GO Enrichment Analysis of Co-expressed Genes with
AT2G39900
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019323: pentose catabolic process | 0.00E+00 |
| 2 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 3 | GO:0046322: negative regulation of fatty acid oxidation | 0.00E+00 |
| 4 | GO:0042493: response to drug | 0.00E+00 |
| 5 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 6 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 7 | GO:0010207: photosystem II assembly | 1.52E-06 |
| 8 | GO:0007017: microtubule-based process | 4.08E-06 |
| 9 | GO:0090391: granum assembly | 1.31E-05 |
| 10 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.94E-05 |
| 11 | GO:0009828: plant-type cell wall loosening | 3.42E-05 |
| 12 | GO:0006869: lipid transport | 4.23E-05 |
| 13 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.67E-04 |
| 14 | GO:0010196: nonphotochemical quenching | 2.19E-04 |
| 15 | GO:0042335: cuticle development | 2.34E-04 |
| 16 | GO:0019510: S-adenosylhomocysteine catabolic process | 2.82E-04 |
| 17 | GO:0060627: regulation of vesicle-mediated transport | 2.82E-04 |
| 18 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 2.82E-04 |
| 19 | GO:0005980: glycogen catabolic process | 2.82E-04 |
| 20 | GO:0000032: cell wall mannoprotein biosynthetic process | 2.82E-04 |
| 21 | GO:0032025: response to cobalt ion | 2.82E-04 |
| 22 | GO:0044262: cellular carbohydrate metabolic process | 2.82E-04 |
| 23 | GO:0042759: long-chain fatty acid biosynthetic process | 2.82E-04 |
| 24 | GO:0043686: co-translational protein modification | 2.82E-04 |
| 25 | GO:1902458: positive regulation of stomatal opening | 2.82E-04 |
| 26 | GO:0009664: plant-type cell wall organization | 2.84E-04 |
| 27 | GO:0005975: carbohydrate metabolic process | 3.23E-04 |
| 28 | GO:0071555: cell wall organization | 3.80E-04 |
| 29 | GO:0009826: unidimensional cell growth | 4.78E-04 |
| 30 | GO:0042761: very long-chain fatty acid biosynthetic process | 4.86E-04 |
| 31 | GO:0010027: thylakoid membrane organization | 5.58E-04 |
| 32 | GO:0006949: syncytium formation | 5.67E-04 |
| 33 | GO:0043039: tRNA aminoacylation | 6.19E-04 |
| 34 | GO:0019388: galactose catabolic process | 6.19E-04 |
| 35 | GO:0033353: S-adenosylmethionine cycle | 6.19E-04 |
| 36 | GO:0071258: cellular response to gravity | 6.19E-04 |
| 37 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 6.19E-04 |
| 38 | GO:0010411: xyloglucan metabolic process | 6.87E-04 |
| 39 | GO:0007568: aging | 9.36E-04 |
| 40 | GO:0033591: response to L-ascorbic acid | 1.00E-03 |
| 41 | GO:0046168: glycerol-3-phosphate catabolic process | 1.00E-03 |
| 42 | GO:1901562: response to paraquat | 1.00E-03 |
| 43 | GO:0080055: low-affinity nitrate transport | 1.00E-03 |
| 44 | GO:0006065: UDP-glucuronate biosynthetic process | 1.00E-03 |
| 45 | GO:0090506: axillary shoot meristem initiation | 1.00E-03 |
| 46 | GO:0006633: fatty acid biosynthetic process | 1.10E-03 |
| 47 | GO:0010025: wax biosynthetic process | 1.18E-03 |
| 48 | GO:0016042: lipid catabolic process | 1.40E-03 |
| 49 | GO:0006072: glycerol-3-phosphate metabolic process | 1.44E-03 |
| 50 | GO:0009650: UV protection | 1.44E-03 |
| 51 | GO:0010306: rhamnogalacturonan II biosynthetic process | 1.44E-03 |
| 52 | GO:0009590: detection of gravity | 1.44E-03 |
| 53 | GO:0050482: arachidonic acid secretion | 1.44E-03 |
| 54 | GO:0009413: response to flooding | 1.44E-03 |
| 55 | GO:0009298: GDP-mannose biosynthetic process | 1.44E-03 |
