ development	5.03E-03
90	GO:1900057: positive regulation of leaf senescence	5.03E-03
91	GO:0051510: regulation of unidimensional cell growth	5.03E-03
92	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.11E-03
93	GO:0005975: carbohydrate metabolic process	5.38E-03
94	GO:0010492: maintenance of shoot apical meristem identity	5.85E-03
95	GO:0048564: photosystem I assembly	5.85E-03
96	GO:0006402: mRNA catabolic process	5.85E-03
97	GO:0009850: auxin metabolic process	5.85E-03
98	GO:0006605: protein targeting	5.85E-03
99	GO:0032508: DNA duplex unwinding	5.85E-03
100	GO:0015979: photosynthesis	5.94E-03
101	GO:0009416: response to light stimulus	6.07E-03
102	GO:0009058: biosynthetic process	6.27E-03
103	GO:0042128: nitrate assimilation	6.44E-03
104	GO:0009932: cell tip growth	6.71E-03
105	GO:0071482: cellular response to light stimulus	6.71E-03
106	GO:0009657: plastid organization	6.71E-03
107	GO:0032544: plastid translation	6.71E-03
108	GO:0015995: chlorophyll biosynthetic process	6.79E-03
109	GO:0009060: aerobic respiration	7.60E-03
110	GO:0009051: pentose-phosphate shunt, oxidative branch	7.60E-03
111	GO:0009821: alkaloid biosynthetic process	7.60E-03
112	GO:0006098: pentose-phosphate shunt	7.60E-03
113	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.60E-03
114	GO:0048589: developmental growth	7.60E-03
115	GO:0010205: photoinhibition	8.55E-03
116	GO:0010380: regulation of chlorophyll biosynthetic process	8.55E-03
117	GO:0009910: negative regulation of flower development	8.71E-03
118	GO:0009853: photorespiration	9.55E-03
119	GO:0008152: metabolic process	1.02E-02
120	GO:0048229: gametophyte development	1.06E-02
121	GO:0000038: very long-chain fatty acid metabolic process	1.06E-02
122	GO:0006816: calcium ion transport	1.06E-02
123	GO:0043085: positive regulation of catalytic activity	1.06E-02
124	GO:0006879: cellular iron ion homeostasis	1.06E-02
125	GO:0009750: response to fructose	1.06E-02
126	GO:0018119: peptidyl-cysteine S-nitrosylation	1.06E-02
127	GO:0006839: mitochondrial transport	1.09E-02
128	GO:0009737: response to abscisic acid	1.11E-02
129	GO:0008361: regulation of cell size	1.16E-02
130	GO:0005983: starch catabolic process	1.16E-02
131	GO:0010152: pollen maturation	1.16E-02
132	GO:2000028: regulation of photoperiodism, flowering	1.27E-02
133	GO:0018107: peptidyl-threonine phosphorylation	1.27E-02
134	GO:0009718: anthocyanin-containing compound biosynthetic process	1.27E-02
135	GO:0010075: regulation of meristem growth	1.27E-02
136	GO:0009767: photosynthetic electron transport chain	1.27E-02
137	GO:0005986: sucrose biosynthetic process	1.27E-02
138	GO:0030048: actin filament-based movement	1.27E-02
139	GO:0006006: glucose metabolic process	1.27E-02
140	GO:0009644: response to high light intensity	1.34E-02
141	GO:0009934: regulation of meristem structural organization	1.38E-02
142	GO:0048768: root hair cell tip growth	1.38E-02
143	GO:0019253: reductive pentose-phosphate cycle	1.38E-02
144	GO:0006810: transport	1.44E-02
145	GO:0010053: root epidermal cell differentiation	1.50E-02
146	GO:0010030: positive regulation of seed germination	1.50E-02
147	GO:0010025: wax biosynthetic process	1.62E-02
148	GO:0006289: nucleotide-excision repair	1.75E-02
149	GO:0006418: tRNA aminoacylation for protein translation	1.87E-02
150	GO:0006096: glycolytic process	1.97E-02
151	GO:0080092: regulation of pollen tube growth	2.14E-02
152	GO:0009814: defense response, incompatible interaction	2.14E-02
153	GO:0016226: iron-sulfur cluster assembly	2.14E-02
154	GO:0009686: gibberellin biosynthetic process	2.27E-02
155	GO:0071369: cellular response to ethylene stimulus	2.27E-02
156	GO:0048443: stamen development	2.41E-02
157	GO:0016117: carotenoid biosynthetic process	2.55E-02
158	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.55E-02
159	GO:0048653: anther development	2.70E-02
160	GO:0010197: polar nucleus fusion	2.85E-02
161	GO:0009741: response to brassinosteroid	2.85E-02
162	GO:0010268: brassinosteroid homeostasis	2.85E-02
163	GO:0010305: leaf vascular tissue pattern formation	2.85E-02
164	GO:0055085: transmembrane transport	2.96E-02
165	GO:0009791: post-embryonic development	3.15E-02
166	GO:0016132: brassinosteroid biosynthetic process	3.31E-02
167	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	3.31E-02
