Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G34070

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006780: uroporphyrinogen III biosynthetic process0.00E+00
2GO:0033494: ferulate metabolic process0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
5GO:0042493: response to drug0.00E+00
6GO:2000505: regulation of energy homeostasis0.00E+00
7GO:0002184: cytoplasmic translational termination0.00E+00
8GO:0010206: photosystem II repair2.17E-05
9GO:0034220: ion transmembrane transport2.27E-05
10GO:0080170: hydrogen peroxide transmembrane transport4.12E-05
11GO:0010411: xyloglucan metabolic process1.12E-04
12GO:0006833: water transport1.24E-04
13GO:0010444: guard mother cell differentiation2.93E-04
14GO:0006633: fatty acid biosynthetic process3.25E-04
15GO:0070509: calcium ion import3.42E-04
16GO:0046520: sphingoid biosynthetic process3.42E-04
17GO:0007263: nitric oxide mediated signal transduction3.42E-04
18GO:0006824: cobalt ion transport3.42E-04
19GO:0043266: regulation of potassium ion transport3.42E-04
20GO:0071370: cellular response to gibberellin stimulus3.42E-04
21GO:0031338: regulation of vesicle fusion3.42E-04
22GO:0006723: cuticle hydrocarbon biosynthetic process3.42E-04
23GO:0000481: maturation of 5S rRNA3.42E-04
24GO:2000021: regulation of ion homeostasis3.42E-04
25GO:0034337: RNA folding3.42E-04
26GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway3.42E-04
27GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.42E-04
28GO:0034755: iron ion transmembrane transport7.45E-04
29GO:0045717: negative regulation of fatty acid biosynthetic process7.45E-04
30GO:0010541: acropetal auxin transport7.45E-04
31GO:0001736: establishment of planar polarity7.45E-04
32GO:0010270: photosystem II oxygen evolving complex assembly7.45E-04
33GO:0009826: unidimensional cell growth7.94E-04
34GO:0006816: calcium ion transport8.59E-04
35GO:0015995: chlorophyll biosynthetic process9.77E-04
36GO:0016024: CDP-diacylglycerol biosynthetic process9.79E-04
37GO:0010311: lateral root formation1.18E-03
38GO:0043447: alkane biosynthetic process1.21E-03
39GO:0010160: formation of animal organ boundary1.21E-03
40GO:0006518: peptide metabolic process1.21E-03
41GO:0045493: xylan catabolic process1.21E-03
42GO:0090630: activation of GTPase activity1.21E-03
43GO:2001295: malonyl-CoA biosynthetic process1.21E-03
44GO:0010143: cutin biosynthetic process1.25E-03
45GO:0010207: photosystem II assembly1.25E-03
46GO:0010025: wax biosynthetic process1.55E-03
47GO:0043481: anthocyanin accumulation in tissues in response to UV light1.74E-03
48GO:0009650: UV protection1.74E-03
49GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.74E-03
50GO:1901332: negative regulation of lateral root development1.74E-03
51GO:0055070: copper ion homeostasis1.74E-03
52GO:0007231: osmosensory signaling pathway1.74E-03
53GO:0051639: actin filament network formation1.74E-03
54GO:0007017: microtubule-based process1.90E-03
55GO:0042546: cell wall biogenesis2.17E-03
56GO:0006183: GTP biosynthetic process2.33E-03
57GO:2000122: negative regulation of stomatal complex development2.33E-03
58GO:0030104: water homeostasis2.33E-03
59GO:0033500: carbohydrate homeostasis2.33E-03
60GO:0010037: response to carbon dioxide2.33E-03
61GO:0015976: carbon utilization2.33E-03
62GO:0051764: actin crosslink formation2.33E-03
63GO:0071555: cell wall organization2.46E-03
64GO:0048443: stamen development2.71E-03
65GO:0016120: carotene biosynthetic process2.98E-03
66GO:0035434: copper ion transmembrane transport2.98E-03
67GO:0016123: xanthophyll biosynthetic process2.98E-03
68GO:0055085: transmembrane transport3.04E-03
69GO:0042335: cuticle development3.17E-03
70GO:0009958: positive gravitropism3.41E-03
71GO:0006655: phosphatidylglycerol biosynthetic process3.68E-03
72GO:0060918: auxin transport3.68E-03
73GO:0006828: manganese ion transport3.68E-03
74GO:0006796: phosphate-containing compound metabolic process3.68E-03
75GO:0010190: cytochrome b6f complex assembly3.68E-03
76GO:0006751: glutathione catabolic process3.68E-03
77GO:0042254: ribosome biogenesis3.92E-03
78GO:0016132: brassinosteroid biosynthetic process4.22E-03
79GO:0009612: response to mechanical stimulus4.43E-03
