GO Enrichment Analysis of Co-expressed Genes with
AT2G37620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 5 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 6 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 7 | GO:0006223: uracil salvage | 0.00E+00 |
| 8 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 9 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 10 | GO:0009658: chloroplast organization | 2.78E-08 |
| 11 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.50E-07 |
| 12 | GO:0008616: queuosine biosynthetic process | 1.19E-06 |
| 13 | GO:0006353: DNA-templated transcription, termination | 1.55E-06 |
| 14 | GO:0032544: plastid translation | 2.29E-06 |
| 15 | GO:0032502: developmental process | 4.64E-06 |
| 16 | GO:0016024: CDP-diacylglycerol biosynthetic process | 9.76E-06 |
| 17 | GO:0015995: chlorophyll biosynthetic process | 1.27E-05 |
| 18 | GO:0006633: fatty acid biosynthetic process | 3.03E-05 |
| 19 | GO:0016123: xanthophyll biosynthetic process | 3.14E-05 |
| 20 | GO:0016998: cell wall macromolecule catabolic process | 3.62E-05 |
| 21 | GO:0016117: carotenoid biosynthetic process | 6.22E-05 |
| 22 | GO:0048564: photosystem I assembly | 1.13E-04 |
| 23 | GO:0042255: ribosome assembly | 1.13E-04 |
| 24 | GO:0006434: seryl-tRNA aminoacylation | 1.56E-04 |
| 25 | GO:0009443: pyridoxal 5'-phosphate salvage | 1.56E-04 |
| 26 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 1.56E-04 |
| 27 | GO:0042371: vitamin K biosynthetic process | 1.56E-04 |
| 28 | GO:0010411: xyloglucan metabolic process | 2.31E-04 |
| 29 | GO:0007000: nucleolus organization | 3.55E-04 |
| 30 | GO:0043039: tRNA aminoacylation | 3.55E-04 |
| 31 | GO:0045717: negative regulation of fatty acid biosynthetic process | 3.55E-04 |
| 32 | GO:0018026: peptidyl-lysine monomethylation | 3.55E-04 |
| 33 | GO:0009767: photosynthetic electron transport chain | 3.74E-04 |
| 34 | GO:0010020: chloroplast fission | 4.23E-04 |
| 35 | GO:0042546: cell wall biogenesis | 5.31E-04 |
| 36 | GO:0010581: regulation of starch biosynthetic process | 5.82E-04 |
| 37 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 5.82E-04 |
| 38 | GO:0051211: anisotropic cell growth | 5.82E-04 |
| 39 | GO:0000280: nuclear division | 5.82E-04 |
| 40 | GO:0006518: peptide metabolic process | 5.82E-04 |
| 41 | GO:0010371: regulation of gibberellin biosynthetic process | 8.33E-04 |
| 42 | GO:0010239: chloroplast mRNA processing | 8.33E-04 |
| 43 | GO:0016556: mRNA modification | 8.33E-04 |
| 44 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 8.33E-04 |
| 45 | GO:0043572: plastid fission | 8.33E-04 |
| 46 | GO:0055070: copper ion homeostasis | 8.33E-04 |
| 47 | GO:0009765: photosynthesis, light harvesting | 1.10E-03 |
| 48 | GO:0044206: UMP salvage | 1.10E-03 |
| 49 | GO:0045454: cell redox homeostasis | 1.24E-03 |
| 50 | GO:0035434: copper ion transmembrane transport | 1.40E-03 |
| 51 | GO:0016120: carotene biosynthetic process | 1.40E-03 |
| 52 | GO:0043097: pyrimidine nucleoside salvage | 1.40E-03 |
| 53 | GO:0000304: response to singlet oxygen | 1.40E-03 |
| 54 | GO:0045487: gibberellin catabolic process | 1.40E-03 |
| 55 | GO:0032543: mitochondrial translation | 1.40E-03 |
| 56 | GO:0010236: plastoquinone biosynthetic process | 1.40E-03 |
| 57 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.40E-03 |
| 58 | GO:0010405: arabinogalactan protein metabolic process | 1.72E-03 |
| 59 | GO:0006206: pyrimidine nucleobase metabolic process | 1.72E-03 |
| 60 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.72E-03 |
| 61 | GO:0010190: cytochrome b6f complex assembly | 1.72E-03 |
| 62 | GO:0010027: thylakoid membrane organization | 1.99E-03 |
| 63 | GO:0010019: chloroplast-nucleus signaling pathway | 2.06E-03 |
| 64 | GO:1901259: chloroplast rRNA processing | 2.06E-03 |
| 65 | GO:0042372: phylloquinone biosynthetic process | 2.06E-03 |
