Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G37640

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process0.00E+00
2GO:0007638: mechanosensory behavior0.00E+00
3GO:0006114: glycerol biosynthetic process0.00E+00
4GO:0046322: negative regulation of fatty acid oxidation0.00E+00
5GO:0042425: choline biosynthetic process0.00E+00
6GO:0042493: response to drug0.00E+00
7GO:1905499: trichome papilla formation0.00E+00
8GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
9GO:0071555: cell wall organization3.08E-11
10GO:0042546: cell wall biogenesis9.19E-07
11GO:0010411: xyloglucan metabolic process3.51E-06
12GO:0010306: rhamnogalacturonan II biosynthetic process2.94E-05
13GO:0007017: microtubule-based process1.12E-04
14GO:0016998: cell wall macromolecule catabolic process1.29E-04
15GO:0007155: cell adhesion2.76E-04
16GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway2.82E-04
17GO:0019510: S-adenosylhomocysteine catabolic process2.82E-04
18GO:0060627: regulation of vesicle-mediated transport2.82E-04
19GO:0005980: glycogen catabolic process2.82E-04
20GO:0000032: cell wall mannoprotein biosynthetic process2.82E-04
21GO:0032025: response to cobalt ion2.82E-04
22GO:0042759: long-chain fatty acid biosynthetic process2.82E-04
23GO:0016042: lipid catabolic process3.17E-04
24GO:0005975: carbohydrate metabolic process3.23E-04
25GO:0010289: homogalacturonan biosynthetic process6.19E-04
26GO:0043039: tRNA aminoacylation6.19E-04
27GO:0010198: synergid death6.19E-04
28GO:0033353: S-adenosylmethionine cycle6.19E-04
29GO:0045717: negative regulation of fatty acid biosynthetic process6.19E-04
30GO:0071258: cellular response to gravity6.19E-04
31GO:0090506: axillary shoot meristem initiation1.00E-03
32GO:0033591: response to L-ascorbic acid1.00E-03
33GO:0046168: glycerol-3-phosphate catabolic process1.00E-03
34GO:1901562: response to paraquat1.00E-03
35GO:0006696: ergosterol biosynthetic process1.00E-03
36GO:0006065: UDP-glucuronate biosynthetic process1.00E-03
37GO:0016051: carbohydrate biosynthetic process1.05E-03
38GO:0006633: fatty acid biosynthetic process1.10E-03
39GO:0010025: wax biosynthetic process1.18E-03
40GO:0045490: pectin catabolic process1.27E-03
41GO:0051017: actin filament bundle assembly1.30E-03
42GO:0051639: actin filament network formation1.44E-03
43GO:0006072: glycerol-3-phosphate metabolic process1.44E-03
44GO:0051016: barbed-end actin filament capping1.44E-03
45GO:0009650: UV protection1.44E-03
46GO:0050482: arachidonic acid secretion1.44E-03
47GO:0009413: response to flooding1.44E-03
48GO:0009298: GDP-mannose biosynthetic process1.44E-03
49GO:0010371: regulation of gibberellin biosynthetic process1.44E-03
50GO:0045338: farnesyl diphosphate metabolic process1.44E-03
51GO:0007231: osmosensory signaling pathway1.44E-03
52GO:0030245: cellulose catabolic process1.72E-03
53GO:0051764: actin crosslink formation1.92E-03
54GO:0006183: GTP biosynthetic process1.92E-03
55GO:0033500: carbohydrate homeostasis1.92E-03
56GO:0031122: cytoplasmic microtubule organization1.92E-03
57GO:0008295: spermidine biosynthetic process1.92E-03
58GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway1.92E-03
59GO:0009956: radial pattern formation1.92E-03
60GO:0009826: unidimensional cell growth2.33E-03
61GO:0042335: cuticle development2.39E-03
62GO:0006665: sphingolipid metabolic process2.46E-03
63GO:0000304: response to singlet oxygen2.46E-03
64GO:0048359: mucilage metabolic process involved in seed coat development2.46E-03
65GO:0006656: phosphatidylcholine biosynthetic process2.46E-03
66GO:0045487: gibberellin catabolic process2.46E-03
67GO:0048868: pollen tube development2.58E-03
68GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway3.03E-03
69GO:0006796: phosphate-containing compound metabolic process3.03E-03
70GO:0006014: D-ribose metabolic process3.03E-03
