GO Enrichment Analysis of Co-expressed Genes with
AT2G43630
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 3 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0042407: cristae formation | 0.00E+00 |
| 5 | GO:0006426: glycyl-tRNA aminoacylation | 2.19E-05 |
| 6 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.19E-05 |
| 7 | GO:1900871: chloroplast mRNA modification | 5.64E-05 |
| 8 | GO:0008616: queuosine biosynthetic process | 5.64E-05 |
| 9 | GO:0006423: cysteinyl-tRNA aminoacylation | 5.64E-05 |
| 10 | GO:0009658: chloroplast organization | 1.43E-04 |
| 11 | GO:0051085: chaperone mediated protein folding requiring cofactor | 1.49E-04 |
| 12 | GO:0010239: chloroplast mRNA processing | 1.49E-04 |
| 13 | GO:0015995: chlorophyll biosynthetic process | 1.89E-04 |
| 14 | GO:0071483: cellular response to blue light | 2.04E-04 |
| 15 | GO:0016123: xanthophyll biosynthetic process | 2.62E-04 |
| 16 | GO:0016120: carotene biosynthetic process | 2.62E-04 |
| 17 | GO:0017148: negative regulation of translation | 3.89E-04 |
| 18 | GO:0042026: protein refolding | 3.89E-04 |
| 19 | GO:1901259: chloroplast rRNA processing | 3.89E-04 |
| 20 | GO:0006401: RNA catabolic process | 4.56E-04 |
| 21 | GO:0045995: regulation of embryonic development | 4.56E-04 |
| 22 | GO:0006402: mRNA catabolic process | 5.25E-04 |
| 23 | GO:0052543: callose deposition in cell wall | 5.25E-04 |
| 24 | GO:0006353: DNA-templated transcription, termination | 5.25E-04 |
| 25 | GO:0071482: cellular response to light stimulus | 5.98E-04 |
| 26 | GO:0009657: plastid organization | 5.98E-04 |
| 27 | GO:0043067: regulation of programmed cell death | 7.48E-04 |
| 28 | GO:0031425: chloroplast RNA processing | 7.48E-04 |
| 29 | GO:0006352: DNA-templated transcription, initiation | 9.07E-04 |
| 30 | GO:0045037: protein import into chloroplast stroma | 9.89E-04 |
| 31 | GO:0090351: seedling development | 1.25E-03 |
| 32 | GO:0006418: tRNA aminoacylation for protein translation | 1.53E-03 |
| 33 | GO:0007005: mitochondrion organization | 1.73E-03 |
| 34 | GO:0008033: tRNA processing | 2.15E-03 |
| 35 | GO:0010197: polar nucleus fusion | 2.26E-03 |
| 36 | GO:0009741: response to brassinosteroid | 2.26E-03 |
| 37 | GO:0015979: photosynthesis | 2.35E-03 |
| 38 | GO:0006397: mRNA processing | 3.16E-03 |
| 39 | GO:0009627: systemic acquired resistance | 3.60E-03 |
| 40 | GO:0048481: plant ovule development | 4.00E-03 |
| 41 | GO:0008219: cell death | 4.00E-03 |
| 42 | GO:0009793: embryo development ending in seed dormancy | 4.63E-03 |
| 43 | GO:0045087: innate immune response | 4.70E-03 |
| 44 | GO:0006364: rRNA processing | 6.88E-03 |
| 45 | GO:0006457: protein folding | 6.90E-03 |
| 46 | GO:0009790: embryo development | 1.15E-02 |
| 47 | GO:0006633: fatty acid biosynthetic process | 1.21E-02 |
| 48 | GO:0016036: cellular response to phosphate starvation | 1.23E-02 |
| 49 | GO:0006413: translational initiation | 1.23E-02 |
| 50 | GO:0009451: RNA modification | 1.31E-02 |
| 51 | GO:0048366: leaf development | 1.98E-02 |
| 52 | GO:0045454: cell redox homeostasis | 2.33E-02 |
