GO Enrichment Analysis of Co-expressed Genes with
AT2G36145
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 4 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 8 | GO:0080114: positive regulation of glycine hydroxymethyltransferase activity | 0.00E+00 |
| 9 | GO:0009773: photosynthetic electron transport in photosystem I | 2.46E-09 |
| 10 | GO:0015994: chlorophyll metabolic process | 1.79E-07 |
| 11 | GO:0016122: xanthophyll metabolic process | 2.19E-06 |
| 12 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.83E-05 |
| 13 | GO:0010189: vitamin E biosynthetic process | 1.10E-04 |
| 14 | GO:0010028: xanthophyll cycle | 2.16E-04 |
| 15 | GO:0034337: RNA folding | 2.16E-04 |
| 16 | GO:0010450: inflorescence meristem growth | 2.16E-04 |
| 17 | GO:0000305: response to oxygen radical | 2.16E-04 |
| 18 | GO:0051775: response to redox state | 2.16E-04 |
| 19 | GO:0000476: maturation of 4.5S rRNA | 2.16E-04 |
| 20 | GO:0000967: rRNA 5'-end processing | 2.16E-04 |
| 21 | GO:0043266: regulation of potassium ion transport | 2.16E-04 |
| 22 | GO:0031338: regulation of vesicle fusion | 2.16E-04 |
| 23 | GO:0000481: maturation of 5S rRNA | 2.16E-04 |
| 24 | GO:2000021: regulation of ion homeostasis | 2.16E-04 |
| 25 | GO:0071482: cellular response to light stimulus | 2.29E-04 |
| 26 | GO:0010206: photosystem II repair | 2.78E-04 |
| 27 | GO:0000373: Group II intron splicing | 2.78E-04 |
| 28 | GO:0010205: photoinhibition | 3.31E-04 |
| 29 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.81E-04 |
| 30 | GO:0010270: photosystem II oxygen evolving complex assembly | 4.81E-04 |
| 31 | GO:0034470: ncRNA processing | 4.81E-04 |
| 32 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.81E-04 |
| 33 | GO:0009915: phloem sucrose loading | 4.81E-04 |
| 34 | GO:1900871: chloroplast mRNA modification | 4.81E-04 |
| 35 | GO:0097054: L-glutamate biosynthetic process | 4.81E-04 |
| 36 | GO:0006094: gluconeogenesis | 5.83E-04 |
| 37 | GO:0009767: photosynthetic electron transport chain | 5.83E-04 |
| 38 | GO:0009853: photorespiration | 6.48E-04 |
| 39 | GO:0019253: reductive pentose-phosphate cycle | 6.57E-04 |
| 40 | GO:0045165: cell fate commitment | 7.83E-04 |
| 41 | GO:0006000: fructose metabolic process | 7.83E-04 |
| 42 | GO:0006518: peptide metabolic process | 7.83E-04 |
| 43 | GO:0090630: activation of GTPase activity | 7.83E-04 |
| 44 | GO:0061077: chaperone-mediated protein folding | 1.09E-03 |
| 45 | GO:0006107: oxaloacetate metabolic process | 1.12E-03 |
| 46 | GO:0006537: glutamate biosynthetic process | 1.12E-03 |
| 47 | GO:0046836: glycolipid transport | 1.12E-03 |
| 48 | GO:0006810: transport | 1.28E-03 |
| 49 | GO:0006364: rRNA processing | 1.29E-03 |
| 50 | GO:0019676: ammonia assimilation cycle | 1.48E-03 |
| 51 | GO:0045727: positive regulation of translation | 1.48E-03 |
| 52 | GO:0006749: glutathione metabolic process | 1.48E-03 |
| 53 | GO:0006734: NADH metabolic process | 1.48E-03 |
| 54 | GO:0010021: amylopectin biosynthetic process | 1.48E-03 |
| 55 | GO:0055114: oxidation-reduction process | 1.67E-03 |
| 56 | GO:1902183: regulation of shoot apical meristem development | 1.89E-03 |
| 57 | GO:0010158: abaxial cell fate specification | 1.89E-03 |
| 58 | GO:0016120: carotene biosynthetic process | 1.89E-03 |
| 59 | GO:0010236: plastoquinone biosynthetic process | 1.89E-03 |
| 60 | GO:0048497: maintenance of floral organ identity | 1.89E-03 |
| 61 | GO:0019252: starch biosynthetic process | 2.03E-03 |
| 62 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 2.33E-03 |
| 63 | GO:0042549: photosystem II stabilization | 2.33E-03 |
| 64 | GO:0000470: maturation of LSU-rRNA | 2.33E-03 |
