GO Enrichment Analysis of Co-expressed Genes with
AT2G34960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006069: ethanol oxidation | 0.00E+00 |
| 2 | GO:0006592: ornithine biosynthetic process | 0.00E+00 |
| 3 | GO:0046292: formaldehyde metabolic process | 0.00E+00 |
| 4 | GO:0010336: gibberellic acid homeostasis | 0.00E+00 |
| 5 | GO:0002376: immune system process | 0.00E+00 |
| 6 | GO:0030149: sphingolipid catabolic process | 0.00E+00 |
| 7 | GO:0046686: response to cadmium ion | 2.61E-10 |
| 8 | GO:0006099: tricarboxylic acid cycle | 3.85E-07 |
| 9 | GO:0006101: citrate metabolic process | 7.07E-07 |
| 10 | GO:0006102: isocitrate metabolic process | 7.76E-07 |
| 11 | GO:0072334: UDP-galactose transmembrane transport | 6.29E-06 |
| 12 | GO:0034976: response to endoplasmic reticulum stress | 1.16E-05 |
| 13 | GO:0006097: glyoxylate cycle | 1.95E-05 |
| 14 | GO:0030968: endoplasmic reticulum unfolded protein response | 9.23E-05 |
| 15 | GO:0045454: cell redox homeostasis | 9.92E-05 |
| 16 | GO:0035266: meristem growth | 1.18E-04 |
| 17 | GO:0007292: female gamete generation | 1.18E-04 |
| 18 | GO:0015760: glucose-6-phosphate transport | 1.18E-04 |
| 19 | GO:1990641: response to iron ion starvation | 1.18E-04 |
| 20 | GO:0006007: glucose catabolic process | 1.18E-04 |
| 21 | GO:0019673: GDP-mannose metabolic process | 1.18E-04 |
| 22 | GO:0003400: regulation of COPII vesicle coating | 1.18E-04 |
| 23 | GO:0006457: protein folding | 1.34E-04 |
| 24 | GO:0043067: regulation of programmed cell death | 1.37E-04 |
| 25 | GO:0006499: N-terminal protein myristoylation | 1.78E-04 |
| 26 | GO:0045087: innate immune response | 2.17E-04 |
| 27 | GO:0051788: response to misfolded protein | 2.73E-04 |
| 28 | GO:0015712: hexose phosphate transport | 2.73E-04 |
| 29 | GO:0007051: spindle organization | 2.73E-04 |
| 30 | GO:0019752: carboxylic acid metabolic process | 2.73E-04 |
| 31 | GO:0090351: seedling development | 3.23E-04 |
| 32 | GO:0042351: 'de novo' GDP-L-fucose biosynthetic process | 4.52E-04 |
| 33 | GO:0035436: triose phosphate transmembrane transport | 4.52E-04 |
| 34 | GO:0045039: protein import into mitochondrial inner membrane | 4.52E-04 |
| 35 | GO:0060968: regulation of gene silencing | 4.52E-04 |
| 36 | GO:0015714: phosphoenolpyruvate transport | 4.52E-04 |
| 37 | GO:0009555: pollen development | 4.57E-04 |
| 38 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.47E-04 |
| 39 | GO:0010109: regulation of photosynthesis | 8.60E-04 |
| 40 | GO:1902584: positive regulation of response to water deprivation | 8.60E-04 |
| 41 | GO:0051205: protein insertion into membrane | 8.60E-04 |
| 42 | GO:0015713: phosphoglycerate transport | 8.60E-04 |
| 43 | GO:0006461: protein complex assembly | 1.08E-03 |
| 44 | GO:0007029: endoplasmic reticulum organization | 1.08E-03 |
| 45 | GO:0006405: RNA export from nucleus | 1.08E-03 |
| 46 | GO:0006465: signal peptide processing | 1.08E-03 |
| 47 | GO:0045927: positive regulation of growth | 1.08E-03 |
| 48 | GO:0000304: response to singlet oxygen | 1.08E-03 |
| 49 | GO:0009697: salicylic acid biosynthetic process | 1.08E-03 |
| 50 | GO:0006090: pyruvate metabolic process | 1.08E-03 |
| 51 | GO:0009643: photosynthetic acclimation | 1.33E-03 |
