co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G41700

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0000162: tryptophan biosynthetic process	5.57E-07
2	GO:0009609: response to symbiotic bacterium	3.12E-05
3	GO:0006643: membrane lipid metabolic process	3.12E-05
4	GO:0006979: response to oxidative stress	5.51E-05
5	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	7.88E-05
6	GO:0051176: positive regulation of sulfur metabolic process	1.37E-04
7	GO:0009617: response to bacterium	1.86E-04
8	GO:0000187: activation of MAPK activity	2.04E-04
9	GO:0048194: Golgi vesicle budding	2.04E-04
10	GO:0043207: response to external biotic stimulus	2.04E-04
11	GO:0048830: adventitious root development	2.76E-04
12	GO:1902584: positive regulation of response to water deprivation	2.76E-04
13	GO:0010600: regulation of auxin biosynthetic process	2.76E-04
14	GO:0009723: response to ethylene	3.22E-04
15	GO:0009759: indole glucosinolate biosynthetic process	4.34E-04
16	GO:0060918: auxin transport	4.34E-04
17	GO:0006508: proteolysis	5.04E-04
18	GO:0010044: response to aluminum ion	6.07E-04
19	GO:0009610: response to symbiotic fungus	6.07E-04
20	GO:0046470: phosphatidylcholine metabolic process	6.07E-04
21	GO:0071446: cellular response to salicylic acid stimulus	6.07E-04
22	GO:2000031: regulation of salicylic acid mediated signaling pathway	7.94E-04
23	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	7.94E-04
24	GO:0009626: plant-type hypersensitive response	8.92E-04
25	GO:0043069: negative regulation of programmed cell death	1.10E-03
26	GO:0009641: shade avoidance	1.10E-03
27	GO:0006995: cellular response to nitrogen starvation	1.10E-03
28	GO:0009684: indoleacetic acid biosynthetic process	1.20E-03
29	GO:0009682: induced systemic resistance	1.20E-03
30	GO:0052544: defense response by callose deposition in cell wall	1.20E-03
31	GO:0006952: defense response	1.41E-03
32	GO:0010150: leaf senescence	1.69E-03
33	GO:0009814: defense response, incompatible interaction	2.32E-03
34	GO:0016226: iron-sulfur cluster assembly	2.32E-03
35	GO:0009625: response to insect	2.46E-03
36	GO:0006012: galactose metabolic process	2.46E-03
37	GO:0071215: cellular response to abscisic acid stimulus	2.46E-03
38	GO:0000413: protein peptidyl-prolyl isomerization	2.90E-03
39	GO:0010051: xylem and phloem pattern formation	2.90E-03
40	GO:0042631: cellular response to water deprivation	2.90E-03
41	GO:0042391: regulation of membrane potential	2.90E-03
42	GO:0010197: polar nucleus fusion	3.05E-03
43	GO:0008360: regulation of cell shape	3.05E-03
44	GO:0009646: response to absence of light	3.20E-03
45	GO:0009851: auxin biosynthetic process	3.36E-03
46	GO:0000302: response to reactive oxygen species	3.51E-03
47	GO:0030163: protein catabolic process	3.84E-03
48	GO:0016042: lipid catabolic process	4.57E-03
49	GO:0009816: defense response to bacterium, incompatible interaction	4.69E-03
50	GO:0009627: systemic acquired resistance	4.87E-03
51	GO:0010311: lateral root formation	5.60E-03
52	GO:0009407: toxin catabolic process	5.79E-03
53	GO:0009631: cold acclimation	5.99E-03
54	GO:0010119: regulation of stomatal movement	5.99E-03
55	GO:0006099: tricarboxylic acid cycle	6.58E-03
56	GO:0010114: response to red light	7.60E-03
57	GO:0051707: response to other organism	7.60E-03
58	GO:0009636: response to toxic substance	8.24E-03
59	GO:0000165: MAPK cascade	8.68E-03
60	GO:0031347: regulation of defense response	8.68E-03
61	GO:0009620: response to fungus	1.13E-02
62	GO:0009058: biosynthetic process	1.46E-02
63	GO:0009790: embryo development	1.57E-02
64	GO:0042742: defense response to bacterium	1.69E-02
65	GO:0040008: regulation of growth	1.71E-02
66	GO:0006470: protein dephosphorylation	1.94E-02
67	GO:0007166: cell surface receptor signaling pathway	1.94E-02
68	GO:0009409: response to cold	2.29E-02
69	GO:0010200: response to chitin	2.88E-02
70	GO:0044550: secondary metabolite biosynthetic process	2.98E-02
71	GO:0009751: response to salicylic acid	3.67E-02
72	GO:0006468: protein phosphorylation	3.75E-02
73	GO:0009753: response to jasmonic acid	3.90E-02
74	GO:0016310: phosphorylation	4.14E-02

