co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G45030

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080056: petal vascular tissue pattern formation	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
4	GO:0019500: cyanide catabolic process	0.00E+00
5	GO:0080057: sepal vascular tissue pattern formation	0.00E+00
6	GO:0070476: rRNA (guanine-N7)-methylation	0.00E+00
7	GO:0000478: endonucleolytic cleavage involved in rRNA processing	0.00E+00
8	GO:0071433: cell wall repair	0.00E+00
9	GO:0006457: protein folding	2.41E-12
10	GO:0034976: response to endoplasmic reticulum stress	7.30E-11
11	GO:0046686: response to cadmium ion	9.03E-09
12	GO:0045454: cell redox homeostasis	2.74E-07
13	GO:0009697: salicylic acid biosynthetic process	3.89E-05
14	GO:0006099: tricarboxylic acid cycle	3.96E-05
15	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	8.05E-05
16	GO:0006605: protein targeting	1.37E-04
17	GO:0006102: isocitrate metabolic process	1.37E-04
18	GO:0030968: endoplasmic reticulum unfolded protein response	1.72E-04
19	GO:0051791: medium-chain fatty acid metabolic process	1.77E-04
20	GO:0051938: L-glutamate import	1.77E-04
21	GO:0006047: UDP-N-acetylglucosamine metabolic process	1.77E-04
22	GO:0015760: glucose-6-phosphate transport	1.77E-04
23	GO:0019499: cyanide metabolic process	1.77E-04
24	GO:1990641: response to iron ion starvation	1.77E-04
25	GO:0006422: aspartyl-tRNA aminoacylation	1.77E-04
26	GO:1990022: RNA polymerase III complex localization to nucleus	1.77E-04
27	GO:0044376: RNA polymerase II complex import to nucleus	1.77E-04
28	GO:0019673: GDP-mannose metabolic process	1.77E-04
29	GO:0051775: response to redox state	1.77E-04
30	GO:0042964: thioredoxin reduction	1.77E-04
31	GO:0050691: regulation of defense response to virus by host	1.77E-04
32	GO:0051410: detoxification of nitrogen compound	1.77E-04
33	GO:0006390: transcription from mitochondrial promoter	1.77E-04
34	GO:0019276: UDP-N-acetylgalactosamine metabolic process	1.77E-04
35	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	1.77E-04
36	GO:0009553: embryo sac development	1.82E-04
37	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.01E-04
38	GO:0006101: citrate metabolic process	4.01E-04
39	GO:0015712: hexose phosphate transport	4.01E-04
40	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.01E-04
41	GO:0043091: L-arginine import	4.01E-04
42	GO:0009617: response to bacterium	6.10E-04
43	GO:0045039: protein import into mitochondrial inner membrane	6.55E-04
44	GO:0015714: phosphoenolpyruvate transport	6.55E-04
45	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	6.55E-04
46	GO:0055074: calcium ion homeostasis	6.55E-04
47	GO:0009062: fatty acid catabolic process	6.55E-04
48	GO:0042351: 'de novo' GDP-L-fucose biosynthetic process	6.55E-04
49	GO:0035436: triose phosphate transmembrane transport	6.55E-04
50	GO:0006011: UDP-glucose metabolic process	6.55E-04
51	GO:0080147: root hair cell development	6.94E-04
52	GO:0061077: chaperone-mediated protein folding	8.37E-04
53	GO:0031348: negative regulation of defense response	9.13E-04
54	GO:0072334: UDP-galactose transmembrane transport	9.34E-04
55	GO:0033014: tetrapyrrole biosynthetic process	9.34E-04
56	GO:0051131: chaperone-mediated protein complex assembly	9.34E-04
