GO Enrichment Analysis of Co-expressed Genes with
AT2G39220
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031990: mRNA export from nucleus in response to heat stress | 0.00E+00 |
| 2 | GO:0051938: L-glutamate import | 0.00E+00 |
| 3 | GO:0043091: L-arginine import | 6.45E-07 |
| 4 | GO:0006099: tricarboxylic acid cycle | 1.10E-05 |
| 5 | GO:0003333: amino acid transmembrane transport | 1.73E-05 |
| 6 | GO:0003400: regulation of COPII vesicle coating | 1.12E-04 |
| 7 | GO:1901183: positive regulation of camalexin biosynthetic process | 1.12E-04 |
| 8 | GO:0048455: stamen formation | 1.12E-04 |
| 9 | GO:0015760: glucose-6-phosphate transport | 1.12E-04 |
| 10 | GO:1990641: response to iron ion starvation | 1.12E-04 |
| 11 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 1.12E-04 |
| 12 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 1.12E-04 |
| 13 | GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex | 1.12E-04 |
| 14 | GO:0006007: glucose catabolic process | 1.12E-04 |
| 15 | GO:0009688: abscisic acid biosynthetic process | 1.52E-04 |
| 16 | GO:0015712: hexose phosphate transport | 2.61E-04 |
| 17 | GO:0045948: positive regulation of translational initiation | 2.61E-04 |
| 18 | GO:0007051: spindle organization | 2.61E-04 |
| 19 | GO:0006101: citrate metabolic process | 2.61E-04 |
| 20 | GO:0006597: spermine biosynthetic process | 2.61E-04 |
| 21 | GO:0015802: basic amino acid transport | 2.61E-04 |
| 22 | GO:0009805: coumarin biosynthetic process | 2.61E-04 |
| 23 | GO:0051788: response to misfolded protein | 2.61E-04 |
| 24 | GO:0009636: response to toxic substance | 3.25E-04 |
| 25 | GO:0015714: phosphoenolpyruvate transport | 4.32E-04 |
| 26 | GO:0035436: triose phosphate transmembrane transport | 4.32E-04 |
| 27 | GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 4.32E-04 |
| 28 | GO:0006096: glycolytic process | 5.10E-04 |
| 29 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.19E-04 |
| 30 | GO:0046686: response to cadmium ion | 7.71E-04 |
| 31 | GO:0015713: phosphoglycerate transport | 8.23E-04 |
| 32 | GO:0010109: regulation of photosynthesis | 8.23E-04 |
| 33 | GO:0033356: UDP-L-arabinose metabolic process | 8.23E-04 |
| 34 | GO:0006090: pyruvate metabolic process | 1.04E-03 |
| 35 | GO:0006097: glyoxylate cycle | 1.04E-03 |
| 36 | GO:0006405: RNA export from nucleus | 1.04E-03 |
| 37 | GO:0010252: auxin homeostasis | 1.08E-03 |
| 38 | GO:0007035: vacuolar acidification | 1.27E-03 |
| 39 | GO:0000060: protein import into nucleus, translocation | 1.27E-03 |
| 40 | GO:0006796: phosphate-containing compound metabolic process | 1.27E-03 |
| 41 | GO:0006596: polyamine biosynthetic process | 1.27E-03 |
| 42 | GO:0009643: photosynthetic acclimation | 1.27E-03 |
| 43 | GO:0006014: D-ribose metabolic process | 1.27E-03 |
| 44 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.27E-03 |
| 45 | GO:0043248: proteasome assembly | 1.27E-03 |
| 46 | GO:0009832: plant-type cell wall biogenesis | 1.73E-03 |
| 47 | GO:0048767: root hair elongation | 1.73E-03 |
| 48 | GO:0000082: G1/S transition of mitotic cell cycle | 1.78E-03 |
| 49 | GO:0042773: ATP synthesis coupled electron transport | 1.78E-03 |
| 50 | GO:0048528: post-embryonic root development | 1.78E-03 |
| 51 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 1.78E-03 |
| 52 | GO:0009407: toxin catabolic process | 1.82E-03 |
| 53 | GO:0048658: anther wall tapetum development | 2.06E-03 |
| 54 | GO:0006102: isocitrate metabolic process | 2.06E-03 |
| 55 | GO:0009853: photorespiration | 2.08E-03 |
| 56 | GO:0006367: transcription initiation from RNA polymerase II promoter | 2.35E-03 |
| 57 | GO:0010120: camalexin biosynthetic process | 2.35E-03 |
| 58 | GO:0009699: phenylpropanoid biosynthetic process | 2.35E-03 |
