co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G35940

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043462: regulation of ATPase activity	0.00E+00
2	GO:0009991: response to extracellular stimulus	0.00E+00
3	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
4	GO:0032780: negative regulation of ATPase activity	0.00E+00
5	GO:0010111: glyoxysome organization	0.00E+00
6	GO:1900103: positive regulation of endoplasmic reticulum unfolded protein response	0.00E+00
7	GO:0060154: cellular process regulating host cell cycle in response to virus	0.00E+00
8	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
9	GO:0048227: plasma membrane to endosome transport	0.00E+00
10	GO:0051603: proteolysis involved in cellular protein catabolic process	8.14E-06
11	GO:0030968: endoplasmic reticulum unfolded protein response	1.81E-04
12	GO:0051410: detoxification of nitrogen compound	1.84E-04
13	GO:0006144: purine nucleobase metabolic process	1.84E-04
14	GO:0048508: embryonic meristem development	1.84E-04
15	GO:0006805: xenobiotic metabolic process	1.84E-04
16	GO:0019628: urate catabolic process	1.84E-04
17	GO:0019499: cyanide metabolic process	1.84E-04
18	GO:0000303: response to superoxide	1.84E-04
19	GO:0080173: male-female gamete recognition during double fertilization	1.84E-04
20	GO:0080136: priming of cellular response to stress	1.84E-04
21	GO:0034214: protein hexamerization	1.84E-04
22	GO:0046467: membrane lipid biosynthetic process	1.84E-04
23	GO:1902000: homogentisate catabolic process	4.15E-04
24	GO:0019395: fatty acid oxidation	4.15E-04
25	GO:0010608: posttranscriptional regulation of gene expression	4.15E-04
26	GO:1905182: positive regulation of urease activity	4.15E-04
27	GO:0019521: D-gluconate metabolic process	4.15E-04
28	GO:0019374: galactolipid metabolic process	4.15E-04
29	GO:0030010: establishment of cell polarity	4.15E-04
30	GO:0009945: radial axis specification	4.15E-04
31	GO:0010359: regulation of anion channel activity	6.76E-04
32	GO:0043617: cellular response to sucrose starvation	6.76E-04
33	GO:0009072: aromatic amino acid family metabolic process	6.76E-04
34	GO:0031408: oxylipin biosynthetic process	8.78E-04
35	GO:0001676: long-chain fatty acid metabolic process	9.65E-04
36	GO:0006624: vacuolar protein processing	9.65E-04
37	GO:0006809: nitric oxide biosynthetic process	9.65E-04
38	GO:0009399: nitrogen fixation	9.65E-04
39	GO:0009723: response to ethylene	1.21E-03
40	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.28E-03
41	GO:0006878: cellular copper ion homeostasis	1.28E-03
42	GO:0006542: glutamine biosynthetic process	1.28E-03
43	GO:0010363: regulation of plant-type hypersensitive response	1.28E-03
44	GO:2000038: regulation of stomatal complex development	1.28E-03
45	GO:0009738: abscisic acid-activated signaling pathway	1.29E-03
46	GO:0009626: plant-type hypersensitive response	1.30E-03
47	GO:0010200: response to chitin	1.41E-03
48	GO:0006814: sodium ion transport	1.52E-03
49	GO:0098719: sodium ion import across plasma membrane	1.63E-03
50	GO:0006090: pyruvate metabolic process	1.63E-03
51	GO:0006635: fatty acid beta-oxidation	1.74E-03
52	GO:0030163: protein catabolic process	1.98E-03
53	GO:0006751: glutathione catabolic process	2.01E-03
54	GO:0070814: hydrogen sulfide biosynthetic process	2.01E-03
55	GO:1902456: regulation of stomatal opening	2.01E-03
56	GO:1900425: negative regulation of defense response to bacterium	2.01E-03
57	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	2.01E-03
58	GO:0006914: autophagy	2.10E-03
59	GO:0071805: potassium ion transmembrane transport	2.23E-03
60	GO:0006511: ubiquitin-dependent protein catabolic process	2.35E-03
61	GO:0009942: longitudinal axis specification	2.41E-03
62	GO:0010189: vitamin E biosynthetic process	2.41E-03
63	GO:2000037: regulation of stomatal complex patterning	2.41E-03
64	GO:0000911: cytokinesis by cell plate formation	2.41E-03
65	GO:0009790: embryo development	2.45E-03
66	GO:0009816: defense response to bacterium, incompatible interaction	2.64E-03
67	GO:0010038: response to metal ion	2.83E-03
68	GO:0006955: immune response	2.83E-03