80GO:0006694: steroid biosynthetic process4.43E-03
81GO:0009624: response to nematode4.73E-03
82GO:0030497: fatty acid elongation5.23E-03
83GO:0010196: nonphotochemical quenching5.23E-03
84GO:0009645: response to low light intensity stimulus5.23E-03
85GO:0051510: regulation of unidimensional cell growth5.23E-03
86GO:0008610: lipid biosynthetic process6.08E-03
87GO:0032508: DNA duplex unwinding6.08E-03
88GO:0005975: carbohydrate metabolic process6.09E-03
89GO:0010027: thylakoid membrane organization6.10E-03
90GO:0009416: response to light stimulus6.70E-03
91GO:0042128: nitrate assimilation6.81E-03
92GO:0032544: plastid translation6.98E-03
93GO:0009808: lignin metabolic process6.98E-03
94GO:0009932: cell tip growth6.98E-03
95GO:0090305: nucleic acid phosphodiester bond hydrolysis7.91E-03
96GO:0009051: pentose-phosphate shunt, oxidative branch7.91E-03
97GO:0009407: toxin catabolic process8.79E-03
98GO:0009638: phototropism8.89E-03
99GO:0006779: porphyrin-containing compound biosynthetic process8.89E-03
100GO:0006782: protoporphyrinogen IX biosynthetic process9.92E-03
101GO:0006535: cysteine biosynthetic process from serine9.92E-03
102GO:0043069: negative regulation of programmed cell death9.92E-03
103GO:0048829: root cap development9.92E-03
104GO:0009073: aromatic amino acid family biosynthetic process1.10E-02
105GO:0048765: root hair cell differentiation1.10E-02
106GO:0009684: indoleacetic acid biosynthetic process1.10E-02
107GO:0010015: root morphogenesis1.10E-02
108GO:0000038: very long-chain fatty acid metabolic process1.10E-02
109GO:0030001: metal ion transport1.15E-02
110GO:0006820: anion transport1.21E-02
111GO:0010152: pollen maturation1.21E-02
112GO:0008361: regulation of cell size1.21E-02
113GO:0009640: photomorphogenesis1.31E-02
114GO:0009926: auxin polar transport1.31E-02
115GO:0006006: glucose metabolic process1.32E-02
116GO:0050826: response to freezing1.32E-02
117GO:0009767: photosynthetic electron transport chain1.32E-02
118GO:0010540: basipetal auxin transport1.44E-02
119GO:0048768: root hair cell tip growth1.44E-02
120GO:0009636: response to toxic substance1.47E-02
121GO:0005985: sucrose metabolic process1.56E-02
122GO:0010030: positive regulation of seed germination1.56E-02
123GO:0070588: calcium ion transmembrane transport1.56E-02
124GO:0009734: auxin-activated signaling pathway1.61E-02
125GO:0009664: plant-type cell wall organization1.64E-02
126GO:0009658: chloroplast organization1.66E-02
127GO:0000027: ribosomal large subunit assembly1.82E-02
128GO:0051017: actin filament bundle assembly1.82E-02
129GO:0005992: trehalose biosynthetic process1.82E-02
130GO:0019344: cysteine biosynthetic process1.82E-02
131GO:0006857: oligopeptide transport1.89E-02
132GO:0003333: amino acid transmembrane transport2.08E-02
133GO:0048511: rhythmic process2.08E-02
134GO:0035428: hexose transmembrane transport2.22E-02
135GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.37E-02
136GO:0046777: protein autophosphorylation2.37E-02
137GO:0009411: response to UV2.37E-02
138GO:0006012: galactose metabolic process2.37E-02
139GO:0042127: regulation of cell proliferation2.51E-02
140GO:0009306: protein secretion2.51E-02
141GO:0015979: photosynthesis2.57E-02
142GO:0009789: positive regulation of abscisic acid-activated signaling pathway2.66E-02
143GO:0009733: response to auxin2.75E-02
144GO:0042391: regulation of membrane potential2.81E-02
145GO:0080022: primary root development2.81E-02
146GO:0000413: protein peptidyl-prolyl isomerization2.81E-02
147GO:0042631: cellular response to water deprivation2.81E-02
148GO:0046323: glucose import2.96E-02
149GO:0009741: response to brassinosteroid2.96E-02
150GO:0007165: signal transduction3.09E-02
151GO:0042752: regulation of circadian rhythm3.12E-02
152GO:0009791: post-embryonic development3.28E-02
153GO:0071554: cell wall organization or biogenesis3.44E-02
154GO:0002229: defense response to oomycetes3.44E-02
155GO:0048235: pollen sperm cell differentiation3.61E-02
156GO:0030163: protein catabolic process3.78E-02
157GO:0009639: response to red or far red light3.95E-02
158GO:0009828: plant-type cell wall loosening3.95E-02
159GO:0009567: double fertilization forming a zygote and endosperm3.95E-02