| 53 | GO:0008152: metabolic process | 2.90E-02 |
| 54 | GO:0009735: response to cytokinin | 3.82E-02 |
| 55 | GO:0045893: positive regulation of transcription, DNA-templated | 4.49E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 2 | GO:0004830: tryptophan-tRNA ligase activity | 2.19E-05 |
| 3 | GO:0004820: glycine-tRNA ligase activity | 2.19E-05 |
| 4 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 2.19E-05 |
| 5 | GO:0004817: cysteine-tRNA ligase activity | 5.64E-05 |
| 6 | GO:0008479: queuine tRNA-ribosyltransferase activity | 5.64E-05 |
| 7 | GO:0043023: ribosomal large subunit binding | 1.49E-04 |
| 8 | GO:0001872: (1->3)-beta-D-glucan binding | 1.49E-04 |
| 9 | GO:0016851: magnesium chelatase activity | 1.49E-04 |
| 10 | GO:0001053: plastid sigma factor activity | 2.04E-04 |
| 11 | GO:0016987: sigma factor activity | 2.04E-04 |
| 12 | GO:0044183: protein binding involved in protein folding | 9.07E-04 |
| 13 | GO:0000175: 3'-5'-exoribonuclease activity | 1.07E-03 |
| 14 | GO:0003723: RNA binding | 1.14E-03 |
| 15 | GO:0008266: poly(U) RNA binding | 1.16E-03 |
| 16 | GO:0004812: aminoacyl-tRNA ligase activity | 2.04E-03 |
| 17 | GO:0003729: mRNA binding | 2.65E-03 |
| 18 | GO:0030247: polysaccharide binding | 3.73E-03 |
| 19 | GO:0003746: translation elongation factor activity | 4.70E-03 |
| 20 | GO:0043621: protein self-association | 5.91E-03 |
| 21 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.23E-03 |
| 22 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 6.88E-03 |
| 23 | GO:0051082: unfolded protein binding | 8.79E-03 |
| 24 | GO:0019843: rRNA binding | 1.03E-02 |
| 25 | GO:0008565: protein transporter activity | 1.17E-02 |
| 26 | GO:0003743: translation initiation factor activity | 1.44E-02 |
| 27 | GO:0016887: ATPase activity | 3.70E-02 |
| 28 | GO:0016740: transferase activity | 4.69E-02 |
| 29 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.03E-17 |
| 2 | GO:0009570: chloroplast stroma | 6.50E-13 |
| 3 | GO:0009579: thylakoid | 5.20E-06 |
| 4 | GO:0009941: chloroplast envelope | 7.29E-06 |
| 5 | GO:0009654: photosystem II oxygen evolving complex | 4.24E-05 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.66E-05 |
| 7 | GO:0009539: photosystem II reaction center | 5.98E-04 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 7.79E-04 |
| 9 | GO:0009508: plastid chromosome | 1.07E-03 |
| 10 | GO:0019898: extrinsic component of membrane | 2.49E-03 |
| 11 | GO:0010319: stromule | 3.09E-03 |
| 12 | GO:0009295: nucleoid | 3.09E-03 |
| 13 | GO:0030529: intracellular ribonucleoprotein complex | 3.34E-03 |
| 14 | GO:0031977: thylakoid lumen | 5.30E-03 |
| 15 | GO:0009706: chloroplast inner membrane | 8.79E-03 |
| 16 | GO:0005623: cell | 1.05E-02 |
| 17 | GO:0005759: mitochondrial matrix | 1.21E-02 |
| 18 | GO:0009536: plastid | 1.33E-02 |
| 19 | GO:0046658: anchored component of plasma membrane | 1.58E-02 |
| 20 | GO:0031969: chloroplast membrane | 2.05E-02 |
| 21 | GO:0022626: cytosolic ribosome | 3.95E-02 |
| 22 | GO:0009534: chloroplast thylakoid | 4.66E-02 |