GO Enrichment Analysis of Co-expressed Genes with
AT2G43940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 2 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 3 | GO:0031990: mRNA export from nucleus in response to heat stress | 0.00E+00 |
| 4 | GO:0006102: isocitrate metabolic process | 7.39E-06 |
| 5 | GO:0006099: tricarboxylic acid cycle | 1.29E-05 |
| 6 | GO:0051938: L-glutamate import | 2.76E-05 |
| 7 | GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex | 2.76E-05 |
| 8 | GO:1900424: regulation of defense response to bacterium | 2.76E-05 |
| 9 | GO:0045948: positive regulation of translational initiation | 7.01E-05 |
| 10 | GO:0007051: spindle organization | 7.01E-05 |
| 11 | GO:0006101: citrate metabolic process | 7.01E-05 |
| 12 | GO:0043091: L-arginine import | 7.01E-05 |
| 13 | GO:0051262: protein tetramerization | 7.01E-05 |
| 14 | GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 1.23E-04 |
| 15 | GO:0019252: starch biosynthetic process | 1.36E-04 |
| 16 | GO:0072334: UDP-galactose transmembrane transport | 1.83E-04 |
| 17 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.83E-04 |
| 18 | GO:1902584: positive regulation of response to water deprivation | 2.48E-04 |
| 19 | GO:0010222: stem vascular tissue pattern formation | 2.48E-04 |
| 20 | GO:0006405: RNA export from nucleus | 3.18E-04 |
| 21 | GO:0006465: signal peptide processing | 3.18E-04 |
| 22 | GO:0045927: positive regulation of growth | 3.18E-04 |
| 23 | GO:0006564: L-serine biosynthetic process | 3.18E-04 |
| 24 | GO:0006097: glyoxylate cycle | 3.18E-04 |
| 25 | GO:0045454: cell redox homeostasis | 3.63E-04 |
| 26 | GO:0000060: protein import into nucleus, translocation | 3.92E-04 |
| 27 | GO:0006014: D-ribose metabolic process | 3.92E-04 |
| 28 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 3.92E-04 |
| 29 | GO:0034389: lipid particle organization | 4.69E-04 |
| 30 | GO:0098655: cation transmembrane transport | 4.69E-04 |
| 31 | GO:0015977: carbon fixation | 4.69E-04 |
| 32 | GO:0080186: developmental vegetative growth | 5.49E-04 |
| 33 | GO:0000082: G1/S transition of mitotic cell cycle | 5.49E-04 |
| 34 | GO:0005978: glycogen biosynthetic process | 6.32E-04 |
| 35 | GO:0046686: response to cadmium ion | 7.04E-04 |
| 36 | GO:0006367: transcription initiation from RNA polymerase II promoter | 7.18E-04 |
| 37 | GO:0046916: cellular transition metal ion homeostasis | 8.07E-04 |
| 38 | GO:0071577: zinc II ion transmembrane transport | 8.99E-04 |
| 39 | GO:0009299: mRNA transcription | 9.92E-04 |
| 40 | GO:0090351: seedling development | 1.50E-03 |
| 41 | GO:0006289: nucleotide-excision repair | 1.73E-03 |
| 42 | GO:0006487: protein N-linked glycosylation | 1.73E-03 |
| 43 | GO:0006825: copper ion transport | 1.85E-03 |
| 44 | GO:0006366: transcription from RNA polymerase II promoter | 1.97E-03 |
| 45 | GO:0003333: amino acid transmembrane transport | 1.97E-03 |
| 46 | GO:0051028: mRNA transport | 2.48E-03 |
| 47 | GO:0034220: ion transmembrane transport | 2.61E-03 |
| 48 | GO:0009409: response to cold | 3.41E-03 |
| 49 | GO:0010286: heat acclimation | 3.75E-03 |
| 50 | GO:0001666: response to hypoxia | 4.06E-03 |