| 65 | GO:0006828: manganese ion transport | 2.33E-03 |
| 66 | GO:0009913: epidermal cell differentiation | 2.33E-03 |
| 67 | GO:0042026: protein refolding | 2.80E-03 |
| 68 | GO:0006458: 'de novo' protein folding | 2.80E-03 |
| 69 | GO:0009854: oxidative photosynthetic carbon pathway | 2.80E-03 |
| 70 | GO:0009772: photosynthetic electron transport in photosystem II | 3.30E-03 |
| 71 | GO:0010196: nonphotochemical quenching | 3.30E-03 |
| 72 | GO:0048564: photosystem I assembly | 3.82E-03 |
| 73 | GO:0005978: glycogen biosynthetic process | 3.82E-03 |
| 74 | GO:0009850: auxin metabolic process | 3.82E-03 |
| 75 | GO:0032508: DNA duplex unwinding | 3.82E-03 |
| 76 | GO:0010492: maintenance of shoot apical meristem identity | 3.82E-03 |
| 77 | GO:0008152: metabolic process | 3.97E-03 |
| 78 | GO:0010093: specification of floral organ identity | 4.38E-03 |
| 79 | GO:0006002: fructose 6-phosphate metabolic process | 4.38E-03 |
| 80 | GO:0032544: plastid translation | 4.38E-03 |
| 81 | GO:0006098: pentose-phosphate shunt | 4.95E-03 |
| 82 | GO:0048507: meristem development | 4.95E-03 |
| 83 | GO:2000024: regulation of leaf development | 4.95E-03 |
| 84 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.56E-03 |
| 85 | GO:0006631: fatty acid metabolic process | 6.11E-03 |
| 86 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.18E-03 |
| 87 | GO:0006816: calcium ion transport | 6.84E-03 |
| 88 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.84E-03 |
| 89 | GO:0009735: response to cytokinin | 7.14E-03 |
| 90 | GO:0009644: response to high light intensity | 7.17E-03 |
| 91 | GO:0042254: ribosome biogenesis | 7.18E-03 |
| 92 | GO:0005983: starch catabolic process | 7.51E-03 |
| 93 | GO:0018107: peptidyl-threonine phosphorylation | 8.22E-03 |
| 94 | GO:0005986: sucrose biosynthetic process | 8.22E-03 |
| 95 | GO:0010102: lateral root morphogenesis | 8.22E-03 |
| 96 | GO:0006108: malate metabolic process | 8.22E-03 |
| 97 | GO:0009266: response to temperature stimulus | 8.94E-03 |
| 98 | GO:0009933: meristem structural organization | 8.94E-03 |
| 99 | GO:0010207: photosystem II assembly | 8.94E-03 |
| 100 | GO:0005985: sucrose metabolic process | 9.69E-03 |
| 101 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.05E-02 |
| 102 | GO:0006096: glycolytic process | 1.06E-02 |
| 103 | GO:0015979: photosynthesis | 1.09E-02 |
| 104 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.12E-02 |
| 105 | GO:0016575: histone deacetylation | 1.21E-02 |
| 106 | GO:0018105: peptidyl-serine phosphorylation | 1.31E-02 |
| 107 | GO:0042631: cellular response to water deprivation | 1.74E-02 |
| 108 | GO:0000413: protein peptidyl-prolyl isomerization | 1.74E-02 |
| 109 | GO:0010154: fruit development | 1.83E-02 |
| 110 | GO:0048825: cotyledon development | 2.02E-02 |
| 111 | GO:0016032: viral process | 2.23E-02 |
| 112 | GO:0030163: protein catabolic process | 2.33E-02 |
| 113 | GO:0001666: response to hypoxia | 2.76E-02 |
| 114 | GO:0010027: thylakoid membrane organization | 2.76E-02 |
| 115 | GO:0015995: chlorophyll biosynthetic process | 3.10E-02 |
| 116 | GO:0009416: response to light stimulus | 3.11E-02 |
| 117 | GO:0009817: defense response to fungus, incompatible interaction | 3.34E-02 |
| 118 | GO:0018298: protein-chromophore linkage | 3.34E-02 |
| 119 | GO:0009409: response to cold | 3.68E-02 |
| 120 | GO:0006099: tricarboxylic acid cycle | 4.07E-02 |
| 121 | GO:0080167: response to karrikin | 4.23E-02 |
| 122 | GO:0005975: carbohydrate metabolic process | 4.33E-02 |
| 123 | GO:0046686: response to cadmium ion | 4.50E-02 |
| 124 | GO:0009744: response to sucrose | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 3 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0009976: tocopherol cyclase activity | 0.00E+00 |