| 56 | GO:0009102: biotin biosynthetic process | 1.44E-03 |
| 57 | GO:0042546: cell wall biogenesis | 1.51E-03 |
| 58 | GO:0009765: photosynthesis, light harvesting | 1.92E-03 |
| 59 | GO:0006085: acetyl-CoA biosynthetic process | 1.92E-03 |
| 60 | GO:0006183: GTP biosynthetic process | 1.92E-03 |
| 61 | GO:0009956: radial pattern formation | 1.92E-03 |
| 62 | GO:0000413: protein peptidyl-prolyl isomerization | 2.39E-03 |
| 63 | GO:0080110: sporopollenin biosynthetic process | 2.46E-03 |
| 64 | GO:0048359: mucilage metabolic process involved in seed coat development | 2.46E-03 |
| 65 | GO:0016120: carotene biosynthetic process | 2.46E-03 |
| 66 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.46E-03 |
| 67 | GO:0031365: N-terminal protein amino acid modification | 2.46E-03 |
| 68 | GO:0009107: lipoate biosynthetic process | 2.46E-03 |
| 69 | GO:0016123: xanthophyll biosynthetic process | 2.46E-03 |
| 70 | GO:0006665: sphingolipid metabolic process | 2.46E-03 |
| 71 | GO:0019252: starch biosynthetic process | 2.97E-03 |
| 72 | GO:0033365: protein localization to organelle | 3.03E-03 |
| 73 | GO:0006014: D-ribose metabolic process | 3.03E-03 |
| 74 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 3.03E-03 |
| 75 | GO:0071470: cellular response to osmotic stress | 3.65E-03 |
| 76 | GO:0010067: procambium histogenesis | 3.65E-03 |
| 77 | GO:0009612: response to mechanical stimulus | 3.65E-03 |
| 78 | GO:0010555: response to mannitol | 3.65E-03 |
| 79 | GO:0015979: photosynthesis | 4.19E-03 |
| 80 | GO:0009645: response to low light intensity stimulus | 4.30E-03 |
| 81 | GO:0005978: glycogen biosynthetic process | 4.99E-03 |
| 82 | GO:0009642: response to light intensity | 4.99E-03 |
| 83 | GO:0006353: DNA-templated transcription, termination | 4.99E-03 |
| 84 | GO:2000070: regulation of response to water deprivation | 4.99E-03 |
| 85 | GO:0006644: phospholipid metabolic process | 4.99E-03 |
| 86 | GO:0042128: nitrate assimilation | 5.12E-03 |
| 87 | GO:0015996: chlorophyll catabolic process | 5.72E-03 |
| 88 | GO:0007186: G-protein coupled receptor signaling pathway | 5.72E-03 |
| 89 | GO:0006629: lipid metabolic process | 6.19E-03 |
| 90 | GO:0006754: ATP biosynthetic process | 6.48E-03 |
| 91 | GO:0015780: nucleotide-sugar transport | 6.48E-03 |
| 92 | GO:0016051: carbohydrate biosynthetic process | 7.59E-03 |
| 93 | GO:0009409: response to cold | 7.85E-03 |
| 94 | GO:0019684: photosynthesis, light reaction | 8.97E-03 |
| 95 | GO:0010015: root morphogenesis | 8.97E-03 |
| 96 | GO:0045037: protein import into chloroplast stroma | 9.88E-03 |
| 97 | GO:0006006: glucose metabolic process | 1.08E-02 |
| 98 | GO:0009933: meristem structural organization | 1.18E-02 |
| 99 | GO:0010223: secondary shoot formation | 1.18E-02 |
| 100 | GO:0009266: response to temperature stimulus | 1.18E-02 |
| 101 | GO:0042538: hyperosmotic salinity response | 1.23E-02 |
| 102 | GO:0010167: response to nitrate | 1.28E-02 |
| 103 | GO:0009735: response to cytokinin | 1.29E-02 |
| 104 | GO:0006486: protein glycosylation | 1.32E-02 |
| 105 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.38E-02 |
| 106 | GO:0006833: water transport | 1.38E-02 |
| 107 | GO:0006857: oligopeptide transport | 1.42E-02 |
| 108 | GO:0019344: cysteine biosynthetic process | 1.48E-02 |
| 109 | GO:0019953: sexual reproduction | 1.59E-02 |
| 110 | GO:0006418: tRNA aminoacylation for protein translation | 1.59E-02 |