| 51 | GO:0008219: cell death | 4.87E-03 |
| 52 | GO:0009407: toxin catabolic process | 5.21E-03 |
| 53 | GO:0010043: response to zinc ion | 5.38E-03 |
| 54 | GO:0030001: metal ion transport | 6.27E-03 |
| 55 | GO:0006812: cation transport | 7.99E-03 |
| 56 | GO:0051603: proteolysis involved in cellular protein catabolic process | 8.60E-03 |
| 57 | GO:0048316: seed development | 9.65E-03 |
| 58 | GO:0006511: ubiquitin-dependent protein catabolic process | 9.68E-03 |
| 59 | GO:0042742: defense response to bacterium | 1.45E-02 |
| 60 | GO:0006979: response to oxidative stress | 1.46E-02 |
| 61 | GO:0016036: cellular response to phosphate starvation | 1.51E-02 |
| 62 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.71E-02 |
| 63 | GO:0010468: regulation of gene expression | 1.79E-02 |
| 64 | GO:0055114: oxidation-reduction process | 2.08E-02 |
| 65 | GO:0048366: leaf development | 2.42E-02 |
| 66 | GO:0080167: response to karrikin | 2.51E-02 |
| 67 | GO:0015979: photosynthesis | 2.76E-02 |
| 68 | GO:0009873: ethylene-activated signaling pathway | 3.98E-02 |
| 69 | GO:0009651: response to salt stress | 4.84E-02 |
| 70 | GO:0009555: pollen development | 4.99E-02 |
| 71 | GO:0009416: response to light stimulus | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 2 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 3 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 2.76E-05 |
| 4 | GO:0004617: phosphoglycerate dehydrogenase activity | 7.01E-05 |
| 5 | GO:0003994: aconitate hydratase activity | 7.01E-05 |
| 6 | GO:0008964: phosphoenolpyruvate carboxylase activity | 1.23E-04 |
| 7 | GO:0015181: arginine transmembrane transporter activity | 1.83E-04 |
| 8 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 1.83E-04 |
| 9 | GO:0015189: L-lysine transmembrane transporter activity | 1.83E-04 |
| 10 | GO:0005313: L-glutamate transmembrane transporter activity | 2.48E-04 |
| 11 | GO:0070628: proteasome binding | 2.48E-04 |
| 12 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 2.48E-04 |
| 13 | GO:0005459: UDP-galactose transmembrane transporter activity | 3.18E-04 |
| 14 | GO:0005452: inorganic anion exchanger activity | 3.18E-04 |
| 15 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.18E-04 |
| 16 | GO:0000104: succinate dehydrogenase activity | 3.18E-04 |
| 17 | GO:0015301: anion:anion antiporter activity | 3.18E-04 |
| 18 | GO:0031369: translation initiation factor binding | 3.92E-04 |
| 19 | GO:0031593: polyubiquitin binding | 3.92E-04 |
| 20 | GO:0004747: ribokinase activity | 4.69E-04 |
| 21 | GO:0004602: glutathione peroxidase activity | 4.69E-04 |
| 22 | GO:0051920: peroxiredoxin activity | 4.69E-04 |
| 23 | GO:0043295: glutathione binding | 5.49E-04 |
| 24 | GO:0008865: fructokinase activity | 6.32E-04 |
| 25 | GO:0016209: antioxidant activity | 6.32E-04 |
| 26 | GO:0046914: transition metal ion binding | 7.18E-04 |
| 27 | GO:0015174: basic amino acid transmembrane transporter activity | 8.99E-04 |
| 28 | GO:0009982: pseudouridine synthase activity | 1.29E-03 |
| 29 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.29E-03 |
| 30 | GO:0004725: protein tyrosine phosphatase activity | 1.62E-03 |
