GO Enrichment Analysis of Co-expressed Genes with
AT2G38700
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 2 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0010480: microsporocyte differentiation | 5.64E-05 |
| 6 | GO:0045717: negative regulation of fatty acid biosynthetic process | 1.37E-04 |
| 7 | GO:0010289: homogalacturonan biosynthetic process | 1.37E-04 |
| 8 | GO:0007010: cytoskeleton organization | 1.46E-04 |
| 9 | GO:0051639: actin filament network formation | 3.41E-04 |
| 10 | GO:0042989: sequestering of actin monomers | 3.41E-04 |
| 11 | GO:0031122: cytoplasmic microtubule organization | 4.56E-04 |
| 12 | GO:0010021: amylopectin biosynthetic process | 4.56E-04 |
| 13 | GO:0051764: actin crosslink formation | 4.56E-04 |
| 14 | GO:0000304: response to singlet oxygen | 5.78E-04 |
| 15 | GO:0030041: actin filament polymerization | 5.78E-04 |
| 16 | GO:0048497: maintenance of floral organ identity | 5.78E-04 |
| 17 | GO:0015995: chlorophyll biosynthetic process | 6.28E-04 |
| 18 | GO:0009913: epidermal cell differentiation | 7.07E-04 |
| 19 | GO:0042549: photosystem II stabilization | 7.07E-04 |
| 20 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.07E-04 |
| 21 | GO:0051510: regulation of unidimensional cell growth | 9.85E-04 |
| 22 | GO:0048437: floral organ development | 9.85E-04 |
| 23 | GO:0000105: histidine biosynthetic process | 1.13E-03 |
| 24 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.62E-03 |
| 25 | GO:0045036: protein targeting to chloroplast | 1.79E-03 |
| 26 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.79E-03 |
| 27 | GO:0019538: protein metabolic process | 1.79E-03 |
| 28 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.97E-03 |
| 29 | GO:0048229: gametophyte development | 1.97E-03 |
| 30 | GO:0046856: phosphatidylinositol dephosphorylation | 1.97E-03 |
| 31 | GO:0012501: programmed cell death | 2.16E-03 |
| 32 | GO:0005983: starch catabolic process | 2.16E-03 |
| 33 | GO:0010075: regulation of meristem growth | 2.36E-03 |
| 34 | GO:0010102: lateral root morphogenesis | 2.36E-03 |
| 35 | GO:0009934: regulation of meristem structural organization | 2.56E-03 |
| 36 | GO:0090351: seedling development | 2.76E-03 |
| 37 | GO:0009845: seed germination | 2.79E-03 |
| 38 | GO:0051017: actin filament bundle assembly | 3.18E-03 |
| 39 | GO:0008299: isoprenoid biosynthetic process | 3.40E-03 |
| 40 | GO:0031408: oxylipin biosynthetic process | 3.63E-03 |
| 41 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.86E-03 |
| 42 | GO:0009739: response to gibberellin | 3.96E-03 |
| 43 | GO:0048653: anther development | 4.83E-03 |
| 44 | GO:0048825: cotyledon development | 5.61E-03 |
| 45 | GO:0019252: starch biosynthetic process | 5.61E-03 |
| 46 | GO:0009791: post-embryonic development | 5.61E-03 |
| 47 | GO:1901657: glycosyl compound metabolic process | 6.43E-03 |
| 48 | GO:0030163: protein catabolic process | 6.43E-03 |
| 49 | GO:0071805: potassium ion transmembrane transport | 7.00E-03 |
| 50 | GO:0046777: protein autophosphorylation | 7.24E-03 |
| 51 | GO:0009816: defense response to bacterium, incompatible interaction | 7.89E-03 |
| 52 | GO:0018298: protein-chromophore linkage | 9.13E-03 |
| 53 | GO:0016042: lipid catabolic process | 9.72E-03 |
| 54 | GO:0006811: ion transport | 9.78E-03 |
| 55 | GO:0048527: lateral root development | 1.01E-02 |
| 56 | GO:0016051: carbohydrate biosynthetic process | 1.08E-02 |
| 57 | GO:0006839: mitochondrial transport | 1.18E-02 |
| 58 | GO:0046686: response to cadmium ion | 1.31E-02 |
| 59 | GO:0031347: regulation of defense response | 1.48E-02 |
| 60 | GO:0006364: rRNA processing | 1.59E-02 |
| 61 | GO:0006813: potassium ion transport | 1.59E-02 |
| 62 | GO:0035556: intracellular signal transduction | 1.88E-02 |
| 63 | GO:0018105: peptidyl-serine phosphorylation | 2.09E-02 |
| 64 | GO:0006633: fatty acid biosynthetic process | 2.82E-02 |
| 65 | GO:0007623: circadian rhythm | 3.02E-02 |
| 66 | GO:0010228: vegetative to reproductive phase transition of meristem | 3.12E-02 |
| 67 | GO:0006468: protein phosphorylation | 3.17E-02 |
| 68 | GO:0006470: protein dephosphorylation | 3.32E-02 |
| 69 | GO:0010468: regulation of gene expression | 3.42E-02 |
| 70 | GO:0009733: response to auxin | 4.04E-02 |
| 71 | GO:0009658: chloroplast organization | 4.12E-02 |
| 72 | GO:0042254: ribosome biogenesis | 4.17E-02 |
| 73 | GO:0009723: response to ethylene | 4.57E-02 |
