co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G44740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
2	GO:1901698: response to nitrogen compound	0.00E+00
3	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
4	GO:0042493: response to drug	0.00E+00
5	GO:1905499: trichome papilla formation	0.00E+00
6	GO:0042335: cuticle development	1.05E-05
7	GO:0006633: fatty acid biosynthetic process	1.66E-05
8	GO:0010583: response to cyclopentenone	2.22E-05
9	GO:0000038: very long-chain fatty acid metabolic process	2.65E-05
10	GO:0006833: water transport	7.16E-05
11	GO:0010444: guard mother cell differentiation	1.99E-04
12	GO:0034220: ion transmembrane transport	2.07E-04
13	GO:0046520: sphingoid biosynthetic process	2.65E-04
14	GO:0010442: guard cell morphogenesis	2.65E-04
15	GO:0043007: maintenance of rDNA	2.65E-04
16	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	2.65E-04
17	GO:0060627: regulation of vesicle-mediated transport	2.65E-04
18	GO:0071555: cell wall organization	2.99E-04
19	GO:0009932: cell tip growth	3.10E-04
20	GO:0000902: cell morphogenesis	3.74E-04
21	GO:0007267: cell-cell signaling	4.29E-04
22	GO:0043069: negative regulation of programmed cell death	5.20E-04
23	GO:0006695: cholesterol biosynthetic process	5.83E-04
24	GO:0060919: auxin influx	5.83E-04
25	GO:0031648: protein destabilization	5.83E-04
26	GO:0071258: cellular response to gravity	5.83E-04
27	GO:2000123: positive regulation of stomatal complex development	5.83E-04
28	GO:0052541: plant-type cell wall cellulose metabolic process	5.83E-04
29	GO:0010411: xyloglucan metabolic process	6.13E-04
30	GO:0046168: glycerol-3-phosphate catabolic process	9.47E-04
31	GO:0015840: urea transport	9.47E-04
32	GO:0071705: nitrogen compound transport	9.47E-04
33	GO:1902448: positive regulation of shade avoidance	9.47E-04
34	GO:0010025: wax biosynthetic process	1.08E-03
35	GO:0006631: fatty acid metabolic process	1.16E-03
36	GO:0016042: lipid catabolic process	1.20E-03
37	GO:0080170: hydrogen peroxide transmembrane transport	1.35E-03
38	GO:0006072: glycerol-3-phosphate metabolic process	1.35E-03
39	GO:0009650: UV protection	1.35E-03
40	GO:0010731: protein glutathionylation	1.35E-03
41	GO:0006424: glutamyl-tRNA aminoacylation	1.35E-03
42	GO:0050482: arachidonic acid secretion	1.35E-03
43	GO:0042546: cell wall biogenesis	1.35E-03
44	GO:0009413: response to flooding	1.35E-03
45	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.72E-03
46	GO:0006183: GTP biosynthetic process	1.81E-03
47	GO:0030104: water homeostasis	1.81E-03
48	GO:2000038: regulation of stomatal complex development	1.81E-03
49	GO:0071249: cellular response to nitrate	1.81E-03
50	GO:0019722: calcium-mediated signaling	1.87E-03
51	GO:0009826: unidimensional cell growth	2.03E-03
52	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.03E-03
53	GO:0000271: polysaccharide biosynthetic process	2.19E-03
54	GO:0010375: stomatal complex patterning	2.31E-03
55	GO:0032543: mitochondrial translation	2.31E-03
56	GO:0006665: sphingolipid metabolic process	2.31E-03
57	GO:0045489: pectin biosynthetic process	2.36E-03
58	GO:0009972: cytidine deamination	2.85E-03
59	GO:0042372: phylloquinone biosynthetic process	3.43E-03
60	GO:0009612: response to mechanical stimulus	3.43E-03
61	GO:0006694: steroid biosynthetic process	3.43E-03
62	GO:0048280: vesicle fusion with Golgi apparatus	3.43E-03
63	GO:0009554: megasporogenesis	3.43E-03
64	GO:0009828: plant-type cell wall loosening	3.51E-03
65	GO:0045454: cell redox homeostasis	3.92E-03
66	GO:0030497: fatty acid elongation	4.04E-03
67	GO:0009645: response to low light intensity stimulus	4.04E-03
68	GO:0006869: lipid transport	4.51E-03
69	GO:0006644: phospholipid metabolic process	4.69E-03
70	GO:0007155: cell adhesion	4.69E-03
71	GO:0032544: plastid translation	5.37E-03
