co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G39660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080183: response to photooxidative stress	6.50E-06
2	GO:0019632: shikimate metabolic process	6.50E-06
3	GO:0009423: chorismate biosynthetic process	5.85E-05
4	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	7.04E-05
5	GO:0009060: aerobic respiration	1.10E-04
6	GO:0007064: mitotic sister chromatid cohesion	1.39E-04
7	GO:0009073: aromatic amino acid family biosynthetic process	1.54E-04
8	GO:0016485: protein processing	1.54E-04
9	GO:0006807: nitrogen compound metabolic process	1.86E-04
10	GO:0030150: protein import into mitochondrial matrix	2.54E-04
11	GO:0018105: peptidyl-serine phosphorylation	1.48E-03
12	GO:0009058: biosynthetic process	1.75E-03
13	GO:0010468: regulation of gene expression	2.36E-03
14	GO:0080167: response to karrikin	3.24E-03
15	GO:0046777: protein autophosphorylation	3.40E-03
16	GO:0045454: cell redox homeostasis	3.67E-03
17	GO:0009735: response to cytokinin	5.89E-03
18	GO:0009738: abscisic acid-activated signaling pathway	6.13E-03
19	GO:0035556: intracellular signal transduction	6.51E-03
20	GO:0015031: protein transport	1.22E-02
21	GO:0046686: response to cadmium ion	1.40E-02
22	GO:0009737: response to abscisic acid	1.76E-02
23	GO:0009793: embryo development ending in seed dormancy	1.86E-02
24	GO:0050832: defense response to fungus	2.23E-02
25	GO:0006508: proteolysis	2.28E-02
26	GO:0006468: protein phosphorylation	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0003855: 3-dehydroquinate dehydratase activity	0.00E+00
2	GO:0004764: shikimate 3-dehydrogenase (NADP+) activity	0.00E+00
3	GO:0005496: steroid binding	3.71E-05
4	GO:0004069: L-aspartate:2-oxoglutarate aminotransferase activity	4.74E-05
5	GO:0080130: L-phenylalanine:2-oxoglutarate aminotransferase activity	4.74E-05
6	GO:0004714: transmembrane receptor protein tyrosine kinase activity	8.28E-05
7	GO:0045309: protein phosphorylated amino acid binding	1.24E-04
8	GO:0019904: protein domain specific binding	1.54E-04
9	GO:0015266: protein channel activity	1.86E-04
10	GO:0009931: calcium-dependent protein serine/threonine kinase activity	6.32E-04
11	GO:0004683: calmodulin-dependent protein kinase activity	6.55E-04
12	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	6.99E-04
13	GO:0004222: metalloendopeptidase activity	7.44E-04
14	GO:0050661: NADP binding	8.84E-04
15	GO:0051537: 2 iron, 2 sulfur cluster binding	1.01E-03
16	GO:0004672: protein kinase activity	1.09E-03
17	GO:0015035: protein disulfide oxidoreductase activity	1.48E-03
18	GO:0030170: pyridoxal phosphate binding	1.81E-03
19	GO:0003682: chromatin binding	2.91E-03
20	GO:0004674: protein serine/threonine kinase activity	3.54E-03
21	GO:0009055: electron carrier activity	4.44E-03
22	GO:0005507: copper ion binding	8.02E-03
23	GO:0005516: calmodulin binding	8.33E-03
24	GO:0005509: calcium ion binding	9.70E-03
25	GO:0016491: oxidoreductase activity	1.25E-02
26	GO:0043565: sequence-specific DNA binding	3.28E-02

Rank	GO Term	Adjusted P value
1	GO:0031305: integral component of mitochondrial inner membrane	8.28E-05
2	GO:0005750: mitochondrial respiratory chain complex III	2.03E-04
3	GO:0005758: mitochondrial intermembrane space	2.54E-04
4	GO:0005741: mitochondrial outer membrane	2.90E-04
5	GO:0005744: mitochondrial inner membrane presequence translocase complex	3.46E-04
6	GO:0005635: nuclear envelope	1.21E-03
7	GO:0005759: mitochondrial matrix	1.97E-03
8	GO:0005774: vacuolar membrane	2.50E-03
9	GO:0005618: cell wall	2.86E-03
10	GO:0005886: plasma membrane	3.28E-03
11	GO:0005743: mitochondrial inner membrane	4.02E-03
12	GO:0009570: chloroplast stroma	4.70E-03
13	GO:0005737: cytoplasm	5.20E-03
14	GO:0009506: plasmodesma	9.48E-03
15	GO:0005730: nucleolus	1.49E-02