| 111 | GO:0016998: cell wall macromolecule catabolic process | 1.70E-02 |
| 112 | GO:0010431: seed maturation | 1.70E-02 |
| 113 | GO:0030245: cellulose catabolic process | 1.81E-02 |
| 114 | GO:0006730: one-carbon metabolic process | 1.81E-02 |
| 115 | GO:0031348: negative regulation of defense response | 1.81E-02 |
| 116 | GO:0009624: response to nematode | 1.89E-02 |
| 117 | GO:0045454: cell redox homeostasis | 1.90E-02 |
| 118 | GO:0009294: DNA mediated transformation | 1.93E-02 |
| 119 | GO:0009411: response to UV | 1.93E-02 |
| 120 | GO:0001944: vasculature development | 1.93E-02 |
| 121 | GO:0006012: galactose metabolic process | 1.93E-02 |
| 122 | GO:0010584: pollen exine formation | 2.05E-02 |
| 123 | GO:0019722: calcium-mediated signaling | 2.05E-02 |
| 124 | GO:0010091: trichome branching | 2.05E-02 |
| 125 | GO:0010089: xylem development | 2.05E-02 |
| 126 | GO:0016117: carotenoid biosynthetic process | 2.17E-02 |
| 127 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.17E-02 |
| 128 | GO:0000226: microtubule cytoskeleton organization | 2.29E-02 |
| 129 | GO:0080022: primary root development | 2.29E-02 |
| 130 | GO:0034220: ion transmembrane transport | 2.29E-02 |
| 131 | GO:0010087: phloem or xylem histogenesis | 2.29E-02 |
| 132 | GO:0010305: leaf vascular tissue pattern formation | 2.42E-02 |
| 133 | GO:0010182: sugar mediated signaling pathway | 2.42E-02 |
| 134 | GO:0048868: pollen tube development | 2.42E-02 |
| 135 | GO:0010583: response to cyclopentenone | 2.94E-02 |
| 136 | GO:0045490: pectin catabolic process | 3.27E-02 |
| 137 | GO:0007267: cell-cell signaling | 3.36E-02 |
| 138 | GO:0009739: response to gibberellin | 3.65E-02 |
| 139 | GO:0007166: cell surface receptor signaling pathway | 3.73E-02 |
| 140 | GO:0009627: systemic acquired resistance | 3.95E-02 |
| 141 | GO:0009414: response to water deprivation | 4.03E-02 |
| 142 | GO:0015995: chlorophyll biosynthetic process | 4.10E-02 |
| 143 | GO:0006979: response to oxidative stress | 4.22E-02 |
| 144 | GO:0009817: defense response to fungus, incompatible interaction | 4.41E-02 |
| 145 | GO:0000160: phosphorelay signal transduction system | 4.56E-02 |
| 146 | GO:0009834: plant-type secondary cell wall biogenesis | 4.72E-02 |
| 147 | GO:0009407: toxin catabolic process | 4.72E-02 |
| 148 | GO:0007165: signal transduction | 4.73E-02 |
| 149 | GO:0055114: oxidation-reduction process | 4.83E-02 |
| 150 | GO:0010043: response to zinc ion | 4.88E-02 |
| 151 | GO:0009737: response to abscisic acid | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 2 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 3 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 6 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 7 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 8 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 9 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 10 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 11 | GO:0004076: biotin synthase activity | 0.00E+00 |
| 12 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 2.94E-05 |
| 13 | GO:0005200: structural constituent of cytoskeleton | 3.86E-05 |
| 14 | GO:0016788: hydrolase activity, acting on ester bonds | 8.85E-05 |
| 15 | GO:0008289: lipid binding | 1.45E-04 |
| 16 | GO:0051920: peroxiredoxin activity | 1.67E-04 |
| 17 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.51E-04 |
| 18 | GO:0016209: antioxidant activity | 2.76E-04 |