| 8 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 9 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 10 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 11 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 12 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 13 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 14 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 15 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 16 | GO:0005528: FK506 binding | 2.18E-08 |
| 17 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.00E-07 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.35E-05 |
| 19 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 2.16E-04 |
| 20 | GO:0050308: sugar-phosphatase activity | 2.16E-04 |
| 21 | GO:0045485: omega-6 fatty acid desaturase activity | 2.16E-04 |
| 22 | GO:0004856: xylulokinase activity | 2.16E-04 |
| 23 | GO:0009496: plastoquinol--plastocyanin reductase activity | 2.16E-04 |
| 24 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 2.16E-04 |
| 25 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 2.16E-04 |
| 26 | GO:0019203: carbohydrate phosphatase activity | 2.16E-04 |
| 27 | GO:0008746: NAD(P)+ transhydrogenase activity | 2.16E-04 |
| 28 | GO:0016041: glutamate synthase (ferredoxin) activity | 2.16E-04 |
| 29 | GO:0016491: oxidoreductase activity | 2.79E-04 |
| 30 | GO:0016787: hydrolase activity | 2.80E-04 |
| 31 | GO:0004618: phosphoglycerate kinase activity | 4.81E-04 |
| 32 | GO:0033201: alpha-1,4-glucan synthase activity | 4.81E-04 |
| 33 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.81E-04 |
| 34 | GO:0019172: glyoxalase III activity | 4.81E-04 |
| 35 | GO:0004362: glutathione-disulfide reductase activity | 4.81E-04 |
| 36 | GO:0047746: chlorophyllase activity | 4.81E-04 |
| 37 | GO:0008266: poly(U) RNA binding | 6.57E-04 |
| 38 | GO:0004373: glycogen (starch) synthase activity | 7.83E-04 |
| 39 | GO:0004148: dihydrolipoyl dehydrogenase activity | 7.83E-04 |
| 40 | GO:0045158: electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity | 7.83E-04 |
| 41 | GO:0030267: glyoxylate reductase (NADP) activity | 7.83E-04 |
| 42 | GO:0017089: glycolipid transporter activity | 1.12E-03 |
| 43 | GO:0019201: nucleotide kinase activity | 1.12E-03 |
| 44 | GO:0048487: beta-tubulin binding | 1.12E-03 |
| 45 | GO:0051861: glycolipid binding | 1.48E-03 |
| 46 | GO:0008453: alanine-glyoxylate transaminase activity | 1.48E-03 |
| 47 | GO:0009011: starch synthase activity | 1.48E-03 |
| 48 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 1.48E-03 |
| 49 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.89E-03 |
| 50 | GO:0017137: Rab GTPase binding | 1.89E-03 |
| 51 | GO:0051538: 3 iron, 4 sulfur cluster binding | 1.89E-03 |
| 52 | GO:0048038: quinone binding | 2.17E-03 |
| 53 | GO:2001070: starch binding | 2.33E-03 |
| 54 | GO:0004332: fructose-bisphosphate aldolase activity | 2.33E-03 |
| 55 | GO:0042578: phosphoric ester hydrolase activity | 2.33E-03 |
| 56 | GO:0004462: lactoylglutathione lyase activity | 2.33E-03 |
| 57 | GO:0016615: malate dehydrogenase activity | 2.33E-03 |
| 58 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.80E-03 |
| 59 | GO:0030060: L-malate dehydrogenase activity | 2.80E-03 |
| 60 | GO:0004017: adenylate kinase activity | 2.80E-03 |
| 61 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 2.80E-03 |
| 62 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.80E-03 |
| 63 | GO:0004033: aldo-keto reductase (NADP) activity | 3.82E-03 |
| 64 | GO:0043022: ribosome binding | 3.82E-03 |