72	GO:0009808: lignin metabolic process	5.37E-03
73	GO:0045337: farnesyl diphosphate biosynthetic process	6.09E-03
74	GO:0051865: protein autoubiquitination	6.09E-03
75	GO:0033384: geranyl diphosphate biosynthetic process	6.09E-03
76	GO:0042761: very long-chain fatty acid biosynthetic process	6.83E-03
77	GO:0016051: carbohydrate biosynthetic process	6.93E-03
78	GO:0007166: cell surface receptor signaling pathway	6.97E-03
79	GO:0006896: Golgi to vacuole transport	7.61E-03
80	GO:0009870: defense response signaling pathway, resistance gene-dependent	7.61E-03
81	GO:0006535: cysteine biosynthetic process from serine	7.61E-03
82	GO:0048829: root cap development	7.61E-03
83	GO:0006949: syncytium formation	7.61E-03
84	GO:0005975: carbohydrate metabolic process	8.20E-03
85	GO:0006415: translational termination	8.42E-03
86	GO:0048765: root hair cell differentiation	8.42E-03
87	GO:0030148: sphingolipid biosynthetic process	8.42E-03
88	GO:0010015: root morphogenesis	8.42E-03
89	GO:0015706: nitrate transport	9.26E-03
90	GO:0008643: carbohydrate transport	9.68E-03
91	GO:0050826: response to freezing	1.01E-02
92	GO:0009725: response to hormone	1.01E-02
93	GO:0010207: photosystem II assembly	1.10E-02
94	GO:0009664: plant-type cell wall organization	1.12E-02
95	GO:0042538: hyperosmotic salinity response	1.12E-02
96	GO:0009860: pollen tube growth	1.13E-02
97	GO:0010167: response to nitrate	1.20E-02
98	GO:0010030: positive regulation of seed germination	1.20E-02
99	GO:0010053: root epidermal cell differentiation	1.20E-02
100	GO:0009969: xyloglucan biosynthetic process	1.20E-02
101	GO:0006071: glycerol metabolic process	1.29E-02
102	GO:0019762: glucosinolate catabolic process	1.29E-02
103	GO:0009416: response to light stimulus	1.29E-02
104	GO:0080167: response to karrikin	1.35E-02
105	GO:0005992: trehalose biosynthetic process	1.39E-02
106	GO:0019344: cysteine biosynthetic process	1.39E-02
107	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.41E-02
108	GO:0009733: response to auxin	1.44E-02
109	GO:0010026: trichome differentiation	1.49E-02
110	GO:0007017: microtubule-based process	1.49E-02
111	GO:0003333: amino acid transmembrane transport	1.59E-02
112	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.70E-02
113	GO:0031348: negative regulation of defense response	1.70E-02
114	GO:0009411: response to UV	1.81E-02
115	GO:0055085: transmembrane transport	1.84E-02
116	GO:0010091: trichome branching	1.92E-02
117	GO:0042127: regulation of cell proliferation	1.92E-02
118	GO:0055114: oxidation-reduction process	2.00E-02
119	GO:0042147: retrograde transport, endosome to Golgi	2.03E-02
120	GO:0070417: cellular response to cold	2.03E-02
121	GO:0000226: microtubule cytoskeleton organization	2.15E-02
122	GO:0000413: protein peptidyl-prolyl isomerization	2.15E-02
123	GO:0042631: cellular response to water deprivation	2.15E-02
124	GO:0010305: leaf vascular tissue pattern formation	2.26E-02
125	GO:0006810: transport	2.28E-02
126	GO:0006623: protein targeting to vacuole	2.51E-02
127	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	2.63E-02
128	GO:0071554: cell wall organization or biogenesis	2.63E-02
129	GO:0006891: intra-Golgi vesicle-mediated transport	2.63E-02
130	GO:0016132: brassinosteroid biosynthetic process	2.63E-02
131	GO:0007264: small GTPase mediated signal transduction	2.76E-02
132	GO:0040008: regulation of growth	2.85E-02
133	GO:1901657: glycosyl compound metabolic process	2.88E-02
134	GO:0045490: pectin catabolic process	2.98E-02
135	GO:0009567: double fertilization forming a zygote and endosperm	3.02E-02
136	GO:0051607: defense response to virus	3.28E-02
137	GO:0000910: cytokinesis	3.28E-02
138	GO:0009739: response to gibberellin	3.33E-02
139	GO:0009734: auxin-activated signaling pathway	3.38E-02
140	GO:0010027: thylakoid membrane organization	3.42E-02