71GO:0071554: cell wall organization or biogenesis3.18E-03
72GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.61E-03
73GO:0010067: procambium histogenesis3.65E-03
74GO:2000033: regulation of seed dormancy process3.65E-03
75GO:0009612: response to mechanical stimulus3.65E-03
76GO:0009082: branched-chain amino acid biosynthetic process3.65E-03
77GO:0009099: valine biosynthetic process3.65E-03
78GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity3.65E-03
79GO:0009828: plant-type cell wall loosening3.85E-03
80GO:0006955: immune response4.30E-03
81GO:0048528: post-embryonic root development4.30E-03
82GO:0009645: response to low light intensity stimulus4.30E-03
83GO:0016126: sterol biosynthetic process4.59E-03
84GO:0006644: phospholipid metabolic process4.99E-03
85GO:0045010: actin nucleation4.99E-03
86GO:0016559: peroxisome fission4.99E-03
87GO:0006869: lipid transport5.18E-03
88GO:0009097: isoleucine biosynthetic process5.72E-03
89GO:0006754: ATP biosynthetic process6.48E-03
90GO:0015780: nucleotide-sugar transport6.48E-03
91GO:0007568: aging6.92E-03
92GO:0009098: leucine biosynthetic process7.28E-03
93GO:0042761: very long-chain fatty acid biosynthetic process7.28E-03
94GO:0016573: histone acetylation7.28E-03
95GO:0010162: seed dormancy process8.11E-03
96GO:0019538: protein metabolic process8.11E-03
97GO:0006949: syncytium formation8.11E-03
98GO:0046856: phosphatidylinositol dephosphorylation8.97E-03
99GO:0010015: root morphogenesis8.97E-03
100GO:0006816: calcium ion transport8.97E-03
101GO:0030036: actin cytoskeleton organization1.08E-02
102GO:0010020: chloroplast fission1.18E-02
103GO:0009933: meristem structural organization1.18E-02
104GO:0010223: secondary shoot formation1.18E-02
105GO:0009266: response to temperature stimulus1.18E-02
106GO:0042538: hyperosmotic salinity response1.23E-02
107GO:0009664: plant-type cell wall organization1.23E-02
108GO:0009860: pollen tube growth1.27E-02
109GO:0070588: calcium ion transmembrane transport1.28E-02
110GO:0009833: plant-type primary cell wall biogenesis1.38E-02
111GO:0006833: water transport1.38E-02
112GO:0006338: chromatin remodeling1.48E-02
113GO:0019953: sexual reproduction1.59E-02
114GO:0006418: tRNA aminoacylation for protein translation1.59E-02
115GO:0043622: cortical microtubule organization1.59E-02
116GO:0031408: oxylipin biosynthetic process1.70E-02
117GO:0010431: seed maturation1.70E-02
118GO:0006730: one-carbon metabolic process1.81E-02
119GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.93E-02
120GO:0009294: DNA mediated transformation1.93E-02
121GO:0009411: response to UV1.93E-02
122GO:0001944: vasculature development1.93E-02
123GO:0019722: calcium-mediated signaling2.05E-02
124GO:0010091: trichome branching2.05E-02
125GO:0010089: xylem development2.05E-02
126GO:0016117: carotenoid biosynthetic process2.17E-02
127GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.17E-02
128GO:0000226: microtubule cytoskeleton organization2.29E-02
129GO:0034220: ion transmembrane transport2.29E-02
130GO:0010087: phloem or xylem histogenesis2.29E-02
131GO:0045489: pectin biosynthetic process2.42E-02
132GO:0010305: leaf vascular tissue pattern formation2.42E-02
133GO:0010182: sugar mediated signaling pathway2.42E-02
134GO:0006629: lipid metabolic process2.48E-02
135GO:0010183: pollen tube guidance2.67E-02
136GO:0019252: starch biosynthetic process2.67E-02
137GO:0010583: response to cyclopentenone2.94E-02
138GO:0010090: trichome morphogenesis3.08E-02
139GO:0016125: sterol metabolic process3.22E-02
140GO:0007623: circadian rhythm3.27E-02
141GO:0007267: cell-cell signaling3.36E-02
142GO:0042128: nitrate assimilation3.95E-02
143GO:0009414: response to water deprivation4.03E-02
144GO:0015995: chlorophyll biosynthetic process4.10E-02
145GO:0016311: dephosphorylation4.25E-02
