co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45070

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006182: cGMP biosynthetic process	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0044794: positive regulation by host of viral process	0.00E+00
4	GO:0042430: indole-containing compound metabolic process	0.00E+00
5	GO:0002376: immune system process	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:0006457: protein folding	4.10E-13
8	GO:0034976: response to endoplasmic reticulum stress	3.23E-08
9	GO:0006099: tricarboxylic acid cycle	2.79E-07
10	GO:0042742: defense response to bacterium	1.36E-06
11	GO:0046686: response to cadmium ion	1.61E-06
12	GO:0009617: response to bacterium	2.64E-06
13	GO:0006102: isocitrate metabolic process	5.41E-06
14	GO:0006952: defense response	7.77E-06
15	GO:0030968: endoplasmic reticulum unfolded protein response	7.85E-06
16	GO:0010150: leaf senescence	1.93E-05
17	GO:0009615: response to virus	3.77E-05
18	GO:0009697: salicylic acid biosynthetic process	7.21E-05
19	GO:0043248: proteasome assembly	1.05E-04
20	GO:0010942: positive regulation of cell death	1.05E-04
21	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.45E-04
22	GO:0006468: protein phosphorylation	1.48E-04
23	GO:0045454: cell redox homeostasis	1.59E-04
24	GO:0009408: response to heat	2.54E-04
25	GO:0046104: thymidine metabolic process	2.57E-04
26	GO:0034975: protein folding in endoplasmic reticulum	2.57E-04
27	GO:1990641: response to iron ion starvation	2.57E-04
28	GO:0010726: positive regulation of hydrogen peroxide metabolic process	2.57E-04
29	GO:1990022: RNA polymerase III complex localization to nucleus	2.57E-04
30	GO:0043687: post-translational protein modification	2.57E-04
31	GO:0042964: thioredoxin reduction	2.57E-04
32	GO:0046244: salicylic acid catabolic process	2.57E-04
33	GO:0044376: RNA polymerase II complex import to nucleus	2.57E-04
34	GO:0060862: negative regulation of floral organ abscission	2.57E-04
35	GO:0000302: response to reactive oxygen species	2.91E-04
36	GO:0010120: camalexin biosynthetic process	2.98E-04
37	GO:0030163: protein catabolic process	3.47E-04
38	GO:0006032: chitin catabolic process	4.99E-04
39	GO:0045901: positive regulation of translational elongation	5.68E-04
40	GO:0006452: translational frameshifting	5.68E-04
41	GO:0031349: positive regulation of defense response	5.68E-04
42	GO:0006101: citrate metabolic process	5.68E-04
43	GO:0019752: carboxylic acid metabolic process	5.68E-04
44	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.68E-04
45	GO:0045905: positive regulation of translational termination	5.68E-04
46	GO:0010272: response to silver ion	9.22E-04
47	GO:0055074: calcium ion homeostasis	9.22E-04
48	GO:0010167: response to nitrate	9.38E-04
49	GO:0002239: response to oomycetes	1.32E-03
50	GO:0072334: UDP-galactose transmembrane transport	1.32E-03
51	GO:0015696: ammonium transport	1.32E-03
52	GO:0001676: long-chain fatty acid metabolic process	1.32E-03
53	GO:0098542: defense response to other organism	1.39E-03
54	GO:0016998: cell wall macromolecule catabolic process	1.39E-03
55	GO:0006855: drug transmembrane transport	1.48E-03
56	GO:0030433: ubiquitin-dependent ERAD pathway	1.52E-03
57	GO:0031348: negative regulation of defense response	1.52E-03
58	GO:0015031: protein transport	1.65E-03
59	GO:0072488: ammonium transmembrane transport	1.76E-03
60	GO:0071897: DNA biosynthetic process	1.76E-03
61	GO:0009306: protein secretion	1.80E-03
62	GO:0007029: endoplasmic reticulum organization	2.25E-03
63	GO:0010225: response to UV-C	2.25E-03
64	GO:0018279: protein N-linked glycosylation via asparagine	2.25E-03
65	GO:0046283: anthocyanin-containing compound metabolic process	2.25E-03
66	GO:0006097: glyoxylate cycle	2.25E-03
67	GO:0009553: embryo sac development	2.68E-03