57	GO:0006515: misfolded or incompletely synthesized protein catabolic process	9.34E-04
58	GO:0009306: protein secretion	1.07E-03
59	GO:0042742: defense response to bacterium	1.15E-03
60	GO:0006979: response to oxidative stress	1.17E-03
61	GO:0048316: seed development	1.17E-03
62	GO:0000460: maturation of 5.8S rRNA	1.24E-03
63	GO:0051205: protein insertion into membrane	1.24E-03
64	GO:0015713: phosphoglycerate transport	1.24E-03
65	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.24E-03
66	GO:0010109: regulation of photosynthesis	1.24E-03
67	GO:0009651: response to salt stress	1.39E-03
68	GO:0045116: protein neddylation	1.57E-03
69	GO:0006097: glyoxylate cycle	1.57E-03
70	GO:0006461: protein complex assembly	1.57E-03
71	GO:0006635: fatty acid beta-oxidation	1.65E-03
72	GO:0000470: maturation of LSU-rRNA	1.94E-03
73	GO:0009643: photosynthetic acclimation	1.94E-03
74	GO:0009408: response to heat	2.25E-03
75	GO:0042372: phylloquinone biosynthetic process	2.32E-03
76	GO:0006458: 'de novo' protein folding	2.32E-03
77	GO:0006955: immune response	2.74E-03
78	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.17E-03
79	GO:0006875: cellular metal ion homeostasis	3.17E-03
80	GO:0050821: protein stabilization	3.17E-03
81	GO:0010043: response to zinc ion	3.57E-03
82	GO:0019430: removal of superoxide radicals	3.63E-03
83	GO:0098656: anion transmembrane transport	4.10E-03
84	GO:0046685: response to arsenic-containing substance	4.10E-03
85	GO:0006783: heme biosynthetic process	4.10E-03
86	GO:0015780: nucleotide-sugar transport	4.10E-03
87	GO:0010205: photoinhibition	4.60E-03
88	GO:0043067: regulation of programmed cell death	4.60E-03
89	GO:0090332: stomatal closure	4.60E-03
90	GO:0009735: response to cytokinin	4.69E-03
91	GO:0009744: response to sucrose	5.03E-03
92	GO:0006535: cysteine biosynthetic process from serine	5.11E-03
93	GO:0009555: pollen development	5.37E-03
94	GO:0006415: translational termination	5.65E-03
95	GO:0006790: sulfur compound metabolic process	6.20E-03
96	GO:0006820: anion transport	6.20E-03
97	GO:0009846: pollen germination	6.32E-03
98	GO:0010588: cotyledon vascular tissue pattern formation	6.78E-03
99	GO:0006364: rRNA processing	6.78E-03
100	GO:0010075: regulation of meristem growth	6.78E-03
101	GO:0006094: gluconeogenesis	6.78E-03
102	GO:0006541: glutamine metabolic process	7.37E-03
103	GO:0002237: response to molecule of bacterial origin	7.37E-03
104	GO:0009934: regulation of meristem structural organization	7.37E-03
105	GO:0046688: response to copper ion	7.98E-03
106	GO:0046854: phosphatidylinositol phosphorylation	7.98E-03
107	GO:0006096: glycolytic process	8.02E-03
108	GO:0000162: tryptophan biosynthetic process	8.61E-03
109	GO:0010187: negative regulation of seed germination	9.26E-03
110	GO:0019344: cysteine biosynthetic process	9.26E-03
111	GO:0009624: response to nematode	9.66E-03
112	GO:0006825: copper ion transport	9.92E-03
113	GO:0003333: amino acid transmembrane transport	1.06E-02
114	GO:0016998: cell wall macromolecule catabolic process	1.06E-02
115	GO:0048364: root development	1.12E-02
116	GO:0007131: reciprocal meiotic recombination	1.13E-02
117	GO:0030433: ubiquitin-dependent ERAD pathway	1.13E-02
118	GO:0007005: mitochondrion organization	1.13E-02
119	GO:0010227: floral organ abscission	1.20E-02
120	GO:0009790: embryo development	1.42E-02