168	GO:0006397: mRNA processing	3.47E-02
169	GO:0048364: root development	3.47E-02
170	GO:0016032: viral process	3.47E-02
171	GO:0048235: pollen sperm cell differentiation	3.47E-02
172	GO:0006468: protein phosphorylation	3.59E-02
173	GO:0016125: sterol metabolic process	3.79E-02
174	GO:0071805: potassium ion transmembrane transport	3.96E-02
175	GO:0009451: RNA modification	4.19E-02
176	GO:0016126: sterol biosynthetic process	4.30E-02
177	GO:0001666: response to hypoxia	4.30E-02

Rank	GO Term	Adjusted P value
1	GO:0008465: glycerate dehydrogenase activity	0.00E+00
2	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
3	GO:1990534: thermospermine oxidase activity	0.00E+00
4	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
5	GO:0045436: lycopene beta cyclase activity	0.00E+00
6	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
7	GO:0008987: quinolinate synthetase A activity	0.00E+00
8	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
9	GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity	0.00E+00
10	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
11	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
12	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
13	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
14	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
15	GO:0008974: phosphoribulokinase activity	0.00E+00
16	GO:0005528: FK506 binding	5.33E-06
17	GO:0046906: tetrapyrrole binding	3.29E-04
18	GO:0090422: thiamine pyrophosphate transporter activity	3.29E-04
19	GO:0051777: ent-kaurenoate oxidase activity	3.29E-04
20	GO:0004856: xylulokinase activity	3.29E-04
21	GO:0052638: indole-3-butyrate beta-glucosyltransferase activity	3.29E-04
22	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.64E-04
23	GO:0016787: hydrolase activity	5.15E-04
24	GO:0005381: iron ion transmembrane transporter activity	6.05E-04
25	GO:0010291: carotene beta-ring hydroxylase activity	7.18E-04
26	GO:0047746: chlorophyllase activity	7.18E-04
27	GO:0005094: Rho GDP-dissociation inhibitor activity	7.18E-04
28	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	7.18E-04
29	GO:0000064: L-ornithine transmembrane transporter activity	7.18E-04
30	GO:0015929: hexosaminidase activity	7.18E-04
31	GO:0004563: beta-N-acetylhexosaminidase activity	7.18E-04
32	GO:0004565: beta-galactosidase activity	1.05E-03
33	GO:0008081: phosphoric diester hydrolase activity	1.05E-03
34	GO:0019843: rRNA binding	1.10E-03
35	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	1.16E-03
36	GO:0015462: ATPase-coupled protein transmembrane transporter activity	1.16E-03
37	GO:0004180: carboxypeptidase activity	1.16E-03
38	GO:0002161: aminoacyl-tRNA editing activity	1.16E-03
39	GO:0004148: dihydrolipoyl dehydrogenase activity	1.16E-03
40	GO:0016805: dipeptidase activity	1.16E-03
41	GO:0008266: poly(U) RNA binding	1.18E-03
42	GO:0004176: ATP-dependent peptidase activity	1.97E-03
43	GO:0010011: auxin binding	2.24E-03
44	GO:0004345: glucose-6-phosphate dehydrogenase activity	2.24E-03
45	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	2.24E-03
46	GO:0008453: alanine-glyoxylate transaminase activity	2.24E-03
47	GO:0070628: proteasome binding	2.24E-03
48	GO:0004506: squalene monooxygenase activity	2.24E-03
49	GO:0005471: ATP:ADP antiporter activity	2.87E-03
50	GO:0004356: glutamate-ammonia ligase activity	2.87E-03
51	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.87E-03
52	GO:2001070: starch binding	3.54E-03
53	GO:0004332: fructose-bisphosphate aldolase activity	3.54E-03
54	GO:0031593: polyubiquitin binding	3.54E-03
55	GO:0042578: phosphoric ester hydrolase activity	3.54E-03
56	GO:0004559: alpha-mannosidase activity	4.26E-03
57	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.26E-03
58	GO:0004849: uridine kinase activity	4.26E-03
59	GO:0004518: nuclease activity	4.26E-03
60	GO:0019899: enzyme binding	5.03E-03
61	GO:0043022: ribosome binding	5.85E-03
62	GO:0071949: FAD binding	7.60E-03
63	GO:0016844: strictosidine synthase activity	8.55E-03
64	GO:0005384: manganese ion transmembrane transporter activity	8.55E-03
65	GO:0005524: ATP binding	8.73E-03
66	GO:0008017: microtubule binding	9.37E-03
67	GO:0008047: enzyme activator activity	9.53E-03