141	GO:0016126: sterol biosynthetic process	3.42E-02
142	GO:0009414: response to water deprivation	3.54E-02
143	GO:0009627: systemic acquired resistance	3.70E-02
144	GO:0042128: nitrate assimilation	3.70E-02
145	GO:0006888: ER to Golgi vesicle-mediated transport	3.84E-02
146	GO:0016311: dephosphorylation	3.98E-02
147	GO:0009735: response to cytokinin	4.03E-02
148	GO:0010311: lateral root formation	4.28E-02
149	GO:0000160: phosphorelay signal transduction system	4.28E-02
150	GO:0009813: flavonoid biosynthetic process	4.28E-02
151	GO:0009407: toxin catabolic process	4.43E-02
152	GO:0009834: plant-type secondary cell wall biogenesis	4.43E-02
153	GO:0010119: regulation of stomatal movement	4.58E-02
154	GO:0007568: aging	4.58E-02
155	GO:0009658: chloroplast organization	4.60E-02
156	GO:0042254: ribosome biogenesis	4.68E-02
157	GO:0006865: amino acid transport	4.73E-02
158	GO:0045087: innate immune response	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0080132: fatty acid alpha-hydroxylase activity	0.00E+00
2	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
4	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
5	GO:0050614: delta24-sterol reductase activity	0.00E+00
6	GO:0052689: carboxylic ester hydrolase activity	1.93E-05
7	GO:0015250: water channel activity	4.08E-05
8	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.16E-05
9	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.16E-05
10	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.16E-05
11	GO:0009922: fatty acid elongase activity	7.56E-05
12	GO:0052631: sphingolipid delta-8 desaturase activity	2.65E-04
13	GO:0009374: biotin binding	2.65E-04
14	GO:0015200: methylammonium transmembrane transporter activity	2.65E-04
15	GO:0000170: sphingosine hydroxylase activity	2.65E-04
16	GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity	2.65E-04
17	GO:0030794: (S)-coclaurine-N-methyltransferase activity	2.65E-04
18	GO:0004560: alpha-L-fucosidase activity	2.65E-04
19	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	2.65E-04
20	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.07E-04
21	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.29E-04
22	GO:0016788: hydrolase activity, acting on ester bonds	4.49E-04
23	GO:0042284: sphingolipid delta-4 desaturase activity	5.83E-04
24	GO:0003938: IMP dehydrogenase activity	5.83E-04
25	GO:0016798: hydrolase activity, acting on glycosyl bonds	6.13E-04
26	GO:0008378: galactosyltransferase activity	6.85E-04
27	GO:0070330: aromatase activity	9.47E-04
28	GO:0004148: dihydrolipoyl dehydrogenase activity	9.47E-04
29	GO:0005504: fatty acid binding	9.47E-04
30	GO:0045174: glutathione dehydrogenase (ascorbate) activity	9.47E-04
31	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	9.47E-04
32	GO:0004857: enzyme inhibitor activity	1.20E-03
33	GO:0016149: translation release factor activity, codon specific	1.35E-03
34	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	1.35E-03
35	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	1.58E-03
36	GO:0010328: auxin influx transmembrane transporter activity	1.81E-03
37	GO:0004506: squalene monooxygenase activity	1.81E-03
38	GO:0045430: chalcone isomerase activity	1.81E-03
39	GO:0015204: urea transmembrane transporter activity	1.81E-03
40	GO:0008289: lipid binding	2.25E-03
41	GO:0004623: phospholipase A2 activity	2.31E-03
42	GO:0018685: alkane 1-monooxygenase activity	2.31E-03
43	GO:0003989: acetyl-CoA carboxylase activity	2.31E-03
44	GO:0004650: polygalacturonase activity	2.61E-03
45	GO:0016208: AMP binding	2.85E-03
46	GO:0008200: ion channel inhibitor activity	2.85E-03
47	GO:0008519: ammonium transmembrane transporter activity	2.85E-03
48	GO:0004126: cytidine deaminase activity	3.43E-03
49	GO:0051753: mannan synthase activity	3.43E-03
50	GO:0004124: cysteine synthase activity	3.43E-03
