GO Enrichment Analysis of Co-expressed Genes with
AT2G34590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006633: fatty acid biosynthetic process | 5.66E-05 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 5.85E-05 |
| 6 | GO:0000476: maturation of 4.5S rRNA | 7.75E-05 |
| 7 | GO:0000967: rRNA 5'-end processing | 7.75E-05 |
| 8 | GO:0010480: microsporocyte differentiation | 7.75E-05 |
| 9 | GO:0009767: photosynthetic electron transport chain | 1.40E-04 |
| 10 | GO:0034470: ncRNA processing | 1.85E-04 |
| 11 | GO:0010623: programmed cell death involved in cell development | 3.11E-04 |
| 12 | GO:2001295: malonyl-CoA biosynthetic process | 3.11E-04 |
| 13 | GO:0055070: copper ion homeostasis | 4.49E-04 |
| 14 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 4.49E-04 |
| 15 | GO:0080170: hydrogen peroxide transmembrane transport | 4.49E-04 |
| 16 | GO:0000304: response to singlet oxygen | 7.57E-04 |
| 17 | GO:0035434: copper ion transmembrane transport | 7.57E-04 |
| 18 | GO:0006465: signal peptide processing | 7.57E-04 |
| 19 | GO:0006796: phosphate-containing compound metabolic process | 9.24E-04 |
| 20 | GO:0010190: cytochrome b6f complex assembly | 9.24E-04 |
| 21 | GO:0006751: glutathione catabolic process | 9.24E-04 |
| 22 | GO:0042549: photosystem II stabilization | 9.24E-04 |
| 23 | GO:0010256: endomembrane system organization | 9.24E-04 |
| 24 | GO:0098869: cellular oxidant detoxification | 1.29E-03 |
| 25 | GO:0048437: floral organ development | 1.29E-03 |
| 26 | GO:0010196: nonphotochemical quenching | 1.29E-03 |
| 27 | GO:0008610: lipid biosynthetic process | 1.48E-03 |
| 28 | GO:0006526: arginine biosynthetic process | 1.69E-03 |
| 29 | GO:0010206: photosystem II repair | 1.91E-03 |
| 30 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.14E-03 |
| 31 | GO:1900865: chloroplast RNA modification | 2.14E-03 |
| 32 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.37E-03 |
| 33 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.61E-03 |
| 34 | GO:0048229: gametophyte development | 2.61E-03 |
| 35 | GO:0009684: indoleacetic acid biosynthetic process | 2.61E-03 |
| 36 | GO:0009773: photosynthetic electron transport in photosystem I | 2.61E-03 |
| 37 | GO:0010075: regulation of meristem growth | 3.12E-03 |
| 38 | GO:0009934: regulation of meristem structural organization | 3.38E-03 |
| 39 | GO:0006833: water transport | 3.94E-03 |
| 40 | GO:0007010: cytoskeleton organization | 4.23E-03 |
| 41 | GO:0006418: tRNA aminoacylation for protein translation | 4.52E-03 |
| 42 | GO:0009735: response to cytokinin | 4.64E-03 |
| 43 | GO:0031408: oxylipin biosynthetic process | 4.82E-03 |
| 44 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.13E-03 |
| 45 | GO:0009306: protein secretion | 5.77E-03 |
| 46 | GO:0034220: ion transmembrane transport | 6.44E-03 |
| 47 | GO:0048653: anther development | 6.44E-03 |
| 48 | GO:0006520: cellular amino acid metabolic process | 6.78E-03 |
| 49 | GO:0080156: mitochondrial mRNA modification | 7.85E-03 |
| 50 | GO:0030163: protein catabolic process | 8.59E-03 |
| 51 | GO:0010027: thylakoid membrane organization | 1.02E-02 |
| 52 | GO:0048481: plant ovule development | 1.22E-02 |
| 53 | GO:0006811: ion transport | 1.31E-02 |
| 54 | GO:0006508: proteolysis | 1.51E-02 |
| 55 | GO:0030001: metal ion transport | 1.59E-02 |
| 56 | GO:0008152: metabolic process | 1.68E-02 |
| 57 | GO:0009409: response to cold | 1.87E-02 |
| 58 | GO:0031347: regulation of defense response | 1.98E-02 |
| 59 | GO:0006810: transport | 2.07E-02 |
| 60 | GO:0006364: rRNA processing | 2.14E-02 |
| 61 | GO:0005975: carbohydrate metabolic process | 2.16E-02 |
| 62 | GO:0051603: proteolysis involved in cellular protein catabolic process | 2.19E-02 |
| 63 | GO:0046686: response to cadmium ion | 2.23E-02 |
| 64 | GO:0009742: brassinosteroid mediated signaling pathway | 2.87E-02 |
| 65 | GO:0042744: hydrogen peroxide catabolic process | 3.54E-02 |
| 66 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 4.40E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 2 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 3 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 4 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 5 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 7.75E-05 |