68	GO:0010256: endomembrane system organization	2.77E-03
69	GO:0047484: regulation of response to osmotic stress	2.77E-03
70	GO:0006561: proline biosynthetic process	2.77E-03
71	GO:0002229: defense response to oomycetes	2.79E-03
72	GO:0010193: response to ozone	2.79E-03
73	GO:0042372: phylloquinone biosynthetic process	3.33E-03
74	GO:1900056: negative regulation of leaf senescence	3.93E-03
75	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.93E-03
76	GO:0006508: proteolysis	4.10E-03
77	GO:0009627: systemic acquired resistance	4.49E-03
78	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.56E-03
79	GO:0009850: auxin metabolic process	4.56E-03
80	GO:0006605: protein targeting	4.56E-03
81	GO:0009751: response to salicylic acid	4.96E-03
82	GO:0009651: response to salt stress	5.05E-03
83	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	5.22E-03
84	GO:0019430: removal of superoxide radicals	5.22E-03
85	GO:0010204: defense response signaling pathway, resistance gene-independent	5.22E-03
86	GO:0009817: defense response to fungus, incompatible interaction	5.25E-03
87	GO:0008219: cell death	5.25E-03
88	GO:0006499: N-terminal protein myristoylation	5.79E-03
89	GO:0015780: nucleotide-sugar transport	5.92E-03
90	GO:0046685: response to arsenic-containing substance	5.92E-03
91	GO:0009060: aerobic respiration	5.92E-03
92	GO:0010205: photoinhibition	6.64E-03
93	GO:0043067: regulation of programmed cell death	6.64E-03
94	GO:0090332: stomatal closure	6.64E-03
95	GO:0030042: actin filament depolymerization	6.64E-03
96	GO:0045087: innate immune response	6.65E-03
97	GO:0043069: negative regulation of programmed cell death	7.40E-03
98	GO:0009682: induced systemic resistance	8.19E-03
99	GO:0000272: polysaccharide catabolic process	8.19E-03
100	GO:0016485: protein processing	8.19E-03
101	GO:0006790: sulfur compound metabolic process	9.00E-03
102	GO:0002213: defense response to insect	9.00E-03
103	GO:0015706: nitrate transport	9.00E-03
104	GO:0009636: response to toxic substance	9.66E-03
105	GO:0009718: anthocyanin-containing compound biosynthetic process	9.85E-03
106	GO:0010075: regulation of meristem growth	9.85E-03
107	GO:0009934: regulation of meristem structural organization	1.07E-02
108	GO:0006302: double-strand break repair	1.07E-02
109	GO:0002237: response to molecule of bacterial origin	1.07E-02
110	GO:0042343: indole glucosinolate metabolic process	1.16E-02
111	GO:0046854: phosphatidylinositol phosphorylation	1.16E-02
112	GO:0010187: negative regulation of seed germination	1.35E-02
113	GO:0006406: mRNA export from nucleus	1.35E-02
114	GO:0005992: trehalose biosynthetic process	1.35E-02
115	GO:0007165: signal transduction	1.40E-02
116	GO:0048316: seed development	1.42E-02
117	GO:0006874: cellular calcium ion homeostasis	1.45E-02
118	GO:0009620: response to fungus	1.51E-02
119	GO:0019748: secondary metabolic process	1.65E-02
120	GO:0009624: response to nematode	1.65E-02
121	GO:0055114: oxidation-reduction process	1.75E-02
122	GO:0010227: floral organ abscission	1.76E-02
123	GO:0010089: xylem development	1.86E-02
124	GO:0010118: stomatal movement	2.09E-02
125	GO:0008033: tRNA processing	2.09E-02
126	GO:0008360: regulation of cell shape	2.20E-02
127	GO:0006520: cellular amino acid metabolic process	2.20E-02
128	GO:0010197: polar nucleus fusion	2.20E-02
129	GO:0048868: pollen tube development	2.20E-02
130	GO:0009790: embryo development	2.42E-02
131	GO:0006623: protein targeting to vacuole	2.43E-02
132	GO:0080156: mitochondrial mRNA modification	2.56E-02
133	GO:0006891: intra-Golgi vesicle-mediated transport	2.56E-02
134	GO:0006413: translational initiation	2.67E-02
135	GO:0007264: small GTPase mediated signal transduction	2.68E-02
136	GO:0016032: viral process	2.68E-02
137	GO:0050832: defense response to fungus	2.73E-02
138	GO:0009567: double fertilization forming a zygote and endosperm	2.93E-02