| 66 | GO:0006955: immune response | 2.42E-03 |
| 67 | GO:0009395: phospholipid catabolic process | 2.42E-03 |
| 68 | GO:0009772: photosynthetic electron transport in photosystem II | 2.42E-03 |
| 69 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.42E-03 |
| 70 | GO:0009817: defense response to fungus, incompatible interaction | 2.59E-03 |
| 71 | GO:0009819: drought recovery | 2.80E-03 |
| 72 | GO:0009690: cytokinin metabolic process | 2.80E-03 |
| 73 | GO:0071555: cell wall organization | 3.14E-03 |
| 74 | GO:0017004: cytochrome complex assembly | 3.21E-03 |
| 75 | GO:0006783: heme biosynthetic process | 3.63E-03 |
| 76 | GO:0006754: ATP biosynthetic process | 3.63E-03 |
| 77 | GO:0042254: ribosome biogenesis | 4.02E-03 |
| 78 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.06E-03 |
| 79 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.52E-03 |
| 80 | GO:0009773: photosynthetic electron transport in photosystem I | 4.99E-03 |
| 81 | GO:0006415: translational termination | 4.99E-03 |
| 82 | GO:0019684: photosynthesis, light reaction | 4.99E-03 |
| 83 | GO:0018119: peptidyl-cysteine S-nitrosylation | 4.99E-03 |
| 84 | GO:0015979: photosynthesis | 6.10E-03 |
| 85 | GO:0010207: photosystem II assembly | 6.50E-03 |
| 86 | GO:0010167: response to nitrate | 7.04E-03 |
| 87 | GO:0071732: cellular response to nitric oxide | 7.04E-03 |
| 88 | GO:0055114: oxidation-reduction process | 7.60E-03 |
| 89 | GO:0009116: nucleoside metabolic process | 8.16E-03 |
| 90 | GO:0006418: tRNA aminoacylation for protein translation | 8.74E-03 |
| 91 | GO:0043622: cortical microtubule organization | 8.74E-03 |
| 92 | GO:0031408: oxylipin biosynthetic process | 9.34E-03 |
| 93 | GO:0016226: iron-sulfur cluster assembly | 9.96E-03 |
| 94 | GO:0007005: mitochondrion organization | 9.96E-03 |
| 95 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.06E-02 |
| 96 | GO:0071369: cellular response to ethylene stimulus | 1.06E-02 |
| 97 | GO:0009306: protein secretion | 1.12E-02 |
| 98 | GO:0008033: tRNA processing | 1.25E-02 |
| 99 | GO:0000413: protein peptidyl-prolyl isomerization | 1.25E-02 |
| 100 | GO:0009793: embryo development ending in seed dormancy | 1.35E-02 |
| 101 | GO:0019252: starch biosynthetic process | 1.46E-02 |
| 102 | GO:0008654: phospholipid biosynthetic process | 1.46E-02 |
| 103 | GO:0008380: RNA splicing | 1.67E-02 |
| 104 | GO:0071281: cellular response to iron ion | 1.68E-02 |
| 105 | GO:0015031: protein transport | 1.70E-02 |
| 106 | GO:0009828: plant-type cell wall loosening | 1.76E-02 |
| 107 | GO:0000910: cytokinesis | 1.92E-02 |
| 108 | GO:0042128: nitrate assimilation | 2.16E-02 |
| 109 | GO:0048481: plant ovule development | 2.41E-02 |
| 110 | GO:0006457: protein folding | 2.42E-02 |
| 111 | GO:0009407: toxin catabolic process | 2.58E-02 |
| 112 | GO:0007568: aging | 2.67E-02 |
| 113 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.78E-02 |
| 114 | GO:0030001: metal ion transport | 3.13E-02 |
| 115 | GO:0009636: response to toxic substance | 3.71E-02 |
| 116 | GO:0009664: plant-type cell wall organization | 4.01E-02 |
| 117 | GO:0006813: potassium ion transport | 4.22E-02 |
| 118 | GO:0008152: metabolic process | 4.36E-02 |
| 119 | GO:0006096: glycolytic process | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005048: signal sequence binding | 0.00E+00 |
| 2 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 3 | GO:0009974: zeinoxanthin epsilon hydroxylase activity | 0.00E+00 |
| 4 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 5 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 6 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 7 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 8 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 9 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 10 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 11 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 12 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 13 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 14 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 15 | GO:0008479: queuine tRNA-ribosyltransferase activity | 1.19E-06 |