121	GO:0008033: tRNA processing	1.43E-02
122	GO:0010501: RNA secondary structure unwinding	1.43E-02
123	GO:0000413: protein peptidyl-prolyl isomerization	1.43E-02
124	GO:0010118: stomatal movement	1.43E-02
125	GO:0010154: fruit development	1.50E-02
126	GO:0010305: leaf vascular tissue pattern formation	1.50E-02
127	GO:0010197: polar nucleus fusion	1.50E-02
128	GO:0048868: pollen tube development	1.50E-02
129	GO:0009414: response to water deprivation	1.51E-02
130	GO:0009749: response to glucose	1.66E-02
131	GO:0080156: mitochondrial mRNA modification	1.75E-02
132	GO:0030163: protein catabolic process	1.91E-02
133	GO:0010252: auxin homeostasis	2.00E-02
134	GO:0009567: double fertilization forming a zygote and endosperm	2.00E-02
135	GO:0010286: heat acclimation	2.09E-02
136	GO:0016126: sterol biosynthetic process	2.27E-02
137	GO:0009816: defense response to bacterium, incompatible interaction	2.36E-02
138	GO:0009409: response to cold	2.45E-02
139	GO:0009627: systemic acquired resistance	2.45E-02
140	GO:0015995: chlorophyll biosynthetic process	2.55E-02
141	GO:0016311: dephosphorylation	2.64E-02
142	GO:0016049: cell growth	2.64E-02
143	GO:0048481: plant ovule development	2.74E-02
144	GO:0050832: defense response to fungus	2.82E-02
145	GO:0006499: N-terminal protein myristoylation	2.94E-02
146	GO:0048366: leaf development	3.06E-02
147	GO:0080167: response to karrikin	3.22E-02
148	GO:0045087: innate immune response	3.24E-02
149	GO:0042542: response to hydrogen peroxide	3.78E-02
150	GO:0006886: intracellular protein transport	3.97E-02
151	GO:0009644: response to high light intensity	4.11E-02
152	GO:0000154: rRNA modification	4.22E-02
153	GO:0009965: leaf morphogenesis	4.22E-02
154	GO:0006855: drug transmembrane transport	4.33E-02
155	GO:0031347: regulation of defense response	4.45E-02
156	GO:0032259: methylation	4.53E-02
157	GO:0009751: response to salicylic acid	4.66E-02
158	GO:0006486: protein glycosylation	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0004164: diphthine synthase activity	0.00E+00
2	GO:0050220: prostaglandin-E synthase activity	0.00E+00
3	GO:0016435: rRNA (guanine) methyltransferase activity	0.00E+00
4	GO:0004631: phosphomevalonate kinase activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
7	GO:0051082: unfolded protein binding	1.03E-09
8	GO:0003756: protein disulfide isomerase activity	3.91E-08
9	GO:0005460: UDP-glucose transmembrane transporter activity	1.30E-05
10	GO:0005459: UDP-galactose transmembrane transporter activity	3.89E-05
11	GO:0004815: aspartate-tRNA ligase activity	1.77E-04
12	GO:0008446: GDP-mannose 4,6-dehydratase activity	1.77E-04
13	GO:0004325: ferrochelatase activity	1.77E-04
14	GO:0048037: cofactor binding	1.77E-04
15	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	1.77E-04
16	GO:0008909: isochorismate synthase activity	1.77E-04
17	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	1.77E-04
18	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	1.77E-04
19	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.77E-04
20	GO:0008809: carnitine racemase activity	1.77E-04
21	GO:0015152: glucose-6-phosphate transmembrane transporter activity	4.01E-04
22	GO:0004775: succinate-CoA ligase (ADP-forming) activity	4.01E-04
23	GO:0070361: mitochondrial light strand promoter anti-sense binding	4.01E-04
