GO Enrichment Analysis of Co-expressed Genes with
AT2G38780
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 4.16E-05 |
| 4 | GO:0010028: xanthophyll cycle | 4.18E-05 |
| 5 | GO:1900871: chloroplast mRNA modification | 1.04E-04 |
| 6 | GO:0016122: xanthophyll metabolic process | 1.04E-04 |
| 7 | GO:0008152: metabolic process | 1.22E-04 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.63E-04 |
| 9 | GO:0045727: positive regulation of translation | 3.53E-04 |
| 10 | GO:0015994: chlorophyll metabolic process | 3.53E-04 |
| 11 | GO:0006461: protein complex assembly | 4.50E-04 |
| 12 | GO:0042549: photosystem II stabilization | 5.51E-04 |
| 13 | GO:0009854: oxidative photosynthetic carbon pathway | 6.58E-04 |
| 14 | GO:0015979: photosynthesis | 6.66E-04 |
| 15 | GO:0010196: nonphotochemical quenching | 7.69E-04 |
| 16 | GO:1900057: positive regulation of leaf senescence | 7.69E-04 |
| 17 | GO:0009645: response to low light intensity stimulus | 7.69E-04 |
| 18 | GO:0030091: protein repair | 8.84E-04 |
| 19 | GO:0010492: maintenance of shoot apical meristem identity | 8.84E-04 |
| 20 | GO:0009657: plastid organization | 1.00E-03 |
| 21 | GO:0032544: plastid translation | 1.00E-03 |
| 22 | GO:0071482: cellular response to light stimulus | 1.00E-03 |
| 23 | GO:0006364: rRNA processing | 1.01E-03 |
| 24 | GO:0048507: meristem development | 1.13E-03 |
| 25 | GO:0098656: anion transmembrane transport | 1.13E-03 |
| 26 | GO:0005983: starch catabolic process | 1.67E-03 |
| 27 | GO:0018107: peptidyl-threonine phosphorylation | 1.82E-03 |
| 28 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.82E-03 |
| 29 | GO:0009767: photosynthetic electron transport chain | 1.82E-03 |
| 30 | GO:0010207: photosystem II assembly | 1.97E-03 |
| 31 | GO:0016575: histone deacetylation | 2.62E-03 |
| 32 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.62E-03 |
| 33 | GO:0042631: cellular response to water deprivation | 3.71E-03 |
| 34 | GO:0015995: chlorophyll biosynthetic process | 6.50E-03 |
| 35 | GO:0032259: methylation | 6.50E-03 |
| 36 | GO:0055114: oxidation-reduction process | 6.72E-03 |
| 37 | GO:0009817: defense response to fungus, incompatible interaction | 6.98E-03 |
| 38 | GO:0018298: protein-chromophore linkage | 6.98E-03 |
| 39 | GO:0006810: transport | 7.40E-03 |
| 40 | GO:0006865: amino acid transport | 7.97E-03 |
| 41 | GO:0009853: photorespiration | 8.23E-03 |
| 42 | GO:0006631: fatty acid metabolic process | 9.28E-03 |
| 43 | GO:0009644: response to high light intensity | 1.04E-02 |
| 44 | GO:0009735: response to cytokinin | 1.10E-02 |
| 45 | GO:0045893: positive regulation of transcription, DNA-templated | 1.39E-02 |
| 46 | GO:0018105: peptidyl-serine phosphorylation | 1.59E-02 |
| 47 | GO:0006979: response to oxidative stress | 2.47E-02 |
| 48 | GO:0006470: protein dephosphorylation | 2.52E-02 |
| 49 | GO:0009658: chloroplast organization | 3.13E-02 |
| 50 | GO:0042254: ribosome biogenesis | 3.17E-02 |
| 51 | GO:0009409: response to cold | 3.32E-02 |
| 52 | GO:0045454: cell redox homeostasis | 4.15E-02 |
| 53 | GO:0016042: lipid catabolic process | 4.71E-02 |
| 54 | GO:0009408: response to heat | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 5 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 6 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 7 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 8 | GO:0050308: sugar-phosphatase activity | 4.18E-05 |