| 52 | GO:0006014: D-ribose metabolic process | 1.33E-03 |
| 53 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.33E-03 |
| 54 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 1.33E-03 |
| 55 | GO:0048827: phyllome development | 1.33E-03 |
| 56 | GO:0048232: male gamete generation | 1.33E-03 |
| 57 | GO:0043248: proteasome assembly | 1.33E-03 |
| 58 | GO:0042176: regulation of protein catabolic process | 1.33E-03 |
| 59 | GO:0035435: phosphate ion transmembrane transport | 1.33E-03 |
| 60 | GO:0000060: protein import into nucleus, translocation | 1.33E-03 |
| 61 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.59E-03 |
| 62 | GO:0034389: lipid particle organization | 1.59E-03 |
| 63 | GO:0006120: mitochondrial electron transport, NADH to ubiquinone | 1.59E-03 |
| 64 | GO:0008219: cell death | 1.77E-03 |
| 65 | GO:0080186: developmental vegetative growth | 1.87E-03 |
| 66 | GO:0000082: G1/S transition of mitotic cell cycle | 1.87E-03 |
| 67 | GO:0042773: ATP synthesis coupled electron transport | 1.87E-03 |
| 68 | GO:0010078: maintenance of root meristem identity | 2.16E-03 |
| 69 | GO:0006875: cellular metal ion homeostasis | 2.16E-03 |
| 70 | GO:0030091: protein repair | 2.16E-03 |
| 71 | GO:0009853: photorespiration | 2.23E-03 |
| 72 | GO:0006526: arginine biosynthetic process | 2.46E-03 |
| 73 | GO:0048829: root cap development | 3.46E-03 |
| 74 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.58E-03 |
| 75 | GO:0010015: root morphogenesis | 3.82E-03 |
| 76 | GO:0009807: lignan biosynthetic process | 3.82E-03 |
| 77 | GO:0006486: protein glycosylation | 3.84E-03 |
| 78 | GO:0006096: glycolytic process | 4.54E-03 |
| 79 | GO:0006108: malate metabolic process | 4.57E-03 |
| 80 | GO:0048316: seed development | 4.68E-03 |
| 81 | GO:0032259: methylation | 4.86E-03 |
| 82 | GO:0009933: meristem structural organization | 4.97E-03 |
| 83 | GO:0009553: embryo sac development | 5.30E-03 |
| 84 | GO:0009624: response to nematode | 5.46E-03 |
| 85 | GO:0006071: glycerol metabolic process | 5.79E-03 |
| 86 | GO:0000162: tryptophan biosynthetic process | 5.79E-03 |
| 87 | GO:0006487: protein N-linked glycosylation | 6.22E-03 |
| 88 | GO:0006979: response to oxidative stress | 6.62E-03 |
| 89 | GO:0009695: jasmonic acid biosynthetic process | 6.66E-03 |
| 90 | GO:0016998: cell wall macromolecule catabolic process | 7.11E-03 |
| 91 | GO:0031408: oxylipin biosynthetic process | 7.11E-03 |
| 92 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.57E-03 |
| 93 | GO:0031348: negative regulation of defense response | 7.57E-03 |
| 94 | GO:0009306: protein secretion | 8.53E-03 |
| 95 | GO:0051028: mRNA transport | 9.02E-03 |
| 96 | GO:0010118: stomatal movement | 9.53E-03 |
| 97 | GO:0048868: pollen tube development | 1.00E-02 |
| 98 | GO:0006520: cellular amino acid metabolic process | 1.00E-02 |
| 99 | GO:0006952: defense response | 1.07E-02 |
| 100 | GO:0019252: starch biosynthetic process | 1.11E-02 |
| 101 | GO:0009749: response to glucose | 1.11E-02 |
| 102 | GO:0006508: proteolysis | 1.12E-02 |
| 103 | GO:0007264: small GTPase mediated signal transduction | 1.22E-02 |
| 104 | GO:0009651: response to salt stress | 1.30E-02 |