68	GO:0044183: protein binding involved in protein folding	1.06E-02
69	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.06E-02
70	GO:0016491: oxidoreductase activity	1.16E-02
71	GO:0000049: tRNA binding	1.16E-02
72	GO:0042802: identical protein binding	1.20E-02
73	GO:0004674: protein serine/threonine kinase activity	1.22E-02
74	GO:0015095: magnesium ion transmembrane transporter activity	1.27E-02
75	GO:0004022: alcohol dehydrogenase (NAD) activity	1.27E-02
76	GO:0003774: motor activity	1.38E-02
77	GO:0008131: primary amine oxidase activity	1.38E-02
78	GO:0004190: aspartic-type endopeptidase activity	1.50E-02
79	GO:0008146: sulfotransferase activity	1.50E-02
80	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.62E-02
81	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.62E-02
82	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.62E-02
83	GO:0016298: lipase activity	1.73E-02
84	GO:0003723: RNA binding	1.73E-02
85	GO:0043130: ubiquitin binding	1.75E-02
86	GO:0015079: potassium ion transmembrane transporter activity	1.87E-02
87	GO:0033612: receptor serine/threonine kinase binding	2.00E-02
88	GO:0016779: nucleotidyltransferase activity	2.14E-02
89	GO:0022891: substrate-specific transmembrane transporter activity	2.27E-02
90	GO:0030570: pectate lyase activity	2.27E-02
91	GO:0003727: single-stranded RNA binding	2.41E-02
92	GO:0003824: catalytic activity	2.41E-02
93	GO:0005215: transporter activity	2.44E-02
94	GO:0004812: aminoacyl-tRNA ligase activity	2.55E-02
95	GO:0050662: coenzyme binding	3.00E-02
96	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.06E-02
97	GO:0016829: lyase activity	3.22E-02
98	GO:0016301: kinase activity	3.25E-02
99	GO:0000156: phosphorelay response regulator activity	3.63E-02
100	GO:0003684: damaged DNA binding	3.79E-02
101	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	3.83E-02
102	GO:0008237: metallopeptidase activity	3.96E-02
103	GO:0016168: chlorophyll binding	4.47E-02
104	GO:0003743: translation initiation factor activity	4.78E-02
105	GO:0005515: protein binding	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
3	GO:0009507: chloroplast	4.98E-20
4	GO:0009535: chloroplast thylakoid membrane	1.27E-13
5	GO:0009570: chloroplast stroma	1.54E-12
6	GO:0009534: chloroplast thylakoid	4.94E-11
7	GO:0009941: chloroplast envelope	3.79E-08
8	GO:0009579: thylakoid	6.18E-07
9	GO:0009543: chloroplast thylakoid lumen	1.62E-06
10	GO:0009344: nitrite reductase complex [NAD(P)H]	3.29E-04
11	GO:0000428: DNA-directed RNA polymerase complex	3.29E-04
12	GO:0055028: cortical microtubule	7.06E-04
13	GO:0080085: signal recognition particle, chloroplast targeting	7.18E-04
14	GO:0030529: intracellular ribonucleoprotein complex	7.44E-04
15	GO:0000312: plastid small ribosomal subunit	1.18E-03
16	GO:0048046: apoplast	2.24E-03
17	GO:0030660: Golgi-associated vesicle membrane	2.24E-03
18	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	2.24E-03
19	GO:0009523: photosystem II	3.72E-03
20	GO:0031969: chloroplast membrane	4.85E-03
21	GO:0009533: chloroplast stromal thylakoid	5.03E-03
22	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	5.85E-03
23	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	6.71E-03
24	GO:0005763: mitochondrial small ribosomal subunit	7.60E-03
25	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	7.60E-03
26	GO:0008180: COP9 signalosome	7.60E-03
27	GO:0016459: myosin complex	9.53E-03
28	GO:0016324: apical plasma membrane	9.53E-03
29	GO:0005765: lysosomal membrane	1.06E-02
30	GO:0032040: small-subunit processome	1.16E-02
31	GO:0030095: chloroplast photosystem II	1.38E-02
32	GO:0009654: photosystem II oxygen evolving complex	1.87E-02
33	GO:0009532: plastid stroma	2.00E-02
34	GO:0005777: peroxisome	2.56E-02
35	GO:0005886: plasma membrane	2.74E-02
36	GO:0010287: plastoglobule	2.82E-02
37	GO:0009505: plant-type cell wall	3.00E-02
38	GO:0009522: photosystem I	3.00E-02
39	GO:0005743: mitochondrial inner membrane	3.01E-02
40	GO:0019898: extrinsic component of membrane	3.15E-02
41	GO:0016021: integral component of membrane	3.57E-02
42	GO:0043231: intracellular membrane-bounded organelle	3.72E-02
43	GO:0005759: mitochondrial matrix	3.74E-02
44	GO:0010319: stromule	3.96E-02
45	GO:0009295: nucleoid	3.96E-02
46	GO:0005789: endoplasmic reticulum membrane	4.16E-02