| 19 | GO:0047259: glucomannan 4-beta-mannosyltransferase activity | 2.82E-04 |
| 20 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 2.82E-04 |
| 21 | GO:0004560: alpha-L-fucosidase activity | 2.82E-04 |
| 22 | GO:0004013: adenosylhomocysteinase activity | 2.82E-04 |
| 23 | GO:0008184: glycogen phosphorylase activity | 2.82E-04 |
| 24 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 2.82E-04 |
| 25 | GO:0004831: tyrosine-tRNA ligase activity | 2.82E-04 |
| 26 | GO:0042586: peptide deformylase activity | 2.82E-04 |
| 27 | GO:0004645: phosphorylase activity | 2.82E-04 |
| 28 | GO:0004476: mannose-6-phosphate isomerase activity | 2.82E-04 |
| 29 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.46E-04 |
| 30 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 4.10E-04 |
| 31 | GO:0004750: ribulose-phosphate 3-epimerase activity | 6.19E-04 |
| 32 | GO:0030385: ferredoxin:thioredoxin reductase activity | 6.19E-04 |
| 33 | GO:0016630: protochlorophyllide reductase activity | 6.19E-04 |
| 34 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 6.19E-04 |
| 35 | GO:0004614: phosphoglucomutase activity | 6.19E-04 |
| 36 | GO:0003938: IMP dehydrogenase activity | 6.19E-04 |
| 37 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.87E-04 |
| 38 | GO:0052689: carboxylic ester hydrolase activity | 8.93E-04 |
| 39 | GO:0016992: lipoate synthase activity | 1.00E-03 |
| 40 | GO:0004751: ribose-5-phosphate isomerase activity | 1.00E-03 |
| 41 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 1.00E-03 |
| 42 | GO:0003979: UDP-glucose 6-dehydrogenase activity | 1.00E-03 |
| 43 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 1.00E-03 |
| 44 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.23E-03 |
| 45 | GO:0005528: FK506 binding | 1.30E-03 |
| 46 | GO:0003878: ATP citrate synthase activity | 1.44E-03 |
| 47 | GO:0051287: NAD binding | 1.83E-03 |
| 48 | GO:0080032: methyl jasmonate esterase activity | 1.92E-03 |
| 49 | GO:0052793: pectin acetylesterase activity | 1.92E-03 |
| 50 | GO:0016491: oxidoreductase activity | 2.39E-03 |
| 51 | GO:0009922: fatty acid elongase activity | 2.46E-03 |
| 52 | GO:0004623: phospholipase A2 activity | 2.46E-03 |
| 53 | GO:0004629: phospholipase C activity | 3.03E-03 |
| 54 | GO:0080030: methyl indole-3-acetate esterase activity | 3.03E-03 |
| 55 | GO:0004747: ribokinase activity | 3.65E-03 |
| 56 | GO:0051753: mannan synthase activity | 3.65E-03 |
| 57 | GO:0004435: phosphatidylinositol phospholipase C activity | 3.65E-03 |
| 58 | GO:0043295: glutathione binding | 4.30E-03 |
| 59 | GO:0004034: aldose 1-epimerase activity | 4.99E-03 |
| 60 | GO:0052747: sinapyl alcohol dehydrogenase activity | 4.99E-03 |
| 61 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 4.99E-03 |
| 62 | GO:0008865: fructokinase activity | 4.99E-03 |
| 63 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 5.72E-03 |
| 64 | GO:0003924: GTPase activity | 6.19E-03 |
| 65 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 6.48E-03 |
| 66 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 6.59E-03 |
| 67 | GO:0015020: glucuronosyltransferase activity | 8.11E-03 |
| 68 | GO:0030234: enzyme regulator activity | 8.11E-03 |
| 69 | GO:0047372: acylglycerol lipase activity | 8.97E-03 |
| 70 | GO:0008378: galactosyltransferase activity | 9.88E-03 |
| 71 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 9.88E-03 |
| 72 | GO:0015266: protein channel activity | 1.08E-02 |