| 105 | GO:0009567: double fertilization forming a zygote and endosperm | 1.33E-02 |
| 106 | GO:0010286: heat acclimation | 1.39E-02 |
| 107 | GO:0009615: response to virus | 1.51E-02 |
| 108 | GO:0009607: response to biotic stimulus | 1.57E-02 |
| 109 | GO:0042128: nitrate assimilation | 1.63E-02 |
| 110 | GO:0006888: ER to Golgi vesicle-mediated transport | 1.70E-02 |
| 111 | GO:0080167: response to karrikin | 1.82E-02 |
| 112 | GO:0010311: lateral root formation | 1.89E-02 |
| 113 | GO:0010043: response to zinc ion | 2.02E-02 |
| 114 | GO:0009744: response to sucrose | 2.59E-02 |
| 115 | GO:0042742: defense response to bacterium | 2.60E-02 |
| 116 | GO:0009408: response to heat | 2.68E-02 |
| 117 | GO:0009965: leaf morphogenesis | 2.81E-02 |
| 118 | GO:0006855: drug transmembrane transport | 2.88E-02 |
| 119 | GO:0009846: pollen germination | 3.04E-02 |
| 120 | GO:0009809: lignin biosynthetic process | 3.20E-02 |
| 121 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.28E-02 |
| 122 | GO:0006857: oligopeptide transport | 3.36E-02 |
| 123 | GO:0048367: shoot system development | 3.68E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008777: acetylornithine deacetylase activity | 0.00E+00 |
| 2 | GO:0080007: S-nitrosoglutathione reductase activity | 0.00E+00 |
| 3 | GO:0008117: sphinganine-1-phosphate aldolase activity | 0.00E+00 |
| 4 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 5 | GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity | 0.00E+00 |
| 6 | GO:0003994: aconitate hydratase activity | 7.07E-07 |
| 7 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.52E-05 |
| 8 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.95E-05 |
| 9 | GO:0003756: protein disulfide isomerase activity | 2.99E-05 |
| 10 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.18E-04 |
| 11 | GO:0008446: GDP-mannose 4,6-dehydratase activity | 1.18E-04 |
| 12 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 1.18E-04 |
| 13 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 1.18E-04 |
| 14 | GO:0005090: Sar guanyl-nucleotide exchange factor activity | 1.18E-04 |
| 15 | GO:0004321: fatty-acyl-CoA synthase activity | 1.18E-04 |
| 16 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.53E-04 |
| 17 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.53E-04 |
| 18 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 2.73E-04 |
| 19 | GO:0046537: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity | 2.73E-04 |
| 20 | GO:0015152: glucose-6-phosphate transmembrane transporter activity | 2.73E-04 |
| 21 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 2.73E-04 |
| 22 | GO:0048531: beta-1,3-galactosyltransferase activity | 2.73E-04 |
| 23 | GO:0018708: thiol S-methyltransferase activity | 2.73E-04 |
| 24 | GO:0019172: glyoxalase III activity | 2.73E-04 |
| 25 | GO:0015036: disulfide oxidoreductase activity | 2.73E-04 |
| 26 | GO:0071917: triose-phosphate transmembrane transporter activity | 4.52E-04 |
| 27 | GO:0000030: mannosyltransferase activity | 4.52E-04 |
| 28 | GO:0005460: UDP-glucose transmembrane transporter activity | 6.47E-04 |
| 29 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 6.47E-04 |
| 30 | GO:0004108: citrate (Si)-synthase activity | 6.47E-04 |