Rank	GO Term	Adjusted P value
1	GO:0015370: solute:sodium symporter activity	0.00E+00
2	GO:0004012: phospholipid-translocating ATPase activity	4.83E-06
3	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	3.12E-05
4	GO:0004425: indole-3-glycerol-phosphate synthase activity	3.12E-05
5	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.71E-05
6	GO:0004190: aspartic-type endopeptidase activity	4.92E-05
7	GO:0004049: anthranilate synthase activity	1.37E-04
8	GO:0015204: urea transmembrane transporter activity	2.76E-04
9	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	3.53E-04
10	GO:0004708: MAP kinase kinase activity	6.99E-04
11	GO:0004034: aldose 1-epimerase activity	6.99E-04
12	GO:0003843: 1,3-beta-D-glucan synthase activity	7.94E-04
13	GO:0004630: phospholipase D activity	7.94E-04
14	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	7.94E-04
15	GO:0008047: enzyme activator activity	1.10E-03
16	GO:0030552: cAMP binding	1.67E-03
17	GO:0030553: cGMP binding	1.67E-03
18	GO:0005216: ion channel activity	2.05E-03
19	GO:0008810: cellulase activity	2.46E-03
20	GO:0000287: magnesium ion binding	2.54E-03
21	GO:0005249: voltage-gated potassium channel activity	2.90E-03
22	GO:0030551: cyclic nucleotide binding	2.90E-03
23	GO:0016853: isomerase activity	3.20E-03
24	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.12E-03
25	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	4.17E-03
26	GO:0051213: dioxygenase activity	4.52E-03
27	GO:0030247: polysaccharide binding	5.05E-03
28	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	6.38E-03
29	GO:0004364: glutathione transferase activity	7.39E-03
30	GO:0015293: symporter activity	8.24E-03
31	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	8.46E-03
32	GO:0016298: lipase activity	9.59E-03
33	GO:0016301: kinase activity	9.79E-03
34	GO:0008234: cysteine-type peptidase activity	1.01E-02
35	GO:0019825: oxygen binding	1.19E-02
36	GO:0016746: transferase activity, transferring acyl groups	1.22E-02
37	GO:0005516: calmodulin binding	1.25E-02
38	GO:0005506: iron ion binding	1.66E-02
39	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.68E-02
40	GO:0016788: hydrolase activity, acting on ester bonds	2.44E-02
41	GO:0043531: ADP binding	2.57E-02
42	GO:0020037: heme binding	2.67E-02
43	GO:0008233: peptidase activity	2.77E-02
44	GO:0061630: ubiquitin protein ligase activity	2.91E-02
45	GO:0052689: carboxylic ester hydrolase activity	3.02E-02
46	GO:0004722: protein serine/threonine phosphatase activity	3.41E-02

Rank	GO Term	Adjusted P value
1	GO:0045252: oxoglutarate dehydrogenase complex	3.12E-05
2	GO:0005950: anthranilate synthase complex	7.88E-05
3	GO:0005886: plasma membrane	4.04E-04
4	GO:0000148: 1,3-beta-D-glucan synthase complex	7.94E-04
5	GO:0009504: cell plate	3.36E-03
6	GO:0005887: integral component of plasma membrane	6.37E-03
7	GO:0016021: integral component of membrane	1.54E-02
8	GO:0046658: anchored component of plasma membrane	2.16E-02