146GO:0016049: cell growth4.25E-02
147GO:0009817: defense response to fungus, incompatible interaction4.41E-02
148GO:0030244: cellulose biosynthetic process4.41E-02
149GO:0006468: protein phosphorylation4.49E-02
150GO:0009832: plant-type cell wall biogenesis4.56E-02
151GO:0009407: toxin catabolic process4.72E-02
152GO:0007165: signal transduction4.73E-02
153GO:0009738: abscisic acid-activated signaling pathway4.82E-02
154GO:0010043: response to zinc ion4.88E-02
RankGO TermAdjusted P value
1GO:0043136: glycerol-3-phosphatase activity0.00E+00
2GO:0000121: glycerol-1-phosphatase activity0.00E+00
3GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
4GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
5GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity0.00E+00
6GO:0004496: mevalonate kinase activity0.00E+00
7GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
8GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
10GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
11GO:0016762: xyloglucan:xyloglucosyl transferase activity8.30E-07
12GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds2.84E-06
13GO:0016798: hydrolase activity, acting on glycosyl bonds3.51E-06
14GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity3.65E-06
15GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity2.94E-05
16GO:0030570: pectate lyase activity1.67E-04
17GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.82E-04
18GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity2.82E-04
19GO:0005227: calcium activated cation channel activity2.82E-04
20GO:0008252: nucleotidase activity2.82E-04
21GO:0004013: adenosylhomocysteinase activity2.82E-04
22GO:0008184: glycogen phosphorylase activity2.82E-04
23GO:0042834: peptidoglycan binding2.82E-04
24GO:0004831: tyrosine-tRNA ligase activity2.82E-04
25GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity2.82E-04
26GO:0008568: microtubule-severing ATPase activity2.82E-04
27GO:0004645: phosphorylase activity2.82E-04
28GO:0004476: mannose-6-phosphate isomerase activity2.82E-04
29GO:0003924: GTPase activity3.37E-04
30GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors4.10E-04
31GO:0051015: actin filament binding4.10E-04
32GO:0005200: structural constituent of cytoskeleton4.81E-04
33GO:0003938: IMP dehydrogenase activity6.19E-04
34GO:0004766: spermidine synthase activity6.19E-04
35GO:0048531: beta-1,3-galactosyltransferase activity6.19E-04
36GO:0004310: farnesyl-diphosphate farnesyltransferase activity6.19E-04
37GO:0000234: phosphoethanolamine N-methyltransferase activity6.19E-04
38GO:0016787: hydrolase activity8.13E-04
39GO:0004565: beta-galactosidase activity8.46E-04
40GO:0052689: carboxylic ester hydrolase activity8.93E-04
41GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.00E-03
42GO:0003979: UDP-glucose 6-dehydrogenase activity1.00E-03
43GO:0001872: (1->3)-beta-D-glucan binding1.44E-03
44GO:0004445: inositol-polyphosphate 5-phosphatase activity1.44E-03
45GO:0052656: L-isoleucine transaminase activity1.44E-03
46GO:0052654: L-leucine transaminase activity1.44E-03
47GO:0052655: L-valine transaminase activity1.44E-03
48GO:0051287: NAD binding1.83E-03
49GO:0008810: cellulase activity1.88E-03
50GO:0016836: hydro-lyase activity1.92E-03
51GO:0052793: pectin acetylesterase activity1.92E-03
52GO:0004084: branched-chain-amino-acid transaminase activity1.92E-03
53GO:0009922: fatty acid elongase activity2.46E-03
54GO:0004623: phospholipase A2 activity2.46E-03
55GO:0005525: GTP binding2.88E-03
56GO:0019901: protein kinase binding2.97E-03
57GO:0004629: phospholipase C activity3.03E-03
58GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity3.03E-03
59GO:0004747: ribokinase activity3.65E-03
60GO:0051753: mannan synthase activity3.65E-03
61GO:0004435: phosphatidylinositol phospholipase C activity3.65E-03
