Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G39960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019673: GDP-mannose metabolic process2.75E-06
2GO:0010043: response to zinc ion1.40E-05
3GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.45E-05
4GO:0009826: unidimensional cell growth1.36E-04
5GO:0007030: Golgi organization2.52E-04
6GO:0009306: protein secretion3.94E-04
7GO:0009407: toxin catabolic process8.45E-04
8GO:0006979: response to oxidative stress9.29E-04
9GO:0040008: regulation of growth2.32E-03
10GO:0016192: vesicle-mediated transport3.84E-03
11GO:0009734: auxin-activated signaling pathway6.13E-03
12GO:0006511: ubiquitin-dependent protein catabolic process8.91E-03
13GO:0042742: defense response to bacterium1.18E-02
14GO:0009733: response to auxin1.28E-02
15GO:0046686: response to cadmium ion1.62E-02
16GO:0007275: multicellular organism development1.91E-02
17GO:0055114: oxidation-reduction process2.72E-02
18GO:0006952: defense response4.01E-02
RankGO TermAdjusted P value
1GO:0004602: glutathione peroxidase activity9.29E-08
2GO:0008446: GDP-mannose 4,6-dehydratase activity2.75E-06
3GO:0043295: glutathione binding8.18E-05
4GO:0004298: threonine-type endopeptidase activity3.32E-04
5GO:0005525: GTP binding7.58E-04
6GO:0003746: translation elongation factor activity9.23E-04
7GO:0004364: glutathione transferase activity1.06E-03
8GO:0004601: peroxidase activity3.21E-03
9GO:0008233: peptidase activity3.67E-03
10GO:0005507: copper ion binding9.21E-03
11GO:0003674: molecular_function3.10E-02
RankGO TermAdjusted P value
1GO:0030173: integral component of Golgi membrane6.80E-05
2GO:0019773: proteasome core complex, alpha-subunit complex1.11E-04
3GO:0031901: early endosome membrane1.27E-04
4GO:0005839: proteasome core complex3.32E-04
5GO:0005802: trans-Golgi network7.39E-04
6GO:0005768: endosome8.35E-04
7GO:0000502: proteasome complex1.32E-03
8GO:0009507: chloroplast1.61E-03
9GO:0005829: cytosol1.95E-03
10GO:0005794: Golgi apparatus2.37E-03
11GO:0031969: chloroplast membrane3.71E-03
12GO:0022626: cytosolic ribosome6.98E-03
13GO:0009579: thylakoid8.15E-03
14GO:0009536: plastid1.36E-02
15GO:0048046: apoplast2.96E-02
16GO:0009941: chloroplast envelope3.56E-02
17GO:0005773: vacuole3.88E-02
18GO:0009570: chloroplast stroma4.52E-02
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Gene type



Gene DE type