Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G41840

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009967: positive regulation of signal transduction0.00E+00
2GO:0006412: translation3.07E-121
3GO:0042254: ribosome biogenesis1.19E-35
4GO:0000027: ribosomal large subunit assembly1.14E-11
5GO:0071215: cellular response to abscisic acid stimulus2.16E-05
6GO:0009955: adaxial/abaxial pattern specification3.64E-05
7GO:0006407: rRNA export from nucleus1.08E-04
8GO:0000461: endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.08E-04
9GO:0000447: endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)1.08E-04
10GO:0048569: post-embryonic animal organ development2.52E-04
11GO:1902626: assembly of large subunit precursor of preribosome4.19E-04
12GO:0002181: cytoplasmic translation4.19E-04
13GO:0010476: gibberellin mediated signaling pathway4.19E-04
14GO:0042256: mature ribosome assembly4.19E-04
15GO:0044205: 'de novo' UMP biosynthetic process7.98E-04
16GO:0042274: ribosomal small subunit biogenesis7.98E-04
17GO:0009845: seed germination8.86E-04
18GO:0000470: maturation of LSU-rRNA1.23E-03
19GO:0000911: cytokinesis by cell plate formation1.47E-03
20GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process1.73E-03
21GO:0000028: ribosomal small subunit assembly2.00E-03
22GO:0009409: response to cold2.18E-03
23GO:0006526: arginine biosynthetic process2.28E-03
24GO:0009644: response to high light intensity2.76E-03
25GO:0009965: leaf morphogenesis2.87E-03
26GO:0006414: translational elongation3.45E-03
27GO:0010015: root morphogenesis3.53E-03
28GO:0006913: nucleocytoplasmic transport3.53E-03
29GO:0006417: regulation of translation3.79E-03
30GO:0048367: shoot system development4.18E-03
31GO:0010229: inflorescence development4.23E-03
32GO:0010102: lateral root morphogenesis4.23E-03
33GO:0006541: glutamine metabolic process4.59E-03
34GO:0040007: growth7.42E-03
35GO:0006413: translational initiation7.82E-03
36GO:0009735: response to cytokinin8.20E-03
37GO:0009749: response to glucose1.02E-02
38GO:0009791: post-embryonic development1.02E-02
39GO:0010090: trichome morphogenesis1.18E-02
40GO:0008283: cell proliferation2.38E-02
41GO:0048364: root development2.49E-02
42GO:0006364: rRNA processing2.94E-02
43GO:0009620: response to fungus3.55E-02
RankGO TermAdjusted P value
1GO:0005078: MAP-kinase scaffold activity0.00E+00
2GO:0003735: structural constituent of ribosome1.91E-149
3GO:0003729: mRNA binding7.41E-26
4GO:0019843: rRNA binding1.21E-15
5GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity1.08E-04
6GO:0032947: protein complex scaffold4.19E-04
7GO:0070181: small ribosomal subunit rRNA binding4.19E-04
8GO:0008097: 5S rRNA binding6.01E-04
9GO:0008135: translation factor activity, RNA binding2.28E-03
10GO:0004871: signal transducer activity3.61E-03
11GO:0000166: nucleotide binding9.19E-03
12GO:0003723: RNA binding1.64E-02
RankGO TermAdjusted P value
1GO:0022626: cytosolic ribosome3.39E-108
2GO:0022625: cytosolic large ribosomal subunit3.50E-86
3GO:0005840: ribosome1.76E-83
4GO:0022627: cytosolic small ribosomal subunit5.42E-54
5GO:0005737: cytoplasm5.43E-43
6GO:0005730: nucleolus8.01E-30
7GO:0005829: cytosol3.02E-29
8GO:0009506: plasmodesma1.23E-18
9GO:0005774: vacuolar membrane1.66E-16
10GO:0015934: large ribosomal subunit9.42E-15
11GO:0016020: membrane2.14E-13
12GO:0015935: small ribosomal subunit2.29E-11
13GO:0005618: cell wall2.96E-07
14GO:0005773: vacuole1.34E-06
15GO:0009507: chloroplast1.95E-05
16GO:0005886: plasma membrane7.93E-05
17GO:0005951: carbamoyl-phosphate synthase complex1.08E-04
18GO:0030686: 90S preribosome1.08E-04
19GO:0005622: intracellular1.02E-03
20GO:0005834: heterotrimeric G-protein complex4.31E-03
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Gene type



Gene DE type