| 31 | GO:0043130: ubiquitin binding | 1.73E-03 |
| 32 | GO:0005385: zinc ion transmembrane transporter activity | 1.73E-03 |
| 33 | GO:0008324: cation transmembrane transporter activity | 1.85E-03 |
| 34 | GO:0004298: threonine-type endopeptidase activity | 1.97E-03 |
| 35 | GO:0003727: single-stranded RNA binding | 2.35E-03 |
| 36 | GO:0008233: peptidase activity | 2.70E-03 |
| 37 | GO:0008536: Ran GTPase binding | 2.74E-03 |
| 38 | GO:0046873: metal ion transmembrane transporter activity | 2.74E-03 |
| 39 | GO:0003684: damaged DNA binding | 3.60E-03 |
| 40 | GO:0016597: amino acid binding | 3.90E-03 |
| 41 | GO:0015250: water channel activity | 4.06E-03 |
| 42 | GO:0004721: phosphoprotein phosphatase activity | 4.54E-03 |
| 43 | GO:0005096: GTPase activator activity | 5.04E-03 |
| 44 | GO:0003697: single-stranded DNA binding | 5.73E-03 |
| 45 | GO:0051539: 4 iron, 4 sulfur cluster binding | 6.27E-03 |
| 46 | GO:0004364: glutathione transferase activity | 6.64E-03 |
| 47 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.20E-03 |
| 48 | GO:0051287: NAD binding | 7.79E-03 |
| 49 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 8.40E-03 |
| 50 | GO:0015171: amino acid transmembrane transporter activity | 9.01E-03 |
| 51 | GO:0005507: copper ion binding | 1.01E-02 |
| 52 | GO:0015035: protein disulfide oxidoreductase activity | 1.10E-02 |
| 53 | GO:0005515: protein binding | 1.27E-02 |
| 54 | GO:0046982: protein heterodimerization activity | 2.13E-02 |
| 55 | GO:0004601: peroxidase activity | 2.16E-02 |
| 56 | GO:0009055: electron carrier activity | 3.49E-02 |
| 57 | GO:0000166: nucleotide binding | 4.99E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005787: signal peptidase complex | 2.76E-05 |
| 2 | GO:0005829: cytosol | 6.75E-05 |
| 3 | GO:0005737: cytoplasm | 1.88E-04 |
| 4 | GO:0008250: oligosaccharyltransferase complex | 3.18E-04 |
| 5 | GO:0030173: integral component of Golgi membrane | 4.69E-04 |
| 6 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 6.32E-04 |
| 7 | GO:0005811: lipid particle | 7.18E-04 |
| 8 | GO:0031090: organelle membrane | 8.07E-04 |
| 9 | GO:0005665: DNA-directed RNA polymerase II, core complex | 1.19E-03 |
| 10 | GO:0005886: plasma membrane | 1.45E-03 |
| 11 | GO:0030176: integral component of endoplasmic reticulum membrane | 1.50E-03 |
| 12 | GO:0005839: proteasome core complex | 1.97E-03 |
| 13 | GO:0000785: chromatin | 3.31E-03 |
| 14 | GO:0005778: peroxisomal membrane | 3.75E-03 |
| 15 | GO:0000932: P-body | 4.06E-03 |
| 16 | GO:0005643: nuclear pore | 4.87E-03 |
| 17 | GO:0005783: endoplasmic reticulum | 6.77E-03 |
| 18 | GO:0000502: proteasome complex | 8.40E-03 |
| 19 | GO:0016021: integral component of membrane | 8.82E-03 |
| 20 | GO:0048046: apoplast | 1.19E-02 |
| 21 | GO:0005623: cell | 1.28E-02 |
| 22 | GO:0005773: vacuole | 1.93E-02 |
| 23 | GO:0005789: endoplasmic reticulum membrane | 2.21E-02 |
| 24 | GO:0031969: chloroplast membrane | 2.51E-02 |
| 25 | GO:0009570: chloroplast stroma | 2.51E-02 |
| 26 | GO:0009507: chloroplast | 3.45E-02 |
| 27 | GO:0005887: integral component of plasma membrane | 4.13E-02 |
| 28 | GO:0005774: vacuolar membrane | 4.99E-02 |