69	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.83E-03
70	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	2.83E-03
71	GO:0015937: coenzyme A biosynthetic process	2.83E-03
72	GO:0006950: response to stress	2.94E-03
73	GO:0006605: protein targeting	3.28E-03
74	GO:0006102: isocitrate metabolic process	3.28E-03
75	GO:0006644: phospholipid metabolic process	3.28E-03
76	GO:0009880: embryonic pattern specification	3.75E-03
77	GO:0010120: camalexin biosynthetic process	3.75E-03
78	GO:0048527: lateral root development	3.76E-03
79	GO:0009867: jasmonic acid mediated signaling pathway	4.12E-03
80	GO:0000373: Group II intron splicing	4.25E-03
81	GO:0006098: pentose-phosphate shunt	4.25E-03
82	GO:0090333: regulation of stomatal closure	4.25E-03
83	GO:0008202: steroid metabolic process	4.76E-03
84	GO:0051453: regulation of intracellular pH	4.76E-03
85	GO:0042761: very long-chain fatty acid biosynthetic process	4.76E-03
86	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.76E-03
87	GO:2000280: regulation of root development	4.76E-03
88	GO:0006979: response to oxidative stress	4.80E-03
89	GO:0006631: fatty acid metabolic process	4.88E-03
90	GO:0000103: sulfate assimilation	5.30E-03
91	GO:0051707: response to other organism	5.30E-03
92	GO:0010629: negative regulation of gene expression	5.30E-03
93	GO:0019538: protein metabolic process	5.30E-03
94	GO:0006970: response to osmotic stress	5.79E-03
95	GO:0072593: reactive oxygen species metabolic process	5.85E-03
96	GO:0043085: positive regulation of catalytic activity	5.85E-03
97	GO:0012501: programmed cell death	6.43E-03
98	GO:0042538: hyperosmotic salinity response	6.65E-03
99	GO:0010229: inflorescence development	7.03E-03
100	GO:0055046: microgametogenesis	7.03E-03
101	GO:0010102: lateral root morphogenesis	7.03E-03
102	GO:0006807: nitrogen compound metabolic process	7.03E-03
103	GO:0006813: potassium ion transport	7.14E-03
104	GO:0015031: protein transport	7.19E-03
105	GO:0046777: protein autophosphorylation	7.54E-03
106	GO:0009887: animal organ morphogenesis	7.64E-03
107	GO:0007034: vacuolar transport	7.64E-03
108	GO:0007031: peroxisome organization	8.27E-03
109	GO:0009825: multidimensional cell growth	8.27E-03
110	GO:0034976: response to endoplasmic reticulum stress	8.93E-03
111	GO:2000377: regulation of reactive oxygen species metabolic process	9.60E-03
112	GO:0016575: histone deacetylation	1.03E-02
113	GO:0009695: jasmonic acid biosynthetic process	1.03E-02
114	GO:0051726: regulation of cell cycle	1.08E-02
115	GO:0061077: chaperone-mediated protein folding	1.10E-02
116	GO:0016567: protein ubiquitination	1.13E-02
117	GO:0006508: proteolysis	1.15E-02
118	GO:0030433: ubiquitin-dependent ERAD pathway	1.17E-02
119	GO:0031348: negative regulation of defense response	1.17E-02
120	GO:0009814: defense response, incompatible interaction	1.17E-02
121	GO:0009561: megagametogenesis	1.32E-02
122	GO:0009651: response to salt stress	1.37E-02
123	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.40E-02
124	GO:0070417: cellular response to cold	1.40E-02
125	GO:0051028: mRNA transport	1.40E-02
126	GO:0010154: fruit development	1.56E-02
127	GO:0009646: response to absence of light	1.64E-02
128	GO:0040008: regulation of growth	1.68E-02
129	GO:0006623: protein targeting to vacuole	1.73E-02
130	GO:0010183: pollen tube guidance	1.73E-02
131	GO:0010150: leaf senescence	1.76E-02
132	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.81E-02
133	GO:0002229: defense response to oomycetes	1.81E-02
134	GO:0010193: response to ozone	1.81E-02
135	GO:0007264: small GTPase mediated signal transduction	1.90E-02
136	GO:0010583: response to cyclopentenone	1.90E-02
137	GO:0016032: viral process	1.90E-02
138	GO:0006470: protein dephosphorylation	2.02E-02
139	GO:0006464: cellular protein modification process	2.07E-02
140	GO:0010468: regulation of gene expression	2.11E-02
141	GO:0051607: defense response to virus	2.26E-02
142	GO:0009615: response to virus	2.35E-02
143	GO:0009911: positive regulation of flower development	2.35E-02
144	GO:0009611: response to wounding	2.41E-02
145	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.45E-02