| 9 | GO:0019203: carbohydrate phosphatase activity | 4.18E-05 |
| 10 | GO:0008266: poly(U) RNA binding | 6.58E-05 |
| 11 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.04E-04 |
| 12 | GO:0019201: nucleotide kinase activity | 2.63E-04 |
| 13 | GO:0048487: beta-tubulin binding | 2.63E-04 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.53E-04 |
| 15 | GO:2001070: starch binding | 5.51E-04 |
| 16 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 6.58E-04 |
| 17 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 6.58E-04 |
| 18 | GO:0004017: adenylate kinase activity | 6.58E-04 |
| 19 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.00E-03 |
| 20 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.13E-03 |
| 21 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.82E-03 |
| 22 | GO:0031409: pigment binding | 2.29E-03 |
| 23 | GO:0005528: FK506 binding | 2.46E-03 |
| 24 | GO:0004407: histone deacetylase activity | 2.46E-03 |
| 25 | GO:0016787: hydrolase activity | 2.54E-03 |
| 26 | GO:0042802: identical protein binding | 3.07E-03 |
| 27 | GO:0008168: methyltransferase activity | 3.59E-03 |
| 28 | GO:0050662: coenzyme binding | 4.11E-03 |
| 29 | GO:0048038: quinone binding | 4.51E-03 |
| 30 | GO:0016168: chlorophyll binding | 6.04E-03 |
| 31 | GO:0043621: protein self-association | 1.04E-02 |
| 32 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.09E-02 |
| 33 | GO:0051287: NAD binding | 1.12E-02 |
| 34 | GO:0015171: amino acid transmembrane transporter activity | 1.30E-02 |
| 35 | GO:0016874: ligase activity | 1.49E-02 |
| 36 | GO:0019843: rRNA binding | 1.82E-02 |
| 37 | GO:0003743: translation initiation factor activity | 2.56E-02 |
| 38 | GO:0003824: catalytic activity | 2.69E-02 |
| 39 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.72E-02 |
| 40 | GO:0016788: hydrolase activity, acting on ester bonds | 3.17E-02 |
| 41 | GO:0016491: oxidoreductase activity | 3.23E-02 |
| 42 | GO:0004672: protein kinase activity | 3.60E-02 |
| 43 | GO:0052689: carboxylic ester hydrolase activity | 3.92E-02 |
| 44 | GO:0042803: protein homodimerization activity | 4.29E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.50E-27 |
| 2 | GO:0009534: chloroplast thylakoid | 1.25E-13 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.17E-09 |
| 4 | GO:0009941: chloroplast envelope | 7.54E-09 |
| 5 | GO:0009570: chloroplast stroma | 4.12E-08 |
| 6 | GO:0030095: chloroplast photosystem II | 7.12E-07 |
| 7 | GO:0009579: thylakoid | 2.56E-06 |
| 8 | GO:0010287: plastoglobule | 6.30E-06 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 7.06E-06 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.33E-05 |
| 11 | GO:0009782: photosystem I antenna complex | 4.18E-05 |
| 12 | GO:0009344: nitrite reductase complex [NAD(P)H] | 4.18E-05 |
| 13 | GO:0031977: thylakoid lumen | 7.08E-04 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 7.69E-04 |
| 15 | GO:0008180: COP9 signalosome | 1.13E-03 |
| 16 | GO:0030076: light-harvesting complex | 2.13E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 2.62E-03 |
| 18 | GO:0042651: thylakoid membrane | 2.62E-03 |
| 19 | GO:0009523: photosystem II | 4.31E-03 |
| 20 | GO:0019898: extrinsic component of membrane | 4.31E-03 |
| 21 | GO:0019005: SCF ubiquitin ligase complex | 6.98E-03 |
| 22 | GO:0000502: proteasome complex | 1.21E-02 |
| 23 | GO:0009706: chloroplast inner membrane | 1.55E-02 |
| 24 | GO:0048046: apoplast | 2.33E-02 |
| 25 | GO:0031969: chloroplast membrane | 3.65E-02 |