139	GO:0006464: cellular protein modification process	2.93E-02
140	GO:0007166: cell surface receptor signaling pathway	3.27E-02
141	GO:0009607: response to biotic stimulus	3.46E-02
142	GO:0006979: response to oxidative stress	3.49E-02
143	GO:0042128: nitrate assimilation	3.59E-02
144	GO:0006906: vesicle fusion	3.59E-02
145	GO:0016311: dephosphorylation	3.87E-02
146	GO:0016049: cell growth	3.87E-02
147	GO:0009555: pollen development	4.28E-02
148	GO:0009407: toxin catabolic process	4.30E-02
149	GO:0007568: aging	4.45E-02
150	GO:0010043: response to zinc ion	4.45E-02
151	GO:0000724: double-strand break repair via homologous recombination	4.60E-02
152	GO:0016310: phosphorylation	4.97E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:0003756: protein disulfide isomerase activity	1.66E-07
7	GO:0005524: ATP binding	1.55E-06
8	GO:0004674: protein serine/threonine kinase activity	3.96E-06
9	GO:0051082: unfolded protein binding	4.03E-06
10	GO:0016301: kinase activity	5.95E-06
11	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.51E-05
12	GO:0005460: UDP-glucose transmembrane transporter activity	2.51E-05
13	GO:0005459: UDP-galactose transmembrane transporter activity	7.21E-05
14	GO:0002020: protease binding	7.21E-05
15	GO:0005509: calcium ion binding	2.17E-04
16	GO:0051669: fructan beta-fructosidase activity	2.57E-04
17	GO:0004797: thymidine kinase activity	2.57E-04
18	GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity	2.57E-04
19	GO:0048037: cofactor binding	2.57E-04
20	GO:0008909: isochorismate synthase activity	2.57E-04
21	GO:0031219: levanase activity	2.57E-04
22	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.57E-04
23	GO:0004568: chitinase activity	4.99E-04
24	GO:0003994: aconitate hydratase activity	5.68E-04
25	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.68E-04
26	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.68E-04
27	GO:0015238: drug transmembrane transporter activity	7.06E-04
28	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.93E-04
29	GO:0000030: mannosyltransferase activity	9.22E-04
30	GO:0005093: Rab GDP-dissociation inhibitor activity	9.22E-04
31	GO:0004148: dihydrolipoyl dehydrogenase activity	9.22E-04
32	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	9.22E-04
33	GO:0004383: guanylate cyclase activity	9.22E-04
34	GO:0010178: IAA-amino acid conjugate hydrolase activity	1.32E-03
35	GO:0004576: oligosaccharyl transferase activity	1.76E-03
36	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	2.25E-03
37	GO:0016853: isomerase activity	2.43E-03
38	GO:0010181: FMN binding	2.43E-03
39	GO:0008519: ammonium transmembrane transporter activity	2.77E-03
40	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.33E-03
41	GO:0102391: decanoate--CoA ligase activity	3.33E-03
42	GO:0004656: procollagen-proline 4-dioxygenase activity	3.33E-03
43	GO:0008237: metallopeptidase activity	3.59E-03
44	GO:0016831: carboxy-lyase activity	3.93E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	3.93E-03
46	GO:0051213: dioxygenase activity	4.03E-03
47	GO:0043022: ribosome binding	4.56E-03
48	GO:0004714: transmembrane receptor protein tyrosine kinase activity	4.56E-03
49	GO:0030247: polysaccharide binding	4.74E-03
50	GO:0004683: calmodulin-dependent protein kinase activity	4.74E-03
51	GO:0003843: 1,3-beta-D-glucan synthase activity	5.22E-03
52	GO:0015297: antiporter activity	5.27E-03
53	GO:0015112: nitrate transmembrane transporter activity	6.64E-03
54	GO:0045309: protein phosphorylated amino acid binding	6.64E-03
55	GO:0004713: protein tyrosine kinase activity	7.40E-03
56	GO:0051539: 4 iron, 4 sulfur cluster binding	7.59E-03
57	GO:0004129: cytochrome-c oxidase activity	8.19E-03
58	GO:0019904: protein domain specific binding	8.19E-03
59	GO:0008559: xenobiotic-transporting ATPase activity	8.19E-03