51	GO:0051920: peroxiredoxin activity	3.43E-03
52	GO:0005200: structural constituent of cytoskeleton	3.73E-03
53	GO:0016758: transferase activity, transferring hexosyl groups	3.77E-03
54	GO:0016209: antioxidant activity	4.69E-03
55	GO:0102483: scopolin beta-glucosidase activity	4.93E-03
56	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	5.38E-03
57	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.62E-03
58	GO:0004337: geranyltranstransferase activity	6.09E-03
59	GO:0008889: glycerophosphodiester phosphodiesterase activity	6.09E-03
60	GO:0003747: translation release factor activity	6.09E-03
61	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	6.09E-03
62	GO:0005507: copper ion binding	6.42E-03
63	GO:0008422: beta-glucosidase activity	7.57E-03
64	GO:0004805: trehalose-phosphatase activity	7.61E-03
65	GO:0008794: arsenate reductase (glutaredoxin) activity	8.42E-03
66	GO:0004161: dimethylallyltranstransferase activity	8.42E-03
67	GO:0004364: glutathione transferase activity	8.58E-03
68	GO:0015293: symporter activity	1.01E-02
69	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.04E-02
70	GO:0051119: sugar transmembrane transporter activity	1.20E-02
71	GO:0005528: FK506 binding	1.39E-02
72	GO:0003824: catalytic activity	1.39E-02
73	GO:0030570: pectate lyase activity	1.81E-02
74	GO:0016491: oxidoreductase activity	1.90E-02
75	GO:0008514: organic anion transmembrane transporter activity	1.92E-02
76	GO:0046983: protein dimerization activity	1.94E-02
77	GO:0019843: rRNA binding	2.16E-02
78	GO:0003924: GTPase activity	2.21E-02
79	GO:0009055: electron carrier activity	2.41E-02
80	GO:0019901: protein kinase binding	2.51E-02
81	GO:0000156: phosphorelay response regulator activity	2.88E-02
82	GO:0016597: amino acid binding	3.28E-02
83	GO:0016413: O-acetyltransferase activity	3.28E-02
84	GO:0005506: iron ion binding	3.58E-02
85	GO:0005215: transporter activity	4.23E-02
86	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	4.43E-02
87	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.58E-02
88	GO:0004601: peroxidase activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	5.96E-16
2	GO:0005576: extracellular region	3.39E-13
3	GO:0009505: plant-type cell wall	5.77E-13
4	GO:0046658: anchored component of plasma membrane	4.15E-11
5	GO:0048046: apoplast	3.59E-10
6	GO:0005618: cell wall	2.38E-07
7	GO:0005886: plasma membrane	3.52E-07
8	GO:0042807: central vacuole	1.99E-04
9	GO:0043674: columella	2.65E-04
10	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	2.65E-04
11	GO:0009923: fatty acid elongase complex	2.65E-04
12	GO:0005773: vacuole	3.69E-04
13	GO:0045298: tubulin complex	3.74E-04
14	GO:0016020: membrane	4.01E-04
15	GO:0009506: plasmodesma	5.34E-04
16	GO:0005794: Golgi apparatus	7.21E-04
17	GO:0009509: chromoplast	9.47E-04
18	GO:0009317: acetyl-CoA carboxylase complex	9.47E-04
19	GO:0009331: glycerol-3-phosphate dehydrogenase complex	1.35E-03
20	GO:0005887: integral component of plasma membrane	2.16E-03
21	GO:0005789: endoplasmic reticulum membrane	2.71E-03
22	GO:0009543: chloroplast thylakoid lumen	3.90E-03
23	GO:0009533: chloroplast stromal thylakoid	4.04E-03
24	GO:0009570: chloroplast stroma	4.60E-03
25	GO:0012507: ER to Golgi transport vesicle membrane	4.69E-03
26	GO:0009941: chloroplast envelope	4.82E-03
27	GO:0000326: protein storage vacuole	5.37E-03
28	GO:0005783: endoplasmic reticulum	5.45E-03
29	GO:0005774: vacuolar membrane	5.99E-03
30	GO:0031977: thylakoid lumen	8.24E-03
31	GO:0031410: cytoplasmic vesicle	1.70E-02
32	GO:0000139: Golgi membrane	1.99E-02
33	GO:0016021: integral component of membrane	2.44E-02
34	GO:0009504: cell plate	2.51E-02
35	GO:0009705: plant-type vacuole membrane	2.98E-02
36	GO:0005778: peroxisomal membrane	3.15E-02
37	GO:0000151: ubiquitin ligase complex	4.13E-02
38	GO:0009535: chloroplast thylakoid membrane	4.58E-02