co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G33430

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090071: negative regulation of ribosome biogenesis	0.00E+00
2	GO:0042026: protein refolding	3.91E-09
3	GO:1901259: chloroplast rRNA processing	3.91E-09
4	GO:0007005: mitochondrion organization	3.60E-07
5	GO:0042793: transcription from plastid promoter	1.42E-06
6	GO:0006458: 'de novo' protein folding	2.09E-06
7	GO:0009658: chloroplast organization	4.02E-06
8	GO:0031425: chloroplast RNA processing	8.25E-06
9	GO:0010020: chloroplast fission	1.99E-05
10	GO:0061077: chaperone-mediated protein folding	3.77E-05
11	GO:2000071: regulation of defense response by callose deposition	4.85E-05
12	GO:0043572: plastid fission	1.30E-04
13	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.30E-04
14	GO:0006571: tyrosine biosynthetic process	1.30E-04
15	GO:0051085: chaperone mediated protein folding requiring cofactor	1.30E-04
16	GO:0009902: chloroplast relocation	1.78E-04
17	GO:0045727: positive regulation of translation	1.78E-04
18	GO:0017148: negative regulation of translation	3.42E-04
19	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.64E-04
20	GO:0009657: plastid organization	5.27E-04
21	GO:0019430: removal of superoxide radicals	5.27E-04
22	GO:1900865: chloroplast RNA modification	6.61E-04
23	GO:0006457: protein folding	7.27E-04
24	GO:0009790: embryo development	7.83E-04
25	GO:0009682: induced systemic resistance	8.02E-04
26	GO:0009451: RNA modification	9.38E-04
27	GO:0006418: tRNA aminoacylation for protein translation	1.35E-03
28	GO:0007017: microtubule-based process	1.35E-03
29	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.52E-03
30	GO:0010501: RNA secondary structure unwinding	1.89E-03
31	GO:0010118: stomatal movement	1.89E-03
32	GO:0006662: glycerol ether metabolic process	1.99E-03
33	GO:0002229: defense response to oomycetes	2.29E-03
34	GO:0009627: systemic acquired resistance	3.16E-03
35	GO:0008219: cell death	3.51E-03
36	GO:0009637: response to blue light	4.13E-03
37	GO:0009867: jasmonic acid mediated signaling pathway	4.13E-03
38	GO:0034599: cellular response to oxidative stress	4.26E-03
39	GO:0031347: regulation of defense response	5.60E-03
40	GO:0009620: response to fungus	7.22E-03
41	GO:0006633: fatty acid biosynthetic process	1.06E-02
42	GO:0006952: defense response	1.10E-02
43	GO:0009409: response to cold	1.21E-02
44	GO:0007049: cell cycle	1.66E-02
45	GO:0045454: cell redox homeostasis	2.03E-02
46	GO:0009793: embryo development ending in seed dormancy	2.07E-02
47	GO:0006397: mRNA processing	2.43E-02
48	GO:0055114: oxidation-reduction process	2.96E-02
49	GO:0009735: response to cytokinin	3.33E-02
50	GO:0009738: abscisic acid-activated signaling pathway	3.47E-02
51	GO:0045893: positive regulation of transcription, DNA-templated	3.92E-02
52	GO:0006414: translational elongation	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0044183: protein binding involved in protein folding	5.42E-08
2	GO:0051082: unfolded protein binding	4.58E-07
3	GO:0004665: prephenate dehydrogenase (NADP+) activity	1.87E-05
4	GO:0008977: prephenate dehydrogenase (NAD+) activity	1.87E-05
5	GO:0033730: arogenate dehydrogenase (NADP+) activity	1.87E-05
6	GO:0004312: fatty acid synthase activity	4.85E-05
7	GO:0000774: adenyl-nucleotide exchange factor activity	4.85E-05
8	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	8.61E-05
9	GO:0070180: large ribosomal subunit rRNA binding	8.61E-05
10	GO:0043023: ribosomal large subunit binding	1.30E-04
11	GO:0016773: phosphotransferase activity, alcohol group as acceptor	2.30E-04
12	GO:0004784: superoxide dismutase activity	2.85E-04
13	GO:0000049: tRNA binding	8.75E-04
14	GO:0051087: chaperone binding	1.35E-03
15	GO:0047134: protein-disulfide reductase activity	1.80E-03
16	GO:0004812: aminoacyl-tRNA ligase activity	1.80E-03
17	GO:0003729: mRNA binding	2.07E-03
18	GO:0004791: thioredoxin-disulfide reductase activity	2.09E-03
19	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.50E-03
20	GO:0004519: endonuclease activity	2.72E-03
21	GO:0004004: ATP-dependent RNA helicase activity	3.28E-03
22	GO:0003723: RNA binding	3.78E-03
23	GO:0016887: ATPase activity	3.85E-03
24	GO:0003746: translation elongation factor activity	4.13E-03
25	GO:0043621: protein self-association	5.18E-03
26	GO:0005198: structural molecule activity	5.32E-03
27	GO:0003690: double-stranded DNA binding	6.17E-03
28	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	6.91E-03
29	GO:0005525: GTP binding	7.22E-03
30	GO:0015035: protein disulfide oxidoreductase activity	7.85E-03
31	GO:0008026: ATP-dependent helicase activity	8.01E-03
32	GO:0042802: identical protein binding	1.34E-02
33	GO:0004601: peroxidase activity	1.54E-02
34	GO:0042803: protein homodimerization activity	2.10E-02
35	GO:0003924: GTPase activity	2.36E-02
36	GO:0005515: protein binding	3.00E-02
37	GO:0000166: nucleotide binding	3.55E-02
38	GO:0005507: copper ion binding	4.57E-02
39	GO:0005524: ATP binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	0.00E+00
2	GO:0009570: chloroplast stroma	4.41E-12
3	GO:0009295: nucleoid	1.37E-08
4	GO:0042644: chloroplast nucleoid	2.17E-08
5	GO:0042646: plastid nucleoid	2.68E-07
6	GO:0009579: thylakoid	3.12E-06
7	GO:0009941: chloroplast envelope	3.70E-06
8	GO:0022626: cytosolic ribosome	4.99E-04
9	GO:0009508: plastid chromosome	9.49E-04
10	GO:0010319: stromule	2.72E-03
11	GO:0030529: intracellular ribonucleoprotein complex	2.94E-03
12	GO:0009706: chloroplast inner membrane	7.69E-03
13	GO:0005759: mitochondrial matrix	1.06E-02
14	GO:0009536: plastid	1.09E-02
15	GO:0005874: microtubule	1.75E-02
16	GO:0016020: membrane	2.28E-02
17	GO:0048046: apoplast	3.25E-02
18	GO:0009534: chloroplast thylakoid	4.07E-02