| 31 | GO:0051082: unfolded protein binding | 7.02E-04 |
| 32 | GO:0005507: copper ion binding | 8.53E-04 |
| 33 | GO:0016004: phospholipase activator activity | 8.60E-04 |
| 34 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 8.60E-04 |
| 35 | GO:0015120: phosphoglycerate transmembrane transporter activity | 8.60E-04 |
| 36 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 8.60E-04 |
| 37 | GO:0004470: malic enzyme activity | 8.60E-04 |
| 38 | GO:0008137: NADH dehydrogenase (ubiquinone) activity | 9.58E-04 |
| 39 | GO:0015301: anion:anion antiporter activity | 1.08E-03 |
| 40 | GO:0005452: inorganic anion exchanger activity | 1.08E-03 |
| 41 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 1.08E-03 |
| 42 | GO:0000104: succinate dehydrogenase activity | 1.08E-03 |
| 43 | GO:0036402: proteasome-activating ATPase activity | 1.33E-03 |
| 44 | GO:0005509: calcium ion binding | 1.36E-03 |
| 45 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 1.59E-03 |
| 46 | GO:0051020: GTPase binding | 1.59E-03 |
| 47 | GO:0051920: peroxiredoxin activity | 1.59E-03 |
| 48 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.59E-03 |
| 49 | GO:0004747: ribokinase activity | 1.59E-03 |
| 50 | GO:0005096: GTPase activator activity | 1.85E-03 |
| 51 | GO:0016831: carboxy-lyase activity | 1.87E-03 |
| 52 | GO:0016209: antioxidant activity | 2.16E-03 |
| 53 | GO:0008865: fructokinase activity | 2.16E-03 |
| 54 | GO:0008135: translation factor activity, RNA binding | 2.46E-03 |
| 55 | GO:0016207: 4-coumarate-CoA ligase activity | 2.78E-03 |
| 56 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.78E-03 |
| 57 | GO:0008233: peptidase activity | 3.07E-03 |
| 58 | GO:0030955: potassium ion binding | 3.12E-03 |
| 59 | GO:0004743: pyruvate kinase activity | 3.12E-03 |
| 60 | GO:0030234: enzyme regulator activity | 3.46E-03 |
| 61 | GO:0008171: O-methyltransferase activity | 3.46E-03 |
| 62 | GO:0004129: cytochrome-c oxidase activity | 3.82E-03 |
| 63 | GO:0009982: pseudouridine synthase activity | 4.57E-03 |
| 64 | GO:0004190: aspartic-type endopeptidase activity | 5.37E-03 |
| 65 | GO:0017025: TBP-class protein binding | 5.37E-03 |
| 66 | GO:0051536: iron-sulfur cluster binding | 6.22E-03 |
| 67 | GO:0003954: NADH dehydrogenase activity | 6.22E-03 |
| 68 | GO:0004298: threonine-type endopeptidase activity | 7.11E-03 |
| 69 | GO:0015297: antiporter activity | 9.00E-03 |
| 70 | GO:0008536: Ran GTPase binding | 1.00E-02 |
| 71 | GO:0016853: isomerase activity | 1.06E-02 |
| 72 | GO:0048038: quinone binding | 1.16E-02 |
| 73 | GO:0008237: metallopeptidase activity | 1.39E-02 |
| 74 | GO:0008168: methyltransferase activity | 1.41E-02 |
| 75 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.76E-02 |
| 76 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.82E-02 |
| 77 | GO:0015238: drug transmembrane transporter activity | 1.89E-02 |
| 78 | GO:0005525: GTP binding | 2.00E-02 |
| 79 | GO:0030145: manganese ion binding | 2.02E-02 |
| 80 | GO:0050897: cobalt ion binding | 2.02E-02 |
| 81 | GO:0003746: translation elongation factor activity | 2.16E-02 |
| 82 | GO:0005524: ATP binding | 2.18E-02 |
| 83 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.30E-02 |
| 84 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.73E-02 |