| 73 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.38E-02 |
| 74 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.38E-02 |
| 75 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.38E-02 |
| 76 | GO:0004857: enzyme inhibitor activity | 1.48E-02 |
| 77 | GO:0033612: receptor serine/threonine kinase binding | 1.70E-02 |
| 78 | GO:0030599: pectinesterase activity | 1.78E-02 |
| 79 | GO:0030570: pectate lyase activity | 1.93E-02 |
| 80 | GO:0008810: cellulase activity | 1.93E-02 |
| 81 | GO:0004871: signal transducer activity | 2.02E-02 |
| 82 | GO:0008514: organic anion transmembrane transporter activity | 2.05E-02 |
| 83 | GO:0005102: receptor binding | 2.17E-02 |
| 84 | GO:0004812: aminoacyl-tRNA ligase activity | 2.17E-02 |
| 85 | GO:0016853: isomerase activity | 2.54E-02 |
| 86 | GO:0050662: coenzyme binding | 2.54E-02 |
| 87 | GO:0019901: protein kinase binding | 2.67E-02 |
| 88 | GO:0009055: electron carrier activity | 2.70E-02 |
| 89 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.05E-02 |
| 90 | GO:0000156: phosphorelay response regulator activity | 3.08E-02 |
| 91 | GO:0005525: GTP binding | 3.09E-02 |
| 92 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.36E-02 |
| 93 | GO:0008237: metallopeptidase activity | 3.36E-02 |
| 94 | GO:0015250: water channel activity | 3.65E-02 |
| 95 | GO:0008375: acetylglucosaminyltransferase activity | 3.95E-02 |
| 96 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 4.25E-02 |
| 97 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 4.41E-02 |
| 98 | GO:0004222: metalloendopeptidase activity | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.06E-15 |
| 4 | GO:0009507: chloroplast | 6.92E-15 |
| 5 | GO:0048046: apoplast | 1.49E-13 |
| 6 | GO:0009579: thylakoid | 6.15E-13 |
| 7 | GO:0009570: chloroplast stroma | 8.77E-13 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 2.36E-12 |
| 9 | GO:0031977: thylakoid lumen | 1.88E-11 |
| 10 | GO:0005618: cell wall | 2.60E-11 |
| 11 | GO:0009534: chloroplast thylakoid | 1.34E-10 |
| 12 | GO:0009941: chloroplast envelope | 5.98E-09 |
| 13 | GO:0046658: anchored component of plasma membrane | 5.75E-06 |
| 14 | GO:0031225: anchored component of membrane | 5.85E-06 |
| 15 | GO:0009505: plant-type cell wall | 7.21E-06 |
| 16 | GO:0045298: tubulin complex | 1.36E-05 |
| 17 | GO:0010319: stromule | 3.86E-05 |
| 18 | GO:0005576: extracellular region | 6.58E-05 |
| 19 | GO:0009923: fatty acid elongase complex | 2.82E-04 |
| 20 | GO:0016020: membrane | 3.16E-04 |
| 21 | GO:0009707: chloroplast outer membrane | 7.82E-04 |
| 22 | GO:0005886: plasma membrane | 9.93E-04 |
| 23 | GO:0009528: plastid inner membrane | 1.00E-03 |
| 24 | GO:0005875: microtubule associated complex | 1.18E-03 |
| 25 | GO:0009654: photosystem II oxygen evolving complex | 1.44E-03 |
| 26 | GO:0009346: citrate lyase complex | 1.44E-03 |
| 27 | GO:0009331: glycerol-3-phosphate dehydrogenase complex | 1.44E-03 |
| 28 | GO:0015630: microtubule cytoskeleton | 1.44E-03 |
| 29 | GO:0009527: plastid outer membrane | 1.92E-03 |
| 30 | GO:0019898: extrinsic component of membrane | 2.97E-03 |
| 31 | GO:0009506: plasmodesma | 3.84E-03 |
| 32 | GO:0009533: chloroplast stromal thylakoid | 4.30E-03 |
| 33 | GO:0005874: microtubule | 1.45E-02 |
| 34 | GO:0009532: plastid stroma | 1.70E-02 |
| 35 | GO:0031410: cytoplasmic vesicle | 1.81E-02 |
| 36 | GO:0009706: chloroplast inner membrane | 1.89E-02 |
| 37 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 2.05E-02 |