160GO:0006810: transport4.28E-02
161GO:0007623: circadian rhythm4.34E-02
162GO:0016126: sterol biosynthetic process4.47E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0038198: auxin receptor activity0.00E+00
3GO:0043864: indoleacetamide hydrolase activity0.00E+00
4GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
5GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
6GO:0004852: uroporphyrinogen-III synthase activity0.00E+00
7GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
8GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
9GO:0050614: delta24-sterol reductase activity0.00E+00
10GO:0005222: intracellular cAMP activated cation channel activity0.00E+00
11GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
12GO:0005528: FK506 binding1.36E-07
13GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.09E-06
14GO:0016851: magnesium chelatase activity4.12E-05
15GO:0010011: auxin binding7.33E-05
16GO:0015250: water channel activity8.25E-05
17GO:0008200: ion channel inhibitor activity1.66E-04
18GO:0019843: rRNA binding2.09E-04
19GO:0080132: fatty acid alpha-hydroxylase activity3.42E-04
20GO:0005221: intracellular cyclic nucleotide activated cation channel activity3.42E-04
21GO:0000248: C-5 sterol desaturase activity3.42E-04
22GO:0000170: sphingosine hydroxylase activity3.42E-04
23GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.42E-04
24GO:0016762: xyloglucan:xyloglucosyl transferase activity4.99E-04
25GO:0042284: sphingolipid delta-4 desaturase activity7.45E-04
26GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity7.45E-04
27GO:0000822: inositol hexakisphosphate binding7.45E-04
28GO:0016868: intramolecular transferase activity, phosphotransferases7.45E-04
29GO:0003839: gamma-glutamylcyclotransferase activity7.45E-04
30GO:0003938: IMP dehydrogenase activity7.45E-04
31GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds9.62E-04
32GO:0016798: hydrolase activity, acting on glycosyl bonds9.77E-04
33GO:0005262: calcium channel activity1.11E-03
34GO:0016531: copper chaperone activity1.21E-03
35GO:0019829: cation-transporting ATPase activity1.21E-03
36GO:0050734: hydroxycinnamoyltransferase activity1.21E-03
37GO:0004075: biotin carboxylase activity1.21E-03
38GO:0030267: glyoxylate reductase (NADP) activity1.21E-03
39GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.55E-03
40GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.55E-03
41GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.55E-03
42GO:0043023: ribosomal large subunit binding1.74E-03
43GO:0001872: (1->3)-beta-D-glucan binding1.74E-03
44GO:0010328: auxin influx transmembrane transporter activity2.33E-03
45GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.33E-03
46GO:0009044: xylan 1,4-beta-xylosidase activity2.33E-03
47GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity2.33E-03
48GO:0046556: alpha-L-arabinofuranosidase activity2.33E-03
49GO:0004345: glucose-6-phosphate dehydrogenase activity2.33E-03
50GO:0016836: hydro-lyase activity2.33E-03
51GO:0015293: symporter activity2.39E-03
52GO:0009922: fatty acid elongase activity2.98E-03
53GO:0017137: Rab GTPase binding2.98E-03
54GO:0004040: amidase activity2.98E-03
55GO:0003989: acetyl-CoA carboxylase activity2.98E-03
56GO:0008381: mechanically-gated ion channel activity2.98E-03
57GO:0004366: glycerol-3-phosphate O-acyltransferase activity3.68E-03
58GO:0042578: phosphoric ester hydrolase activity3.68E-03
59GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.68E-03
60GO:0004017: adenylate kinase activity4.43E-03
61GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity4.43E-03
62GO:0005261: cation channel activity4.43E-03
63GO:0009927: histidine phosphotransfer kinase activity4.43E-03
64GO:0005242: inward rectifier potassium channel activity4.43E-03
65GO:0004124: cysteine synthase activity4.43E-03
66GO:0051920: peroxiredoxin activity4.43E-03
67GO:0016491: oxidoreductase activity4.48E-03
68GO:0016746: transferase activity, transferring acyl groups4.91E-03
69GO:0004427: inorganic diphosphatase activity5.23E-03
70GO:0043295: glutathione binding5.23E-03
71GO:0005200: structural constituent of cytoskeleton5.43E-03