24	GO:0004776: succinate-CoA ligase (GDP-forming) activity	4.01E-04
25	GO:0050017: L-3-cyanoalanine synthase activity	4.01E-04
26	GO:0019781: NEDD8 activating enzyme activity	4.01E-04
27	GO:0043021: ribonucleoprotein complex binding	4.01E-04
28	GO:0003994: aconitate hydratase activity	4.01E-04
29	GO:0005507: copper ion binding	5.75E-04
30	GO:0016531: copper chaperone activity	6.55E-04
31	GO:0004148: dihydrolipoyl dehydrogenase activity	6.55E-04
32	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.55E-04
33	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	6.55E-04
34	GO:0071917: triose-phosphate transmembrane transporter activity	6.55E-04
35	GO:0004049: anthranilate synthase activity	6.55E-04
36	GO:0000030: mannosyltransferase activity	6.55E-04
37	GO:0004298: threonine-type endopeptidase activity	8.37E-04
38	GO:0015181: arginine transmembrane transporter activity	9.34E-04
39	GO:0004449: isocitrate dehydrogenase (NAD+) activity	9.34E-04
40	GO:0016149: translation release factor activity, codon specific	9.34E-04
41	GO:0004165: dodecenoyl-CoA delta-isomerase activity	9.34E-04
42	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	9.34E-04
43	GO:0015189: L-lysine transmembrane transporter activity	9.34E-04
44	GO:0008233: peptidase activity	1.21E-03
45	GO:0005313: L-glutamate transmembrane transporter activity	1.24E-03
46	GO:0016004: phospholipase activator activity	1.24E-03
47	GO:0015120: phosphoglycerate transmembrane transporter activity	1.24E-03
48	GO:0000166: nucleotide binding	1.25E-03
49	GO:0008641: small protein activating enzyme activity	1.57E-03
50	GO:0005452: inorganic anion exchanger activity	1.57E-03
51	GO:0003997: acyl-CoA oxidase activity	1.57E-03
52	GO:0015301: anion:anion antiporter activity	1.57E-03
53	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.32E-03
54	GO:0004656: procollagen-proline 4-dioxygenase activity	2.32E-03
55	GO:0004124: cysteine synthase activity	2.32E-03
56	GO:0030515: snoRNA binding	2.74E-03
57	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.09E-03
58	GO:0015288: porin activity	3.17E-03
59	GO:0050897: cobalt ion binding	3.57E-03
60	GO:0008308: voltage-gated anion channel activity	3.63E-03
61	GO:0005509: calcium ion binding	3.75E-03
62	GO:0003746: translation elongation factor activity	3.91E-03
63	GO:0003747: translation release factor activity	4.10E-03
64	GO:0051539: 4 iron, 4 sulfur cluster binding	4.45E-03
65	GO:0004743: pyruvate kinase activity	4.60E-03
66	GO:0015174: basic amino acid transmembrane transporter activity	4.60E-03
67	GO:0030955: potassium ion binding	4.60E-03
68	GO:0004129: cytochrome-c oxidase activity	5.65E-03
69	GO:0044183: protein binding involved in protein folding	5.65E-03
70	GO:0005524: ATP binding	6.07E-03
71	GO:0051287: NAD binding	6.09E-03
72	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	6.78E-03
73	GO:0005315: inorganic phosphate transmembrane transporter activity	6.78E-03
74	GO:0031072: heat shock protein binding	6.78E-03
75	GO:0004190: aspartic-type endopeptidase activity	7.98E-03
76	GO:0051536: iron-sulfur cluster binding	9.26E-03
77	GO:0031418: L-ascorbic acid binding	9.26E-03
78	GO:0016746: transferase activity, transferring acyl groups	9.95E-03
79	GO:0004176: ATP-dependent peptidase activity	1.06E-02
80	GO:0016779: nucleotidyltransferase activity	1.13E-02