| 59 | GO:0080144: amino acid homeostasis | 2.66E-03 |
| 60 | GO:0009744: response to sucrose | 2.68E-03 |
| 61 | GO:0007064: mitotic sister chromatid cohesion | 3.30E-03 |
| 62 | GO:0010162: seed dormancy process | 3.30E-03 |
| 63 | GO:0009651: response to salt stress | 3.49E-03 |
| 64 | GO:0009807: lignan biosynthetic process | 3.65E-03 |
| 65 | GO:0045037: protein import into chloroplast stroma | 4.00E-03 |
| 66 | GO:0006108: malate metabolic process | 4.36E-03 |
| 67 | GO:0006006: glucose metabolic process | 4.36E-03 |
| 68 | GO:0070588: calcium ion transmembrane transport | 5.13E-03 |
| 69 | GO:0010053: root epidermal cell differentiation | 5.13E-03 |
| 70 | GO:0009969: xyloglucan biosynthetic process | 5.13E-03 |
| 71 | GO:0007010: cytoskeleton organization | 5.93E-03 |
| 72 | GO:0006366: transcription from RNA polymerase II promoter | 6.78E-03 |
| 73 | GO:0016998: cell wall macromolecule catabolic process | 6.78E-03 |
| 74 | GO:0009733: response to auxin | 7.03E-03 |
| 75 | GO:0019748: secondary metabolic process | 7.22E-03 |
| 76 | GO:0006012: galactose metabolic process | 7.67E-03 |
| 77 | GO:0009306: protein secretion | 8.13E-03 |
| 78 | GO:0051028: mRNA transport | 8.60E-03 |
| 79 | GO:0009735: response to cytokinin | 8.71E-03 |
| 80 | GO:0080022: primary root development | 9.08E-03 |
| 81 | GO:0010118: stomatal movement | 9.08E-03 |
| 82 | GO:0009555: pollen development | 9.76E-03 |
| 83 | GO:0055114: oxidation-reduction process | 1.01E-02 |
| 84 | GO:0009749: response to glucose | 1.06E-02 |
| 85 | GO:0019252: starch biosynthetic process | 1.06E-02 |
| 86 | GO:0009851: auxin biosynthetic process | 1.06E-02 |
| 87 | GO:0030163: protein catabolic process | 1.22E-02 |
| 88 | GO:0009615: response to virus | 1.44E-02 |
| 89 | GO:0010029: regulation of seed germination | 1.50E-02 |
| 90 | GO:0009816: defense response to bacterium, incompatible interaction | 1.50E-02 |
| 91 | GO:0006974: cellular response to DNA damage stimulus | 1.56E-02 |
| 92 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.62E-02 |
| 93 | GO:0080167: response to karrikin | 1.69E-02 |
| 94 | GO:0030244: cellulose biosynthetic process | 1.74E-02 |
| 95 | GO:0006468: protein phosphorylation | 1.77E-02 |
| 96 | GO:0009737: response to abscisic acid | 1.85E-02 |
| 97 | GO:0006865: amino acid transport | 1.99E-02 |
| 98 | GO:0045454: cell redox homeostasis | 2.03E-02 |
| 99 | GO:0006839: mitochondrial transport | 2.25E-02 |
| 100 | GO:0006979: response to oxidative stress | 2.41E-02 |
| 101 | GO:0051707: response to other organism | 2.46E-02 |
| 102 | GO:0009408: response to heat | 2.51E-02 |
| 103 | GO:0006855: drug transmembrane transport | 2.75E-02 |
| 104 | GO:0009664: plant-type cell wall organization | 2.89E-02 |
| 105 | GO:0006486: protein glycosylation | 3.04E-02 |
| 106 | GO:0009809: lignin biosynthetic process | 3.04E-02 |
| 107 | GO:0009626: plant-type hypersensitive response | 3.59E-02 |
| 108 | GO:0009624: response to nematode | 3.91E-02 |
| 109 | GO:0018105: peptidyl-serine phosphorylation | 3.99E-02 |
| 110 | GO:0009845: seed germination | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990837: sequence-specific double-stranded DNA binding | 0.00E+00 |
| 2 | GO:0015189: L-lysine transmembrane transporter activity | 5.76E-06 |
| 3 | GO:0015181: arginine transmembrane transporter activity | 5.76E-06 |
| 4 | GO:0010279: indole-3-acetic acid amido synthetase activity | 1.09E-05 |
| 5 | GO:0005313: L-glutamate transmembrane transporter activity | 1.09E-05 |
| 6 | GO:0005090: Sar guanyl-nucleotide exchange factor activity | 1.12E-04 |
| 7 | GO:0016768: spermine synthase activity | 1.12E-04 |
| 8 | GO:0031127: alpha-(1,2)-fucosyltransferase activity | 1.12E-04 |
| 9 | GO:0015174: basic amino acid transmembrane transporter activity | 1.27E-04 |