| 85 | GO:0009055: electron carrier activity | 2.88E-02 |
| 86 | GO:0005215: transporter activity | 2.94E-02 |
| 87 | GO:0051287: NAD binding | 2.96E-02 |
| 88 | GO:0008234: cysteine-type peptidase activity | 3.44E-02 |
| 89 | GO:0045735: nutrient reservoir activity | 3.60E-02 |
| 90 | GO:0016301: kinase activity | 3.66E-02 |
| 91 | GO:0016874: ligase activity | 3.94E-02 |
| 92 | GO:0016887: ATPase activity | 4.14E-02 |
| 93 | GO:0015035: protein disulfide oxidoreductase activity | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0097708: intracellular vesicle | 0.00E+00 |
| 2 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 3 | GO:0005783: endoplasmic reticulum | 3.60E-11 |
| 4 | GO:0005774: vacuolar membrane | 2.26E-06 |
| 5 | GO:0030176: integral component of endoplasmic reticulum membrane | 9.63E-06 |
| 6 | GO:0030173: integral component of Golgi membrane | 4.17E-05 |
| 7 | GO:0005788: endoplasmic reticulum lumen | 1.15E-04 |
| 8 | GO:0005787: signal peptidase complex | 1.18E-04 |
| 9 | GO:0031314: extrinsic component of mitochondrial inner membrane | 2.73E-04 |
| 10 | GO:0005739: mitochondrion | 3.83E-04 |
| 11 | GO:0045271: respiratory chain complex I | 4.41E-04 |
| 12 | GO:0000502: proteasome complex | 4.50E-04 |
| 13 | GO:0005747: mitochondrial respiratory chain complex I | 5.79E-04 |
| 14 | GO:0009507: chloroplast | 6.07E-04 |
| 15 | GO:0005829: cytosol | 6.78E-04 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 8.52E-04 |
| 17 | GO:0009898: cytoplasmic side of plasma membrane | 8.60E-04 |
| 18 | GO:0030660: Golgi-associated vesicle membrane | 8.60E-04 |
| 19 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 8.60E-04 |
| 20 | GO:0005773: vacuole | 1.03E-03 |
| 21 | GO:0005746: mitochondrial respiratory chain | 1.08E-03 |
| 22 | GO:0008250: oligosaccharyltransferase complex | 1.08E-03 |
| 23 | GO:0005798: Golgi-associated vesicle | 1.33E-03 |
| 24 | GO:0031597: cytosolic proteasome complex | 1.59E-03 |
| 25 | GO:0031595: nuclear proteasome complex | 1.87E-03 |
| 26 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 2.16E-03 |
| 27 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 2.16E-03 |
| 28 | GO:0009505: plant-type cell wall | 2.34E-03 |
| 29 | GO:0005811: lipid particle | 2.46E-03 |
| 30 | GO:0000326: protein storage vacuole | 2.46E-03 |
| 31 | GO:0005777: peroxisome | 2.77E-03 |
| 32 | GO:0031090: organelle membrane | 2.78E-03 |
| 33 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.12E-03 |
| 34 | GO:0031969: chloroplast membrane | 3.14E-03 |
| 35 | GO:0031966: mitochondrial membrane | 3.58E-03 |
| 36 | GO:0005765: lysosomal membrane | 3.82E-03 |
| 37 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.82E-03 |
| 38 | GO:0016020: membrane | 5.45E-03 |
| 39 | GO:0005886: plasma membrane | 5.63E-03 |
| 40 | GO:0005839: proteasome core complex | 7.11E-03 |
| 41 | GO:0005759: mitochondrial matrix | 8.58E-03 |
| 42 | GO:0005618: cell wall | 1.73E-02 |
| 43 | GO:0005643: nuclear pore | 1.82E-02 |
| 44 | GO:0005743: mitochondrial inner membrane | 2.50E-02 |
| 45 | GO:0016021: integral component of membrane | 3.39E-02 |
| 46 | GO:0005794: Golgi apparatus | 4.16E-02 |
| 47 | GO:0048046: apoplast | 4.46E-02 |