60	GO:0031072: heat shock protein binding	9.85E-03
61	GO:0004022: alcohol dehydrogenase (NAD) activity	9.85E-03
62	GO:0043531: ADP binding	1.10E-02
63	GO:0008061: chitin binding	1.16E-02
64	GO:0003712: transcription cofactor activity	1.16E-02
65	GO:0005217: intracellular ligand-gated ion channel activity	1.16E-02
66	GO:0004970: ionotropic glutamate receptor activity	1.16E-02
67	GO:0008233: peptidase activity	1.25E-02
68	GO:0008234: cysteine-type peptidase activity	1.29E-02
69	GO:0031418: L-ascorbic acid binding	1.35E-02
70	GO:0004298: threonine-type endopeptidase activity	1.55E-02
71	GO:0015035: protein disulfide oxidoreductase activity	1.70E-02
72	GO:0016491: oxidoreductase activity	1.77E-02
73	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.78E-02
74	GO:0030246: carbohydrate binding	1.89E-02
75	GO:0005507: copper ion binding	2.06E-02
76	GO:0005516: calmodulin binding	2.23E-02
77	GO:0004791: thioredoxin-disulfide reductase activity	2.32E-02
78	GO:0008565: protein transporter activity	2.48E-02
79	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.80E-02
80	GO:0003743: translation initiation factor activity	3.34E-02
81	GO:0005506: iron ion binding	3.37E-02
82	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.59E-02
83	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	3.87E-02
84	GO:0005215: transporter activity	3.99E-02
85	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.01E-02
86	GO:0005096: GTPase activator activity	4.16E-02
87	GO:0004222: metalloendopeptidase activity	4.30E-02
88	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.45E-02
89	GO:0050897: cobalt ion binding	4.45E-02
90	GO:0003746: translation elongation factor activity	4.75E-02
91	GO:0003697: single-stranded DNA binding	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
2	GO:0005783: endoplasmic reticulum	5.95E-16
3	GO:0005788: endoplasmic reticulum lumen	7.39E-15
4	GO:0005886: plasma membrane	6.59E-09
5	GO:0005774: vacuolar membrane	4.84E-07
6	GO:0008541: proteasome regulatory particle, lid subcomplex	2.49E-05
7	GO:0005789: endoplasmic reticulum membrane	2.25E-04
8	GO:0045252: oxoglutarate dehydrogenase complex	2.57E-04
9	GO:0000502: proteasome complex	2.57E-04
10	GO:0016021: integral component of membrane	7.44E-04
11	GO:0030176: integral component of endoplasmic reticulum membrane	9.38E-04
12	GO:0005794: Golgi apparatus	1.38E-03
13	GO:0009898: cytoplasmic side of plasma membrane	1.76E-03
14	GO:0005829: cytosol	2.04E-03
15	GO:0005746: mitochondrial respiratory chain	2.25E-03
16	GO:0048046: apoplast	2.25E-03
17	GO:0008250: oligosaccharyltransferase complex	2.25E-03
18	GO:0009506: plasmodesma	2.49E-03
19	GO:0016020: membrane	2.57E-03
20	GO:0005618: cell wall	2.81E-03
21	GO:0016592: mediator complex	2.98E-03
22	GO:0030173: integral component of Golgi membrane	3.33E-03
23	GO:0016363: nuclear matrix	3.33E-03
24	GO:0045273: respiratory chain complex II	4.56E-03
25	GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)	4.56E-03
26	GO:0005759: mitochondrial matrix	4.95E-03
27	GO:0000326: protein storage vacuole	5.22E-03
28	GO:0019773: proteasome core complex, alpha-subunit complex	5.22E-03
29	GO:0000148: 1,3-beta-D-glucan synthase complex	5.22E-03
30	GO:0030665: clathrin-coated vesicle membrane	6.64E-03
31	GO:0017119: Golgi transport complex	7.40E-03
32	GO:0005750: mitochondrial respiratory chain complex III	1.07E-02
33	GO:0005795: Golgi stack	1.16E-02
34	GO:0005758: mitochondrial intermembrane space	1.35E-02
35	GO:0005773: vacuole	1.46E-02
36	GO:0005839: proteasome core complex	1.55E-02
37	GO:0005741: mitochondrial outer membrane	1.55E-02
38	GO:0009536: plastid	1.57E-02
39	GO:0009505: plant-type cell wall	1.63E-02
40	GO:0015629: actin cytoskeleton	1.76E-02
41	GO:0009504: cell plate	2.43E-02
42	GO:0000325: plant-type vacuole	4.45E-02