| 10 | GO:0050736: O-malonyltransferase activity | 2.61E-04 |
| 11 | GO:0015036: disulfide oxidoreductase activity | 2.61E-04 |
| 12 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.61E-04 |
| 13 | GO:0003994: aconitate hydratase activity | 2.61E-04 |
| 14 | GO:0004766: spermidine synthase activity | 2.61E-04 |
| 15 | GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | 2.61E-04 |
| 16 | GO:0015152: glucose-6-phosphate transmembrane transporter activity | 2.61E-04 |
| 17 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.61E-04 |
| 18 | GO:0005524: ATP binding | 3.84E-04 |
| 19 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.32E-04 |
| 20 | GO:0015171: amino acid transmembrane transporter activity | 4.69E-04 |
| 21 | GO:0042299: lupeol synthase activity | 6.19E-04 |
| 22 | GO:0004108: citrate (Si)-synthase activity | 6.19E-04 |
| 23 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 6.19E-04 |
| 24 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 6.19E-04 |
| 25 | GO:0001653: peptide receptor activity | 6.19E-04 |
| 26 | GO:0016866: intramolecular transferase activity | 8.23E-04 |
| 27 | GO:0004470: malic enzyme activity | 8.23E-04 |
| 28 | GO:0004031: aldehyde oxidase activity | 8.23E-04 |
| 29 | GO:0050302: indole-3-acetaldehyde oxidase activity | 8.23E-04 |
| 30 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 8.23E-04 |
| 31 | GO:0015120: phosphoglycerate transmembrane transporter activity | 8.23E-04 |
| 32 | GO:0004737: pyruvate decarboxylase activity | 8.23E-04 |
| 33 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 8.23E-04 |
| 34 | GO:0000104: succinate dehydrogenase activity | 1.04E-03 |
| 35 | GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity | 1.04E-03 |
| 36 | GO:0015301: anion:anion antiporter activity | 1.04E-03 |
| 37 | GO:0005452: inorganic anion exchanger activity | 1.04E-03 |
| 38 | GO:0031593: polyubiquitin binding | 1.27E-03 |
| 39 | GO:0004556: alpha-amylase activity | 1.27E-03 |
| 40 | GO:0016462: pyrophosphatase activity | 1.27E-03 |
| 41 | GO:0030976: thiamine pyrophosphate binding | 1.27E-03 |
| 42 | GO:0031369: translation initiation factor binding | 1.27E-03 |
| 43 | GO:0004747: ribokinase activity | 1.52E-03 |
| 44 | GO:0003978: UDP-glucose 4-epimerase activity | 1.52E-03 |
| 45 | GO:0051020: GTPase binding | 1.52E-03 |
| 46 | GO:0051920: peroxiredoxin activity | 1.52E-03 |
| 47 | GO:0005096: GTPase activator activity | 1.73E-03 |
| 48 | GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity | 1.78E-03 |
| 49 | GO:0016831: carboxy-lyase activity | 1.78E-03 |
| 50 | GO:0004427: inorganic diphosphatase activity | 1.78E-03 |
| 51 | GO:0008865: fructokinase activity | 2.06E-03 |
| 52 | GO:0016209: antioxidant activity | 2.06E-03 |
| 53 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.37E-03 |
| 54 | GO:0004364: glutathione transferase activity | 2.57E-03 |
| 55 | GO:0008417: fucosyltransferase activity | 2.66E-03 |
| 56 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.89E-03 |
| 57 | GO:0051287: NAD binding | 3.23E-03 |
| 58 | GO:0008171: O-methyltransferase activity | 3.30E-03 |
| 59 | GO:0005507: copper ion binding | 3.46E-03 |
| 60 | GO:0046961: proton-transporting ATPase activity, rotational mechanism | 3.65E-03 |
| 61 | GO:0004129: cytochrome-c oxidase activity | 3.65E-03 |
| 62 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.36E-03 |
| 63 | GO:0005315: inorganic phosphate transmembrane transporter activity | 4.36E-03 |
| 64 | GO:0015114: phosphate ion transmembrane transporter activity | 4.36E-03 |
| 65 | GO:0005388: calcium-transporting ATPase activity | 4.36E-03 |
| 66 | GO:0009055: electron carrier activity | 5.15E-03 |
| 67 | GO:0005509: calcium ion binding | 5.22E-03 |