| 16 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.19E-06 |
| 17 | GO:0019843: rRNA binding | 1.77E-05 |
| 18 | GO:0052793: pectin acetylesterase activity | 1.93E-05 |
| 19 | GO:0051920: peroxiredoxin activity | 6.56E-05 |
| 20 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.08E-04 |
| 21 | GO:0016209: antioxidant activity | 1.13E-04 |
| 22 | GO:0042834: peptidoglycan binding | 1.56E-04 |
| 23 | GO:0004828: serine-tRNA ligase activity | 1.56E-04 |
| 24 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.56E-04 |
| 25 | GO:0009374: biotin binding | 1.56E-04 |
| 26 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.56E-04 |
| 27 | GO:0004328: formamidase activity | 1.56E-04 |
| 28 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.31E-04 |
| 29 | GO:0004222: metalloendopeptidase activity | 3.03E-04 |
| 30 | GO:0008883: glutamyl-tRNA reductase activity | 3.55E-04 |
| 31 | GO:0070402: NADPH binding | 5.82E-04 |
| 32 | GO:0016531: copper chaperone activity | 5.82E-04 |
| 33 | GO:0019829: cation-transporting ATPase activity | 5.82E-04 |
| 34 | GO:0002161: aminoacyl-tRNA editing activity | 5.82E-04 |
| 35 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.82E-04 |
| 36 | GO:0004751: ribose-5-phosphate isomerase activity | 5.82E-04 |
| 37 | GO:0030267: glyoxylate reductase (NADP) activity | 5.82E-04 |
| 38 | GO:0008097: 5S rRNA binding | 8.33E-04 |
| 39 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 8.33E-04 |
| 40 | GO:0016851: magnesium chelatase activity | 8.33E-04 |
| 41 | GO:0048487: beta-tubulin binding | 8.33E-04 |
| 42 | GO:0016149: translation release factor activity, codon specific | 8.33E-04 |
| 43 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.33E-04 |
| 44 | GO:0043023: ribosomal large subunit binding | 8.33E-04 |
| 45 | GO:0003727: single-stranded RNA binding | 9.07E-04 |
| 46 | GO:0004659: prenyltransferase activity | 1.10E-03 |
| 47 | GO:0016279: protein-lysine N-methyltransferase activity | 1.10E-03 |
| 48 | GO:0004845: uracil phosphoribosyltransferase activity | 1.10E-03 |
| 49 | GO:0016836: hydro-lyase activity | 1.10E-03 |
| 50 | GO:1990137: plant seed peroxidase activity | 1.10E-03 |
| 51 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.10E-03 |
| 52 | GO:0003989: acetyl-CoA carboxylase activity | 1.40E-03 |
| 53 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.55E-03 |
| 54 | GO:2001070: starch binding | 1.72E-03 |
| 55 | GO:0004605: phosphatidate cytidylyltransferase activity | 1.72E-03 |
| 56 | GO:0080030: methyl indole-3-acetate esterase activity | 1.72E-03 |
| 57 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.72E-03 |
| 58 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.72E-03 |
| 59 | GO:0008237: metallopeptidase activity | 1.78E-03 |
| 60 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.06E-03 |
| 61 | GO:0004849: uridine kinase activity | 2.06E-03 |
| 62 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.06E-03 |
| 63 | GO:0043295: glutathione binding | 2.42E-03 |
| 64 | GO:0008312: 7S RNA binding | 2.80E-03 |
| 65 | GO:0004033: aldo-keto reductase (NADP) activity | 2.80E-03 |
| 66 | GO:0005375: copper ion transmembrane transporter activity | 3.21E-03 |
| 67 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 3.63E-03 |
| 68 | GO:0003747: translation release factor activity | 3.63E-03 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.91E-03 |
| 70 | GO:0003690: double-stranded DNA binding | 5.86E-03 |
| 71 | GO:0031072: heat shock protein binding | 5.98E-03 |
| 72 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 5.98E-03 |