| 74 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 3 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 4 | GO:0008568: microtubule-severing ATPase activity | 5.64E-05 |
| 5 | GO:0019203: carbohydrate phosphatase activity | 5.64E-05 |
| 6 | GO:0003879: ATP phosphoribosyltransferase activity | 5.64E-05 |
| 7 | GO:0030941: chloroplast targeting sequence binding | 5.64E-05 |
| 8 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 5.64E-05 |
| 9 | GO:0050308: sugar-phosphatase activity | 5.64E-05 |
| 10 | GO:0033201: alpha-1,4-glucan synthase activity | 1.37E-04 |
| 11 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.37E-04 |
| 12 | GO:0003779: actin binding | 1.88E-04 |
| 13 | GO:0030267: glyoxylate reductase (NADP) activity | 2.34E-04 |
| 14 | GO:0070402: NADPH binding | 2.34E-04 |
| 15 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 2.34E-04 |
| 16 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 2.34E-04 |
| 17 | GO:0004373: glycogen (starch) synthase activity | 2.34E-04 |
| 18 | GO:0003913: DNA photolyase activity | 2.34E-04 |
| 19 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 3.41E-04 |
| 20 | GO:0009011: starch synthase activity | 4.56E-04 |
| 21 | GO:0051861: glycolipid binding | 4.56E-04 |
| 22 | GO:0003785: actin monomer binding | 5.78E-04 |
| 23 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 7.07E-04 |
| 24 | GO:2001070: starch binding | 7.07E-04 |
| 25 | GO:0042578: phosphoric ester hydrolase activity | 7.07E-04 |
| 26 | GO:0016788: hydrolase activity, acting on ester bonds | 7.19E-04 |
| 27 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 8.44E-04 |
| 28 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 8.44E-04 |
| 29 | GO:0015631: tubulin binding | 8.44E-04 |
| 30 | GO:0005516: calmodulin binding | 9.34E-04 |
| 31 | GO:0009881: photoreceptor activity | 9.85E-04 |
| 32 | GO:0043022: ribosome binding | 1.13E-03 |
| 33 | GO:0004033: aldo-keto reductase (NADP) activity | 1.13E-03 |
| 34 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 1.45E-03 |
| 35 | GO:0047617: acyl-CoA hydrolase activity | 1.62E-03 |
| 36 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 2.16E-03 |
| 37 | GO:0004190: aspartic-type endopeptidase activity | 2.76E-03 |
| 38 | GO:0003714: transcription corepressor activity | 3.18E-03 |
| 39 | GO:0015079: potassium ion transmembrane transporter activity | 3.40E-03 |
| 40 | GO:0033612: receptor serine/threonine kinase binding | 3.63E-03 |
| 41 | GO:0004707: MAP kinase activity | 3.63E-03 |
| 42 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 3.86E-03 |
| 43 | GO:0016301: kinase activity | 4.40E-03 |
| 44 | GO:0016853: isomerase activity | 5.35E-03 |
| 45 | GO:0051015: actin filament binding | 6.43E-03 |
| 46 | GO:0052689: carboxylic ester hydrolase activity | 7.49E-03 |
| 47 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 8.19E-03 |
| 48 | GO:0004683: calmodulin-dependent protein kinase activity | 8.50E-03 |
| 49 | GO:0102483: scopolin beta-glucosidase activity | 8.50E-03 |
| 50 | GO:0030145: manganese ion binding | 1.01E-02 |
| 51 | GO:0008422: beta-glucosidase activity | 1.15E-02 |
| 52 | GO:0004674: protein serine/threonine kinase activity | 1.63E-02 |
| 53 | GO:0016787: hydrolase activity | 1.96E-02 |
| 54 | GO:0030246: carbohydrate binding | 2.40E-02 |
| 55 | GO:0005524: ATP binding | 2.60E-02 |
| 56 | GO:0008017: microtubule binding | 3.12E-02 |
| 57 | GO:0000287: magnesium ion binding | 4.06E-02 |
| 58 | GO:0008233: peptidase activity | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.91E-09 |
| 2 | GO:0009570: chloroplast stroma | 1.31E-04 |
| 3 | GO:0010287: plastoglobule | 2.48E-04 |
| 4 | GO:0032432: actin filament bundle | 3.41E-04 |
| 5 | GO:0031359: integral component of chloroplast outer membrane | 9.85E-04 |
| 6 | GO:0009501: amyloplast | 1.13E-03 |
| 7 | GO:0005886: plasma membrane | 1.96E-03 |
| 8 | GO:0005884: actin filament | 1.97E-03 |
| 9 | GO:0005938: cell cortex | 2.36E-03 |
| 10 | GO:0043234: protein complex | 2.97E-03 |
| 11 | GO:0009534: chloroplast thylakoid | 3.87E-03 |
| 12 | GO:0015629: actin cytoskeleton | 4.10E-03 |
| 13 | GO:0031969: chloroplast membrane | 6.77E-03 |
| 14 | GO:0009707: chloroplast outer membrane | 9.13E-03 |
| 15 | GO:0009941: chloroplast envelope | 1.52E-02 |
| 16 | GO:0009535: chloroplast thylakoid membrane | 2.07E-02 |
| 17 | GO:0009579: thylakoid | 2.13E-02 |
| 18 | GO:0005874: microtubule | 4.68E-02 |
| 19 | GO:0000139: Golgi membrane | 4.86E-02 |