co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G37220

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016553: base conversion or substitution editing	0.00E+00
2	GO:0006399: tRNA metabolic process	0.00E+00
3	GO:0061635: regulation of protein complex stability	0.00E+00
4	GO:0006412: translation	1.60E-10
5	GO:0032544: plastid translation	7.19E-06
6	GO:0043489: RNA stabilization	2.30E-05
7	GO:1904966: positive regulation of vitamin E biosynthetic process	2.30E-05
8	GO:1904964: positive regulation of phytol biosynthetic process	2.30E-05
9	GO:1902458: positive regulation of stomatal opening	2.30E-05
10	GO:0034337: RNA folding	2.30E-05
11	GO:1903426: regulation of reactive oxygen species biosynthetic process	5.89E-05
12	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.89E-05
13	GO:1902326: positive regulation of chlorophyll biosynthetic process	5.89E-05
14	GO:2001141: regulation of RNA biosynthetic process	1.55E-04
15	GO:0042254: ribosome biogenesis	1.60E-04
16	GO:0045038: protein import into chloroplast thylakoid membrane	2.73E-04
17	GO:0032973: amino acid export	3.37E-04
18	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.04E-04
19	GO:1901259: chloroplast rRNA processing	4.04E-04
20	GO:0043090: amino acid import	4.74E-04
21	GO:2000070: regulation of response to water deprivation	5.46E-04
22	GO:0071482: cellular response to light stimulus	6.21E-04
23	GO:0009735: response to cytokinin	6.51E-04
24	GO:0080144: amino acid homeostasis	6.98E-04
25	GO:0019684: photosynthesis, light reaction	9.42E-04
26	GO:0006352: DNA-templated transcription, initiation	9.42E-04
27	GO:0045037: protein import into chloroplast stroma	1.03E-03
28	GO:0009767: photosynthetic electron transport chain	1.12E-03
29	GO:0009306: protein secretion	2.02E-03
30	GO:0009561: megagametogenesis	2.02E-03
31	GO:0009741: response to brassinosteroid	2.36E-03
32	GO:0009409: response to cold	2.55E-03
33	GO:0010027: thylakoid membrane organization	3.48E-03
34	GO:0015995: chlorophyll biosynthetic process	3.89E-03
35	GO:0018298: protein-chromophore linkage	4.17E-03
36	GO:0009631: cold acclimation	4.60E-03
37	GO:0045087: innate immune response	4.90E-03
38	GO:0009637: response to blue light	4.90E-03
39	GO:0010114: response to red light	5.84E-03
40	GO:0006364: rRNA processing	7.18E-03
41	GO:0006396: RNA processing	9.36E-03
42	GO:0009451: RNA modification	1.37E-02
43	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	1.74E-02
44	GO:0009658: chloroplast organization	1.84E-02
45	GO:0015979: photosynthesis	2.35E-02
46	GO:0032259: methylation	2.74E-02
47	GO:0006629: lipid metabolic process	2.83E-02
48	GO:0006397: mRNA processing	2.91E-02

Rank	GO Term	Adjusted P value
1	GO:0019843: rRNA binding	1.27E-18
2	GO:0003735: structural constituent of ribosome	3.15E-11
3	GO:0008266: poly(U) RNA binding	2.72E-05
4	GO:0009977: proton motive force dependent protein transmembrane transporter activity	5.89E-05
5	GO:0008097: 5S rRNA binding	1.55E-04
6	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	2.12E-04
7	GO:0001053: plastid sigma factor activity	2.12E-04
8	GO:0016987: sigma factor activity	2.12E-04
9	GO:0043495: protein anchor	2.12E-04
10	GO:0008374: O-acyltransferase activity	2.73E-04
11	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.04E-04
12	GO:0019899: enzyme binding	4.74E-04
13	GO:0031072: heat shock protein binding	1.12E-03
14	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.20E-03
15	GO:0022891: substrate-specific transmembrane transporter activity	1.91E-03
16	GO:0003729: mRNA binding	2.87E-03
17	GO:0016168: chlorophyll binding	3.62E-03
18	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	4.03E-03
19	GO:0000987: core promoter proximal region sequence-specific DNA binding	5.05E-03
20	GO:0003723: RNA binding	5.62E-03
21	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	6.49E-03
22	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	7.18E-03
23	GO:0015171: amino acid transmembrane transporter activity	7.70E-03
24	GO:0051082: unfolded protein binding	9.17E-03
25	GO:0008565: protein transporter activity	1.22E-02
26	GO:0042802: identical protein binding	1.60E-02
27	GO:0008168: methyltransferase activity	1.79E-02
28	GO:0052689: carboxylic ester hydrolase activity	2.30E-02
29	GO:0003676: nucleic acid binding	4.73E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	6.45E-20
2	GO:0009941: chloroplast envelope	1.28E-13
3	GO:0009570: chloroplast stroma	1.02E-12
4	GO:0009535: chloroplast thylakoid membrane	5.63E-11
5	GO:0005840: ribosome	1.84E-09
6	GO:0009579: thylakoid	7.13E-09
7	GO:0009543: chloroplast thylakoid lumen	1.35E-06
8	GO:0009534: chloroplast thylakoid	6.25E-06
9	GO:0000311: plastid large ribosomal subunit	1.99E-05
10	GO:0009344: nitrite reductase complex [NAD(P)H]	2.30E-05
11	GO:0009547: plastid ribosome	2.30E-05
12	GO:0000312: plastid small ribosomal subunit	2.72E-05
13	GO:0033281: TAT protein transport complex	1.04E-04
14	GO:0015934: large ribosomal subunit	2.61E-04
15	GO:0022626: cytosolic ribosome	6.88E-04
16	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	6.98E-04
17	GO:0032040: small-subunit processome	1.03E-03
18	GO:0030095: chloroplast photosystem II	1.20E-03
19	GO:0022627: cytosolic small ribosomal subunit	1.53E-03
20	GO:0042651: thylakoid membrane	1.59E-03
21	GO:0009654: photosystem II oxygen evolving complex	1.59E-03
22	GO:0022625: cytosolic large ribosomal subunit	2.30E-03
23	GO:0009523: photosystem II	2.60E-03
24	GO:0019898: extrinsic component of membrane	2.60E-03
25	GO:0030529: intracellular ribonucleoprotein complex	3.48E-03
26	GO:0009706: chloroplast inner membrane	9.17E-03
27	GO:0005623: cell	1.09E-02
28	GO:0016020: membrane	1.23E-02
29	GO:0009536: plastid	1.41E-02
30	GO:0046658: anchored component of plasma membrane	1.64E-02
31	GO:0031969: chloroplast membrane	2.14E-02