| 73 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 7.59E-03 |
| 74 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 7.59E-03 |
| 75 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 7.59E-03 |
| 76 | GO:0051536: iron-sulfur cluster binding | 8.16E-03 |
| 77 | GO:0008324: cation transmembrane transporter activity | 8.74E-03 |
| 78 | GO:0004176: ATP-dependent peptidase activity | 9.34E-03 |
| 79 | GO:0016758: transferase activity, transferring hexosyl groups | 9.83E-03 |
| 80 | GO:0005509: calcium ion binding | 1.05E-02 |
| 81 | GO:0004812: aminoacyl-tRNA ligase activity | 1.19E-02 |
| 82 | GO:0003713: transcription coactivator activity | 1.32E-02 |
| 83 | GO:0019901: protein kinase binding | 1.46E-02 |
| 84 | GO:0016887: ATPase activity | 1.48E-02 |
| 85 | GO:0004601: peroxidase activity | 2.17E-02 |
| 86 | GO:0016788: hydrolase activity, acting on ester bonds | 2.21E-02 |
| 87 | GO:0030247: polysaccharide binding | 2.24E-02 |
| 88 | GO:0020037: heme binding | 2.35E-02 |
| 89 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.41E-02 |
| 90 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.48E-02 |
| 91 | GO:0004497: monooxygenase activity | 2.69E-02 |
| 92 | GO:0019825: oxygen binding | 2.73E-02 |
| 93 | GO:0003993: acid phosphatase activity | 2.94E-02 |
| 94 | GO:0052689: carboxylic ester hydrolase activity | 2.97E-02 |
| 95 | GO:0050661: NADP binding | 3.13E-02 |
| 96 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.13E-02 |
| 97 | GO:0005525: GTP binding | 3.27E-02 |
| 98 | GO:0003735: structural constituent of ribosome | 3.30E-02 |
| 99 | GO:0004364: glutathione transferase activity | 3.32E-02 |
| 100 | GO:0043621: protein self-association | 3.61E-02 |
| 101 | GO:0005198: structural molecule activity | 3.71E-02 |
| 102 | GO:0003924: GTPase activity | 3.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.87E-42 |
| 2 | GO:0009570: chloroplast stroma | 1.21E-21 |
| 3 | GO:0009941: chloroplast envelope | 1.06E-18 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.46E-12 |
| 5 | GO:0009543: chloroplast thylakoid lumen | 1.25E-09 |
| 6 | GO:0009534: chloroplast thylakoid | 2.52E-09 |
| 7 | GO:0031969: chloroplast membrane | 3.17E-09 |
| 8 | GO:0009536: plastid | 1.03E-07 |
| 9 | GO:0009579: thylakoid | 4.66E-07 |
| 10 | GO:0009654: photosystem II oxygen evolving complex | 3.10E-05 |
| 11 | GO:0031977: thylakoid lumen | 3.60E-05 |
| 12 | GO:0019898: extrinsic component of membrane | 9.77E-05 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.56E-04 |
| 14 | GO:0080085: signal recognition particle, chloroplast targeting | 3.55E-04 |
| 15 | GO:0009569: chloroplast starch grain | 3.55E-04 |
| 16 | GO:0030095: chloroplast photosystem II | 4.23E-04 |
| 17 | GO:0043234: protein complex | 5.28E-04 |
| 18 | GO:0046658: anchored component of plasma membrane | 5.42E-04 |
| 19 | GO:0010007: magnesium chelatase complex | 5.82E-04 |
| 20 | GO:0009317: acetyl-CoA carboxylase complex | 5.82E-04 |
| 21 | GO:0042651: thylakoid membrane | 6.43E-04 |
| 22 | GO:0031225: anchored component of membrane | 1.99E-03 |
| 23 | GO:0009533: chloroplast stromal thylakoid | 2.42E-03 |
| 24 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.21E-03 |
| 25 | GO:0005811: lipid particle | 3.21E-03 |
| 26 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.63E-03 |
| 27 | GO:0000311: plastid large ribosomal subunit | 5.48E-03 |
| 28 | GO:0009508: plastid chromosome | 5.98E-03 |
| 29 | GO:0009706: chloroplast inner membrane | 8.06E-03 |
| 30 | GO:0009532: plastid stroma | 9.34E-03 |
| 31 | GO:0005618: cell wall | 1.20E-02 |
| 32 | GO:0005840: ribosome | 1.28E-02 |
| 33 | GO:0009505: plant-type cell wall | 1.67E-02 |
| 34 | GO:0009295: nucleoid | 1.84E-02 |
| 35 | GO:0016020: membrane | 1.93E-02 |
| 36 | GO:0009707: chloroplast outer membrane | 2.41E-02 |
| 37 | GO:0005874: microtubule | 2.60E-02 |