72GO:0004034: aldose 1-epimerase activity6.08E-03
73GO:0004033: aldo-keto reductase (NADP) activity6.08E-03
74GO:0004564: beta-fructofuranosidase activity6.08E-03
75GO:0016209: antioxidant activity6.08E-03
76GO:0005375: copper ion transmembrane transporter activity6.98E-03
77GO:0008236: serine-type peptidase activity7.57E-03
78GO:0005096: GTPase activator activity8.37E-03
79GO:0004575: sucrose alpha-glucosidase activity8.89E-03
80GO:0005381: iron ion transmembrane transporter activity8.89E-03
81GO:0005384: manganese ion transmembrane transporter activity8.89E-03
82GO:0005215: transporter activity9.26E-03
83GO:0004805: trehalose-phosphatase activity9.92E-03
84GO:0003993: acid phosphatase activity1.06E-02
85GO:0008378: galactosyltransferase activity1.21E-02
86GO:0004364: glutathione transferase activity1.25E-02
87GO:0004565: beta-galactosidase activity1.32E-02
88GO:0010329: auxin efflux transmembrane transporter activity1.32E-02
89GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.32E-02
90GO:0004022: alcohol dehydrogenase (NAD) activity1.32E-02
91GO:0004089: carbonate dehydratase activity1.32E-02
92GO:0015095: magnesium ion transmembrane transporter activity1.32E-02
93GO:0031072: heat shock protein binding1.32E-02
94GO:0030552: cAMP binding1.56E-02
95GO:0030553: cGMP binding1.56E-02
96GO:0005216: ion channel activity1.95E-02
97GO:0005506: iron ion binding2.20E-02
98GO:0004650: polygalacturonase activity2.30E-02
99GO:0030570: pectate lyase activity2.37E-02
100GO:0022891: substrate-specific transmembrane transporter activity2.37E-02
101GO:0052689: carboxylic ester hydrolase activity2.47E-02
102GO:0003756: protein disulfide isomerase activity2.51E-02
103GO:0008514: organic anion transmembrane transporter activity2.51E-02
104GO:0030551: cyclic nucleotide binding2.81E-02
105GO:0004871: signal transducer activity2.89E-02
106GO:0005355: glucose transmembrane transporter activity3.12E-02
107GO:0016853: isomerase activity3.12E-02
108GO:0016829: lyase activity3.41E-02
109GO:0004252: serine-type endopeptidase activity3.50E-02
110GO:0004518: nuclease activity3.61E-02
111GO:0051015: actin filament binding3.78E-02
112GO:0016791: phosphatase activity3.95E-02
113GO:0016722: oxidoreductase activity, oxidizing metal ions4.12E-02
114GO:0005516: calmodulin binding4.12E-02
115GO:0016597: amino acid binding4.30E-02
116GO:0016413: O-acetyltransferase activity4.30E-02
117GO:0016168: chlorophyll binding4.65E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.05E-16
2GO:0009570: chloroplast stroma7.05E-15
3GO:0009543: chloroplast thylakoid lumen2.78E-10
4GO:0009534: chloroplast thylakoid8.69E-10
5GO:0009535: chloroplast thylakoid membrane9.97E-09
6GO:0009941: chloroplast envelope1.00E-08
7GO:0031977: thylakoid lumen1.50E-06
8GO:0016020: membrane1.58E-06
9GO:0005886: plasma membrane1.35E-05
10GO:0010007: magnesium chelatase complex1.87E-05
11GO:0009505: plant-type cell wall2.53E-05
12GO:0005618: cell wall1.74E-04
13GO:0009533: chloroplast stromal thylakoid2.93E-04
14GO:0043674: columella3.42E-04
15GO:0048046: apoplast3.77E-04
16GO:0031225: anchored component of membrane4.06E-04
17GO:0045298: tubulin complex5.41E-04
18GO:0046658: anchored component of plasma membrane6.44E-04
19GO:0009579: thylakoid7.76E-04
20GO:0009506: plasmodesma9.94E-04
21GO:0005887: integral component of plasma membrane1.11E-03
22GO:0009509: chromoplast1.21E-03
23GO:0031969: chloroplast membrane1.23E-03
24GO:0032432: actin filament bundle1.74E-03
25GO:0009531: secondary cell wall1.74E-03
26GO:0005775: vacuolar lumen1.74E-03
27GO:0016021: integral component of membrane2.07E-03
28GO:0005576: extracellular region3.06E-03
29GO:0042807: central vacuole5.23E-03
30GO:0009986: cell surface5.23E-03
31GO:0010287: plastoglobule5.88E-03
32GO:0000151: ubiquitin ligase complex7.97E-03
33GO:0005884: actin filament1.10E-02
34GO:0032040: small-subunit processome1.21E-02
35GO:0005773: vacuole1.69E-02
36GO:0005789: endoplasmic reticulum membrane1.73E-02
37GO:0042651: thylakoid membrane1.95E-02
38GO:0009536: plastid3.18E-02
39GO:0009523: photosystem II3.28E-02
40GO:0009705: plant-type vacuole membrane4.34E-02
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Gene type



Gene DE type