| 65 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 4.38E-03 |
| 66 | GO:0004222: metalloendopeptidase activity | 4.48E-03 |
| 67 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 4.95E-03 |
| 68 | GO:0005384: manganese ion transmembrane transporter activity | 5.56E-03 |
| 69 | GO:0044183: protein binding involved in protein folding | 6.84E-03 |
| 70 | GO:0015095: magnesium ion transmembrane transporter activity | 8.22E-03 |
| 71 | GO:0004022: alcohol dehydrogenase (NAD) activity | 8.22E-03 |
| 72 | GO:0050660: flavin adenine dinucleotide binding | 8.44E-03 |
| 73 | GO:0004407: histone deacetylase activity | 1.12E-02 |
| 74 | GO:0043424: protein histidine kinase binding | 1.21E-02 |
| 75 | GO:0004176: ATP-dependent peptidase activity | 1.29E-02 |
| 76 | GO:0022891: substrate-specific transmembrane transporter activity | 1.46E-02 |
| 77 | GO:0019843: rRNA binding | 1.60E-02 |
| 78 | GO:0016853: isomerase activity | 1.93E-02 |
| 79 | GO:0050662: coenzyme binding | 1.93E-02 |
| 80 | GO:0008237: metallopeptidase activity | 2.54E-02 |
| 81 | GO:0003824: catalytic activity | 2.71E-02 |
| 82 | GO:0016168: chlorophyll binding | 2.87E-02 |
| 83 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 2.99E-02 |
| 84 | GO:0004721: phosphoprotein phosphatase activity | 3.10E-02 |
| 85 | GO:0004683: calmodulin-dependent protein kinase activity | 3.10E-02 |
| 86 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 3.22E-02 |
| 87 | GO:0008236: serine-type peptidase activity | 3.22E-02 |
| 88 | GO:0008168: methyltransferase activity | 3.29E-02 |
| 89 | GO:0015238: drug transmembrane transporter activity | 3.46E-02 |
| 90 | GO:0005096: GTPase activator activity | 3.46E-02 |
| 91 | GO:0016788: hydrolase activity, acting on ester bonds | 3.49E-02 |
| 92 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.70E-02 |
| 93 | GO:0050897: cobalt ion binding | 3.70E-02 |
| 94 | GO:0003746: translation elongation factor activity | 3.95E-02 |
| 95 | GO:0050661: NADP binding | 4.33E-02 |
| 96 | GO:0003723: RNA binding | 4.42E-02 |
| 97 | GO:0052689: carboxylic ester hydrolase activity | 4.67E-02 |
| 98 | GO:0051537: 2 iron, 2 sulfur cluster binding | 5.00E-02 |
| 99 | GO:0043621: protein self-association | 5.00E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 4.41E-51 |
| 2 | GO:0009534: chloroplast thylakoid | 8.33E-24 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 3.63E-21 |
| 4 | GO:0009941: chloroplast envelope | 2.31E-17 |
| 5 | GO:0009570: chloroplast stroma | 1.04E-14 |
| 6 | GO:0009579: thylakoid | 5.53E-13 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 9.53E-12 |
| 8 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.64E-08 |
| 9 | GO:0010287: plastoglobule | 3.13E-06 |
| 10 | GO:0031977: thylakoid lumen | 4.97E-06 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.16E-04 |
| 12 | GO:0009706: chloroplast inner membrane | 3.02E-04 |
| 13 | GO:0048046: apoplast | 3.84E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 6.57E-04 |
| 15 | GO:0009512: cytochrome b6f complex | 1.89E-03 |
| 16 | GO:0010319: stromule | 2.78E-03 |
| 17 | GO:0009533: chloroplast stromal thylakoid | 3.30E-03 |
| 18 | GO:0009501: amyloplast | 3.82E-03 |
| 19 | GO:0032040: small-subunit processome | 7.51E-03 |
| 20 | GO:0031969: chloroplast membrane | 9.22E-03 |
| 21 | GO:0009654: photosystem II oxygen evolving complex | 1.21E-02 |
| 22 | GO:0042651: thylakoid membrane | 1.21E-02 |
| 23 | GO:0005759: mitochondrial matrix | 2.01E-02 |
| 24 | GO:0019898: extrinsic component of membrane | 2.02E-02 |
| 25 | GO:0009523: photosystem II | 2.02E-02 |
| 26 | GO:0030529: intracellular ribonucleoprotein complex | 2.76E-02 |
| 27 | GO:0005777: peroxisome | 3.69E-02 |