146	GO:0042128: nitrate assimilation	2.55E-02
147	GO:0048573: photoperiodism, flowering	2.64E-02
148	GO:0009817: defense response to fungus, incompatible interaction	2.84E-02
149	GO:0048481: plant ovule development	2.84E-02
150	GO:0009407: toxin catabolic process	3.05E-02
151	GO:0010043: response to zinc ion	3.15E-02
152	GO:0007568: aging	3.15E-02
153	GO:0009910: negative regulation of flower development	3.15E-02
154	GO:0010119: regulation of stomatal movement	3.15E-02
155	GO:0034599: cellular response to oxidative stress	3.47E-02
156	GO:0006099: tricarboxylic acid cycle	3.47E-02
157	GO:0015979: photosynthesis	3.86E-02
158	GO:0009744: response to sucrose	4.03E-02
159	GO:0045892: negative regulation of transcription, DNA-templated	4.11E-02
160	GO:0000209: protein polyubiquitination	4.14E-02
161	GO:0009636: response to toxic substance	4.38E-02
162	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.61E-02
163	GO:0006812: cation transport	4.73E-02
164	GO:0016042: lipid catabolic process	4.84E-02
165	GO:0009751: response to salicylic acid	4.90E-02
166	GO:0006629: lipid metabolic process	4.97E-02
167	GO:0009736: cytokinin-activated signaling pathway	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
2	GO:0018822: nitrile hydratase activity	0.00E+00
3	GO:0042030: ATPase inhibitor activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
6	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
7	GO:0047558: 3-cyanoalanine hydratase activity	0.00E+00
8	GO:0050242: pyruvate, phosphate dikinase activity	0.00E+00
9	GO:0047427: cyanoalanine nitrilase activity	0.00E+00
10	GO:0004846: urate oxidase activity	0.00E+00
11	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.84E-04
12	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.84E-04
13	GO:0034450: ubiquitin-ubiquitin ligase activity	1.84E-04
14	GO:0019786: Atg8-specific protease activity	1.84E-04
15	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.15E-04
16	GO:0004594: pantothenate kinase activity	4.15E-04
17	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	4.15E-04
18	GO:0019779: Atg8 activating enzyme activity	4.15E-04
19	GO:0003988: acetyl-CoA C-acyltransferase activity	4.15E-04
20	GO:0005515: protein binding	4.86E-04
21	GO:0004175: endopeptidase activity	5.30E-04
22	GO:0003840: gamma-glutamyltransferase activity	6.76E-04
23	GO:0036374: glutathione hydrolase activity	6.76E-04
24	GO:0080061: indole-3-acetonitrile nitrilase activity	6.76E-04
25	GO:0004781: sulfate adenylyltransferase (ATP) activity	6.76E-04
26	GO:0016805: dipeptidase activity	6.76E-04
27	GO:0005093: Rab GDP-dissociation inhibitor activity	6.76E-04
28	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	6.76E-04
29	GO:0016151: nickel cation binding	6.76E-04
30	GO:0005047: signal recognition particle binding	6.76E-04
31	GO:0004165: dodecenoyl-CoA delta-isomerase activity	9.65E-04
32	GO:0004300: enoyl-CoA hydratase activity	9.65E-04
33	GO:0000257: nitrilase activity	9.65E-04
34	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	9.65E-04
35	GO:0004416: hydroxyacylglutathione hydrolase activity	9.65E-04
36	GO:0005524: ATP binding	9.97E-04
37	GO:0019776: Atg8 ligase activity	1.28E-03
38	GO:0004301: epoxide hydrolase activity	1.28E-03
39	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	1.63E-03
40	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	1.63E-03
41	GO:0004356: glutamate-ammonia ligase activity	1.63E-03
42	GO:0004197: cysteine-type endopeptidase activity	1.85E-03
43	GO:0031593: polyubiquitin binding	2.01E-03
44	GO:0047714: galactolipase activity	2.01E-03
45	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.41E-03
46	GO:0102391: decanoate--CoA ligase activity	2.41E-03
47	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.41E-03
48	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.41E-03
49	GO:0003924: GTPase activity	2.43E-03
50	GO:0004620: phospholipase activity	2.83E-03
51	GO:0004467: long-chain fatty acid-CoA ligase activity	2.83E-03
52	GO:0004143: diacylglycerol kinase activity	2.83E-03
53	GO:0008235: metalloexopeptidase activity	2.83E-03
54	GO:0015491: cation:cation antiporter activity	3.28E-03
