GO Enrichment Analysis of Co-expressed Genes with
AT2G40760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0043489: RNA stabilization | 1.04E-05 |
| 4 | GO:0006426: glycyl-tRNA aminoacylation | 1.04E-05 |
| 5 | GO:0010581: regulation of starch biosynthetic process | 5.03E-05 |
| 6 | GO:0009409: response to cold | 7.25E-05 |
| 7 | GO:0009854: oxidative photosynthetic carbon pathway | 2.11E-04 |
| 8 | GO:0010196: nonphotochemical quenching | 2.50E-04 |
| 9 | GO:0045995: regulation of embryonic development | 2.50E-04 |
| 10 | GO:0022900: electron transport chain | 3.32E-04 |
| 11 | GO:0019430: removal of superoxide radicals | 3.32E-04 |
| 12 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.18E-04 |
| 13 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.18E-04 |
| 14 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.63E-04 |
| 15 | GO:0043085: positive regulation of catalytic activity | 5.09E-04 |
| 16 | GO:0006006: glucose metabolic process | 6.04E-04 |
| 17 | GO:0009767: photosynthetic electron transport chain | 6.04E-04 |
| 18 | GO:0019253: reductive pentose-phosphate cycle | 6.53E-04 |
| 19 | GO:0006412: translation | 6.73E-04 |
| 20 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.53E-04 |
| 21 | GO:0016226: iron-sulfur cluster assembly | 9.65E-04 |
| 22 | GO:0009561: megagametogenesis | 1.08E-03 |
| 23 | GO:0010027: thylakoid membrane organization | 1.83E-03 |
| 24 | GO:0015995: chlorophyll biosynthetic process | 2.04E-03 |
| 25 | GO:0006508: proteolysis | 2.06E-03 |
| 26 | GO:0055114: oxidation-reduction process | 2.34E-03 |
| 27 | GO:0009631: cold acclimation | 2.41E-03 |
| 28 | GO:0009853: photorespiration | 2.56E-03 |
| 29 | GO:0045087: innate immune response | 2.56E-03 |
| 30 | GO:0009744: response to sucrose | 3.04E-03 |
| 31 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.81E-03 |
| 32 | GO:0006096: glycolytic process | 4.17E-03 |
| 33 | GO:0042742: defense response to bacterium | 4.36E-03 |
| 34 | GO:0006396: RNA processing | 4.82E-03 |
| 35 | GO:0042744: hydrogen peroxide catabolic process | 6.03E-03 |
| 36 | GO:0009790: embryo development | 6.14E-03 |
| 37 | GO:0006633: fatty acid biosynthetic process | 6.46E-03 |
| 38 | GO:0009451: RNA modification | 7.00E-03 |
| 39 | GO:0009793: embryo development ending in seed dormancy | 1.01E-02 |
| 40 | GO:0080167: response to karrikin | 1.09E-02 |
| 41 | GO:0015979: photosynthesis | 1.19E-02 |
| 42 | GO:0045454: cell redox homeostasis | 1.23E-02 |
| 43 | GO:0006397: mRNA processing | 1.47E-02 |
| 44 | GO:0009735: response to cytokinin | 2.02E-02 |
| 45 | GO:0009416: response to light stimulus | 2.15E-02 |
| 46 | GO:0046686: response to cadmium ion | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 2 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 3 | GO:0008266: poly(U) RNA binding | 8.15E-06 |
| 4 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.04E-05 |
| 5 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.04E-05 |
| 6 | GO:0004820: glycine-tRNA ligase activity | 1.04E-05 |
| 7 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 1.04E-05 |
| 8 | GO:0019843: rRNA binding | 1.05E-05 |
| 9 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.78E-05 |
| 10 | GO:0042389: omega-3 fatty acid desaturase activity | 2.78E-05 |
| 11 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 5.03E-05 |
| 12 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 7.70E-05 |
| 13 | GO:0004222: metalloendopeptidase activity | 8.81E-05 |
| 14 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.48E-04 |
| 15 | GO:0046872: metal ion binding | 1.53E-04 |
| 16 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.32E-04 |
| 17 | GO:0008047: enzyme activator activity | 4.63E-04 |
| 18 | GO:0031072: heat shock protein binding | 6.04E-04 |
| 19 | GO:0051536: iron-sulfur cluster binding | 8.05E-04 |
| 20 | GO:0003735: structural constituent of ribosome | 1.20E-03 |
| 21 | GO:0004791: thioredoxin-disulfide reductase activity | 1.31E-03 |
| 22 | GO:0009055: electron carrier activity | 1.34E-03 |
| 23 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.56E-03 |
| 24 | GO:0050661: NADP binding | 2.80E-03 |
| 25 | GO:0004185: serine-type carboxypeptidase activity | 3.04E-03 |
| 26 | GO:0051287: NAD binding | 3.46E-03 |
| 27 | GO:0051082: unfolded protein binding | 4.73E-03 |
| 28 | GO:0003723: RNA binding | 3.42E-02 |
| 29 | GO:0003729: mRNA binding | 4.73E-02 |
| 30 | GO:0020037: heme binding | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000408: EKC/KEOPS complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 6.47E-20 |
| 3 | GO:0009570: chloroplast stroma | 4.13E-11 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.95E-10 |
| 5 | GO:0009941: chloroplast envelope | 2.55E-07 |
| 6 | GO:0009579: thylakoid | 4.35E-07 |
| 7 | GO:0009534: chloroplast thylakoid | 4.47E-07 |
| 8 | GO:0000311: plastid large ribosomal subunit | 5.89E-06 |
| 9 | GO:0009547: plastid ribosome | 1.04E-05 |
| 10 | GO:0042170: plastid membrane | 2.78E-05 |
| 11 | GO:0042646: plastid nucleoid | 7.70E-05 |
| 12 | GO:0009512: cytochrome b6f complex | 1.40E-04 |
| 13 | GO:0016363: nuclear matrix | 2.11E-04 |
| 14 | GO:0009706: chloroplast inner membrane | 2.70E-04 |
| 15 | GO:0009543: chloroplast thylakoid lumen | 3.38E-04 |
| 16 | GO:0005840: ribosome | 5.44E-04 |
| 17 | GO:0010319: stromule | 1.70E-03 |
| 18 | GO:0030529: intracellular ribonucleoprotein complex | 1.83E-03 |
| 19 | GO:0015934: large ribosomal subunit | 2.41E-03 |
| 20 | GO:0031969: chloroplast membrane | 1.09E-02 |
| 21 | GO:0005743: mitochondrial inner membrane | 1.36E-02 |
| 22 | GO:0022626: cytosolic ribosome | 2.08E-02 |
| 23 | GO:0009536: plastid | 4.12E-02 |