81	GO:0005525: GTP binding	1.14E-02
82	GO:0010181: FMN binding	1.58E-02
83	GO:0004791: thioredoxin-disulfide reductase activity	1.58E-02
84	GO:0016853: isomerase activity	1.58E-02
85	GO:0015297: antiporter activity	1.60E-02
86	GO:0008168: methyltransferase activity	2.50E-02
87	GO:0004004: ATP-dependent RNA helicase activity	2.55E-02
88	GO:0000287: magnesium ion binding	2.55E-02
89	GO:0008236: serine-type peptidase activity	2.64E-02
90	GO:0003729: mRNA binding	2.82E-02
91	GO:0016740: transferase activity	2.82E-02
92	GO:0015238: drug transmembrane transporter activity	2.84E-02
93	GO:0030246: carbohydrate binding	3.19E-02
94	GO:0003697: single-stranded DNA binding	3.24E-02
95	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.24E-02
96	GO:0050661: NADP binding	3.56E-02
97	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.33E-02
98	GO:0003924: GTPase activity	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005832: chaperonin-containing T-complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0005788: endoplasmic reticulum lumen	4.04E-14
5	GO:0005783: endoplasmic reticulum	8.40E-13
6	GO:0005739: mitochondrion	9.94E-09
7	GO:0005774: vacuolar membrane	8.57E-07
8	GO:0005759: mitochondrial matrix	4.58E-05
9	GO:0019773: proteasome core complex, alpha-subunit complex	1.72E-04
10	GO:0045252: oxoglutarate dehydrogenase complex	1.77E-04
11	GO:0034245: mitochondrial DNA-directed RNA polymerase complex	1.77E-04
12	GO:0005829: cytosol	3.33E-04
13	GO:0070545: PeBoW complex	4.01E-04
14	GO:0030176: integral component of endoplasmic reticulum membrane	5.64E-04
15	GO:0005839: proteasome core complex	8.37E-04
16	GO:0009507: chloroplast	9.95E-04
17	GO:0005834: heterotrimeric G-protein complex	1.22E-03
18	GO:0030660: Golgi-associated vesicle membrane	1.24E-03
19	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.24E-03
20	GO:0005773: vacuole	1.47E-03
21	GO:0005746: mitochondrial respiratory chain	1.57E-03
22	GO:0031428: box C/D snoRNP complex	1.94E-03
23	GO:0005762: mitochondrial large ribosomal subunit	2.32E-03
24	GO:0030173: integral component of Golgi membrane	2.32E-03
25	GO:0030687: preribosome, large subunit precursor	2.74E-03
26	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.17E-03
27	GO:0000326: protein storage vacuole	3.63E-03
28	GO:0046930: pore complex	3.63E-03
29	GO:0005740: mitochondrial envelope	5.11E-03
30	GO:0005765: lysosomal membrane	5.65E-03
31	GO:0009536: plastid	6.17E-03
32	GO:0032040: small-subunit processome	6.20E-03
33	GO:0031969: chloroplast membrane	6.49E-03
34	GO:0000502: proteasome complex	6.78E-03
35	GO:0005747: mitochondrial respiratory chain complex I	8.28E-03
36	GO:0043234: protein complex	8.61E-03
37	GO:0005789: endoplasmic reticulum membrane	9.05E-03
38	GO:0005758: mitochondrial intermembrane space	9.26E-03
39	GO:0005741: mitochondrial outer membrane	1.06E-02
40	GO:0005623: cell	1.24E-02
41	GO:0009506: plasmodesma	1.48E-02
42	GO:0005618: cell wall	1.70E-02
43	GO:0016592: mediator complex	1.83E-02
44	GO:0009505: plant-type cell wall	2.19E-02
45	GO:0005777: peroxisome	2.62E-02
46	GO:0005886: plasma membrane	2.72E-02
47	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.85E-02
48	GO:0015934: large ribosomal subunit	3.04E-02
49	GO:0005730: nucleolus	3.40E-02
50	GO:0048046: apoplast	3.93E-02