62GO:0016759: cellulose synthase activity3.85E-03
63GO:0004427: inorganic diphosphatase activity4.30E-03
64GO:0043295: glutathione binding4.30E-03
65GO:0016413: O-acetyltransferase activity4.33E-03
66GO:0004871: signal transducer activity4.83E-03
67GO:0052747: sinapyl alcohol dehydrogenase activity4.99E-03
68GO:0008865: fructokinase activity4.99E-03
69GO:0004714: transmembrane receptor protein tyrosine kinase activity4.99E-03
70GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism6.48E-03
71GO:0015020: glucuronosyltransferase activity8.11E-03
72GO:0005516: calmodulin binding8.28E-03
73GO:0047372: acylglycerol lipase activity8.97E-03
74GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity9.88E-03
75GO:0045551: cinnamyl-alcohol dehydrogenase activity9.88E-03
76GO:0008289: lipid binding1.02E-02
77GO:0005262: calcium channel activity1.08E-02
78GO:0016788: hydrolase activity, acting on ester bonds1.18E-02
79GO:0004857: enzyme inhibitor activity1.48E-02
80GO:0005528: FK506 binding1.48E-02
81GO:0045735: nutrient reservoir activity1.57E-02
82GO:0004674: protein serine/threonine kinase activity1.67E-02
83GO:0033612: receptor serine/threonine kinase binding1.70E-02
84GO:0030599: pectinesterase activity1.78E-02
85GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity1.81E-02
86GO:0016757: transferase activity, transferring glycosyl groups1.83E-02
87GO:0016760: cellulose synthase (UDP-forming) activity1.93E-02
88GO:0008514: organic anion transmembrane transporter activity2.05E-02
89GO:0005102: receptor binding2.17E-02
90GO:0004812: aminoacyl-tRNA ligase activity2.17E-02
91GO:0003713: transcription coactivator activity2.42E-02
92GO:0016829: lyase activity2.56E-02
93GO:0016722: oxidoreductase activity, oxidizing metal ions3.36E-02
94GO:0008017: microtubule binding3.42E-02
95GO:0015250: water channel activity3.65E-02
96GO:0008375: acetylglucosaminyltransferase activity3.95E-02
97GO:0030247: polysaccharide binding4.10E-02
98GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.25E-02
99GO:0004693: cyclin-dependent protein serine/threonine kinase activity4.72E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0005618: cell wall3.53E-13
3GO:0005886: plasma membrane7.24E-10
4GO:0048046: apoplast5.67E-09
5GO:0031225: anchored component of membrane7.32E-07
6GO:0005576: extracellular region4.55E-06
7GO:0046658: anchored component of plasma membrane5.75E-06
8GO:0009505: plant-type cell wall1.85E-04
9GO:0009923: fatty acid elongase complex2.82E-04
10GO:0045298: tubulin complex4.10E-04
11GO:0009506: plasmodesma7.55E-04
12GO:0010330: cellulose synthase complex1.00E-03
13GO:0005875: microtubule associated complex1.18E-03
14GO:0032432: actin filament bundle1.44E-03
15GO:0009331: glycerol-3-phosphate dehydrogenase complex1.44E-03
16GO:0015630: microtubule cytoskeleton1.44E-03
17GO:0016020: membrane2.42E-03
18GO:0005874: microtubule3.25E-03
19GO:0010005: cortical microtubule, transverse to long axis3.65E-03
20GO:0000123: histone acetyltransferase complex4.30E-03
21GO:0005794: Golgi apparatus4.78E-03
22GO:0009534: chloroplast thylakoid5.65E-03
23GO:0000139: Golgi membrane7.85E-03
24GO:0005884: actin filament8.97E-03
25GO:0031977: thylakoid lumen9.03E-03
26GO:0005578: proteinaceous extracellular matrix1.08E-02
27GO:0005768: endosome1.16E-02
28GO:0043234: protein complex1.38E-02
29GO:0009570: chloroplast stroma1.39E-02
30GO:0031410: cytoplasmic vesicle1.81E-02
31GO:0015629: actin cytoskeleton1.93E-02
32GO:0009543: chloroplast thylakoid lumen2.37E-02
33GO:0005802: trans-Golgi network2.97E-02
34GO:0005887: integral component of plasma membrane3.62E-02
35GO:0009707: chloroplast outer membrane4.41E-02
36GO:0000151: ubiquitin ligase complex4.41E-02
37GO:0005773: vacuole4.50E-02
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Gene type



Gene DE type