55	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.28E-03
56	GO:0003951: NAD+ kinase activity	3.75E-03
57	GO:0008142: oxysterol binding	3.75E-03
58	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	3.75E-03
59	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.75E-03
60	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.49E-03
61	GO:0047617: acyl-CoA hydrolase activity	4.76E-03
62	GO:0045309: protein phosphorylated amino acid binding	4.76E-03
63	GO:0004713: protein tyrosine kinase activity	5.30E-03
64	GO:0000166: nucleotide binding	5.81E-03
65	GO:0004177: aminopeptidase activity	5.85E-03
66	GO:0015386: potassium:proton antiporter activity	5.85E-03
67	GO:0019904: protein domain specific binding	5.85E-03
68	GO:0016301: kinase activity	5.96E-03
69	GO:0004521: endoribonuclease activity	6.43E-03
70	GO:0031072: heat shock protein binding	7.03E-03
71	GO:0008234: cysteine-type peptidase activity	7.91E-03
72	GO:0004190: aspartic-type endopeptidase activity	8.27E-03
73	GO:0004842: ubiquitin-protein transferase activity	8.32E-03
74	GO:0004725: protein tyrosine phosphatase activity	8.93E-03
75	GO:0004407: histone deacetylase activity	9.60E-03
76	GO:0005528: FK506 binding	9.60E-03
77	GO:0015079: potassium ion transmembrane transporter activity	1.03E-02
78	GO:0004707: MAP kinase activity	1.10E-02
79	GO:0004298: threonine-type endopeptidase activity	1.10E-02
80	GO:0016787: hydrolase activity	1.77E-02
81	GO:0015385: sodium:proton antiporter activity	1.99E-02
82	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.17E-02
83	GO:0051213: dioxygenase activity	2.35E-02
84	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.55E-02
85	GO:0004683: calmodulin-dependent protein kinase activity	2.64E-02
86	GO:0004806: triglyceride lipase activity	2.64E-02
87	GO:0004601: peroxidase activity	2.73E-02
88	GO:0004674: protein serine/threonine kinase activity	2.82E-02
89	GO:0005096: GTPase activator activity	2.94E-02
90	GO:0030145: manganese ion binding	3.15E-02
91	GO:0008270: zinc ion binding	3.82E-02
92	GO:0005516: calmodulin binding	3.90E-02
93	GO:0004364: glutathione transferase activity	3.92E-02
94	GO:0004871: signal transducer activity	4.24E-02
95	GO:0043621: protein self-association	4.26E-02
96	GO:0005525: GTP binding	4.35E-02
97	GO:0004722: protein serine/threonine phosphatase activity	4.43E-02
98	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.50E-02
99	GO:0051287: NAD binding	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005785: signal recognition particle receptor complex	0.00E+00
3	GO:0000323: lytic vacuole	1.38E-05
4	GO:0005829: cytosol	7.32E-05
5	GO:0009514: glyoxysome	1.81E-04
6	GO:0031972: chloroplast intermembrane space	1.84E-04
7	GO:0005777: peroxisome	4.12E-04
8	GO:0005783: endoplasmic reticulum	4.56E-04
9	GO:0016602: CCAAT-binding factor complex	4.70E-04
10	GO:0042406: extrinsic component of endoplasmic reticulum membrane	6.76E-04
11	GO:0030139: endocytic vesicle	6.76E-04
12	GO:0005886: plasma membrane	7.81E-04
13	GO:0005775: vacuolar lumen	9.65E-04
14	GO:0005776: autophagosome	1.28E-03
15	GO:0005773: vacuole	1.68E-03
16	GO:0016363: nuclear matrix	2.41E-03
17	GO:0000421: autophagosome membrane	3.28E-03
18	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.75E-03
19	GO:0030665: clathrin-coated vesicle membrane	4.76E-03
20	GO:0031902: late endosome membrane	4.88E-03
21	GO:0017119: Golgi transport complex	5.30E-03
22	GO:0005764: lysosome	7.64E-03
23	GO:0005635: nuclear envelope	7.64E-03
24	GO:0005789: endoplasmic reticulum membrane	9.90E-03
25	GO:0005839: proteasome core complex	1.10E-02
26	GO:0031410: cytoplasmic vesicle	1.17E-02
27	GO:0030136: clathrin-coated vesicle	1.40E-02
28	GO:0005615: extracellular space	1.98E-02
29	GO:0032580: Golgi cisterna membrane	2.07E-02
30	GO:0000932: P-body	2.35E-02
31	GO:0005737: cytoplasm	2.55E-02
32	GO:0005643: nuclear pore	2.84E-02
33	GO:0000151: ubiquitin ligase complex	2.84E-02
34	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.00E-02
35	GO:0000786: nucleosome	3.26E-02
36	GO:0009570: chloroplast stroma	4.76E-02
37	GO:0005768: endosome	4.92E-02
38	GO:0000502: proteasome complex	4.98E-02