| 6 | GO:0003867: 4-aminobutyrate transaminase activity | 7.75E-05 |
| 7 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.85E-04 |
| 8 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.85E-04 |
| 9 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.85E-04 |
| 10 | GO:0005528: FK506 binding | 2.27E-04 |
| 11 | GO:0004075: biotin carboxylase activity | 3.11E-04 |
| 12 | GO:0030267: glyoxylate reductase (NADP) activity | 3.11E-04 |
| 13 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.11E-04 |
| 14 | GO:0016531: copper chaperone activity | 3.11E-04 |
| 15 | GO:0019829: cation-transporting ATPase activity | 3.11E-04 |
| 16 | GO:0002161: aminoacyl-tRNA editing activity | 3.11E-04 |
| 17 | GO:0016851: magnesium chelatase activity | 4.49E-04 |
| 18 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 5.98E-04 |
| 19 | GO:0016836: hydro-lyase activity | 5.98E-04 |
| 20 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 5.98E-04 |
| 21 | GO:0003989: acetyl-CoA carboxylase activity | 7.57E-04 |
| 22 | GO:0004040: amidase activity | 7.57E-04 |
| 23 | GO:0008200: ion channel inhibitor activity | 9.24E-04 |
| 24 | GO:0042578: phosphoric ester hydrolase activity | 9.24E-04 |
| 25 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.10E-03 |
| 26 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.10E-03 |
| 27 | GO:0004620: phospholipase activity | 1.29E-03 |
| 28 | GO:0004427: inorganic diphosphatase activity | 1.29E-03 |
| 29 | GO:0043022: ribosome binding | 1.48E-03 |
| 30 | GO:0004033: aldo-keto reductase (NADP) activity | 1.48E-03 |
| 31 | GO:0005375: copper ion transmembrane transporter activity | 1.69E-03 |
| 32 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.92E-03 |
| 33 | GO:0000049: tRNA binding | 2.86E-03 |
| 34 | GO:0004565: beta-galactosidase activity | 3.12E-03 |
| 35 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 3.12E-03 |
| 36 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.94E-03 |
| 37 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.94E-03 |
| 38 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.94E-03 |
| 39 | GO:0003714: transcription corepressor activity | 4.23E-03 |
| 40 | GO:0004252: serine-type endopeptidase activity | 4.33E-03 |
| 41 | GO:0033612: receptor serine/threonine kinase binding | 4.82E-03 |
| 42 | GO:0004812: aminoacyl-tRNA ligase activity | 6.10E-03 |
| 43 | GO:0048038: quinone binding | 7.85E-03 |
| 44 | GO:0004197: cysteine-type endopeptidase activity | 8.22E-03 |
| 45 | GO:0015250: water channel activity | 1.02E-02 |
| 46 | GO:0008236: serine-type peptidase activity | 1.18E-02 |
| 47 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.22E-02 |
| 48 | GO:0004222: metalloendopeptidase activity | 1.31E-02 |
| 49 | GO:0051287: NAD binding | 1.98E-02 |
| 50 | GO:0008234: cysteine-type peptidase activity | 2.30E-02 |
| 51 | GO:0031625: ubiquitin protein ligase binding | 2.30E-02 |
| 52 | GO:0019843: rRNA binding | 3.23E-02 |
| 53 | GO:0016787: hydrolase activity | 3.31E-02 |
| 54 | GO:0005507: copper ion binding | 3.85E-02 |
| 55 | GO:0005516: calmodulin binding | 4.07E-02 |
| 56 | GO:0008017: microtubule binding | 4.19E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.56E-13 |
| 2 | GO:0009570: chloroplast stroma | 2.75E-11 |
| 3 | GO:0009534: chloroplast thylakoid | 1.35E-07 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.99E-06 |
| 5 | GO:0009941: chloroplast envelope | 4.89E-06 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 3.66E-05 |
| 7 | GO:0009344: nitrite reductase complex [NAD(P)H] | 7.75E-05 |
| 8 | GO:0042651: thylakoid membrane | 2.52E-04 |
| 9 | GO:0010007: magnesium chelatase complex | 3.11E-04 |
| 10 | GO:0009579: thylakoid | 1.24E-03 |
| 11 | GO:0009533: chloroplast stromal thylakoid | 1.29E-03 |
| 12 | GO:0031977: thylakoid lumen | 1.52E-03 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.91E-03 |
| 14 | GO:0005764: lysosome | 3.38E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 3.38E-03 |
| 16 | GO:0043234: protein complex | 3.94E-03 |
| 17 | GO:0009654: photosystem II oxygen evolving complex | 4.52E-03 |
| 18 | GO:0019898: extrinsic component of membrane | 7.49E-03 |
| 19 | GO:0031969: chloroplast membrane | 1.03E-02 |
| 20 | GO:0009705: plant-type vacuole membrane | 4.06E-02 |
| 21 | GO:0005615: extracellular space | 4.40E-02 |