| 68 | GO:0051536: iron-sulfur cluster binding | 5.93E-03 |
| 69 | GO:0003954: NADH dehydrogenase activity | 5.93E-03 |
| 70 | GO:0003727: single-stranded RNA binding | 8.13E-03 |
| 71 | GO:0015297: antiporter activity | 8.40E-03 |
| 72 | GO:0005199: structural constituent of cell wall | 9.57E-03 |
| 73 | GO:0008536: Ran GTPase binding | 9.57E-03 |
| 74 | GO:0050662: coenzyme binding | 1.01E-02 |
| 75 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 1.11E-02 |
| 76 | GO:0005200: structural constituent of cytoskeleton | 1.33E-02 |
| 77 | GO:0000287: magnesium ion binding | 1.34E-02 |
| 78 | GO:0051213: dioxygenase activity | 1.44E-02 |
| 79 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.56E-02 |
| 80 | GO:0004683: calmodulin-dependent protein kinase activity | 1.62E-02 |
| 81 | GO:0015238: drug transmembrane transporter activity | 1.80E-02 |
| 82 | GO:0004222: metalloendopeptidase activity | 1.86E-02 |
| 83 | GO:0050897: cobalt ion binding | 1.93E-02 |
| 84 | GO:0030145: manganese ion binding | 1.93E-02 |
| 85 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.93E-02 |
| 86 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.06E-02 |
| 87 | GO:0003697: single-stranded DNA binding | 2.06E-02 |
| 88 | GO:0004674: protein serine/threonine kinase activity | 2.22E-02 |
| 89 | GO:0050661: NADP binding | 2.25E-02 |
| 90 | GO:0003924: GTPase activity | 2.51E-02 |
| 91 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 3.04E-02 |
| 92 | GO:0016301: kinase activity | 3.18E-02 |
| 93 | GO:0016491: oxidoreductase activity | 3.36E-02 |
| 94 | GO:0051082: unfolded protein binding | 3.91E-02 |
| 95 | GO:0015035: protein disulfide oxidoreductase activity | 3.99E-02 |
| 96 | GO:0016746: transferase activity, transferring acyl groups | 3.99E-02 |
| 97 | GO:0000166: nucleotide binding | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 6.75E-05 |
| 2 | GO:0031314: extrinsic component of mitochondrial inner membrane | 2.61E-04 |
| 3 | GO:0045254: pyruvate dehydrogenase complex | 2.61E-04 |
| 4 | GO:0045271: respiratory chain complex I | 4.13E-04 |
| 5 | GO:0009530: primary cell wall | 4.32E-04 |
| 6 | GO:0005751: mitochondrial respiratory chain complex IV | 4.32E-04 |
| 7 | GO:0005829: cytosol | 5.10E-04 |
| 8 | GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain | 1.04E-03 |
| 9 | GO:0005759: mitochondrial matrix | 1.13E-03 |
| 10 | GO:0016020: membrane | 1.91E-03 |
| 11 | GO:0045273: respiratory chain complex II | 2.06E-03 |
| 12 | GO:0008540: proteasome regulatory particle, base subcomplex | 2.97E-03 |
| 13 | GO:0031966: mitochondrial membrane | 3.35E-03 |
| 14 | GO:0005665: DNA-directed RNA polymerase II, core complex | 4.00E-03 |
| 15 | GO:0005886: plasma membrane | 4.03E-03 |
| 16 | GO:0005747: mitochondrial respiratory chain complex I | 4.38E-03 |
| 17 | GO:0005750: mitochondrial respiratory chain complex III | 4.74E-03 |
| 18 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.13E-03 |
| 19 | GO:0005794: Golgi apparatus | 6.12E-03 |
| 20 | GO:0005739: mitochondrion | 7.19E-03 |
| 21 | GO:0005737: cytoplasm | 1.24E-02 |
| 22 | GO:0032580: Golgi cisterna membrane | 1.27E-02 |
| 23 | GO:0005778: peroxisomal membrane | 1.33E-02 |
| 24 | GO:0000932: P-body | 1.44E-02 |
| 25 | GO:0031969: chloroplast membrane | 1.69E-02 |
| 26 | GO:0005643: nuclear pore | 1.74E-02 |
| 27 | GO:0005743: mitochondrial inner membrane | 2.33E-02 |
| 28 | GO:0016021: integral component of membrane | 2.49E-02 |
| 29 | GO:0005856: cytoskeleton | 2.67E-02 |
| 30 | GO:0000502: proteasome complex | 3.04E-02 |
| 31 | GO:0009536: plastid | 3.07E-02 |
| 32 | GO:0005774: vacuolar membrane | 3.77E-02 |
| 33 | GO:0009706: chloroplast inner membrane | 3.91E-02 |
| 34 | GO:0048046: apoplast | 4.04E-02 |
| 35 | GO:0005618: cell wall | 4.57E-02 |