co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019307: mannose biosynthetic process	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0045047: protein targeting to ER	0.00E+00
4	GO:0039694: viral RNA genome replication	0.00E+00
5	GO:0006457: protein folding	1.49E-12
6	GO:0034976: response to endoplasmic reticulum stress	5.81E-11
7	GO:0009617: response to bacterium	1.52E-08
8	GO:0006099: tricarboxylic acid cycle	4.20E-08
9	GO:0046686: response to cadmium ion	6.19E-08
10	GO:0045454: cell redox homeostasis	2.08E-07
11	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	1.38E-06
12	GO:0006102: isocitrate metabolic process	1.89E-06
13	GO:0009697: salicylic acid biosynthetic process	3.58E-05
14	GO:0042742: defense response to bacterium	4.54E-05
15	GO:0009306: protein secretion	6.48E-05
16	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	7.42E-05
17	GO:0000302: response to reactive oxygen species	1.27E-04
18	GO:0006605: protein targeting	1.27E-04
19	GO:0030968: endoplasmic reticulum unfolded protein response	1.59E-04
20	GO:0009553: embryo sac development	1.61E-04
21	GO:0042964: thioredoxin reduction	1.69E-04
22	GO:0046244: salicylic acid catabolic process	1.69E-04
23	GO:0034975: protein folding in endoplasmic reticulum	1.69E-04
24	GO:1990641: response to iron ion starvation	1.69E-04
25	GO:0043687: post-translational protein modification	1.69E-04
26	GO:0051775: response to redox state	1.69E-04
27	GO:0009555: pollen development	2.36E-04
28	GO:0006979: response to oxidative stress	2.48E-04
29	GO:0009651: response to salt stress	3.65E-04
30	GO:0006101: citrate metabolic process	3.83E-04
31	GO:0044419: interspecies interaction between organisms	3.83E-04
32	GO:0000162: tryptophan biosynthetic process	5.87E-04
33	GO:0006013: mannose metabolic process	6.25E-04
34	GO:0055074: calcium ion homeostasis	6.25E-04
35	GO:0031348: negative regulation of defense response	8.55E-04
36	GO:0010116: positive regulation of abscisic acid biosynthetic process	8.93E-04
37	GO:0009298: GDP-mannose biosynthetic process	8.93E-04
38	GO:0002239: response to oomycetes	8.93E-04
39	GO:0072334: UDP-galactose transmembrane transport	8.93E-04
40	GO:0048316: seed development	1.08E-03
41	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.18E-03
42	GO:0010197: polar nucleus fusion	1.26E-03
43	GO:0018279: protein N-linked glycosylation via asparagine	1.50E-03
44	GO:0006564: L-serine biosynthetic process	1.50E-03
45	GO:0006097: glyoxylate cycle	1.50E-03
46	GO:0006465: signal peptide processing	1.50E-03
47	GO:0034052: positive regulation of plant-type hypersensitive response	1.50E-03
48	GO:0000304: response to singlet oxygen	1.50E-03
49	GO:0015031: protein transport	1.61E-03
50	GO:0047484: regulation of response to osmotic stress	1.85E-03
51	GO:0010256: endomembrane system organization	1.85E-03
52	GO:0000741: karyogamy	1.85E-03
53	GO:0009567: double fertilization forming a zygote and endosperm	1.87E-03
54	GO:0009648: photoperiodism	2.22E-03
55	GO:0009423: chorismate biosynthetic process	2.22E-03
56	GO:0042372: phylloquinone biosynthetic process	2.22E-03
57	GO:1902074: response to salt	2.61E-03
58	GO:0050821: protein stabilization	3.02E-03
59	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.02E-03
60	GO:0030091: protein repair	3.02E-03
61	GO:0006499: N-terminal protein myristoylation	3.18E-03
62	GO:0006367: transcription initiation from RNA polymerase II promoter	3.46E-03
63	GO:0010120: camalexin biosynthetic process	3.46E-03
64	GO:0019430: removal of superoxide radicals	3.46E-03
65	GO:0010112: regulation of systemic acquired resistance	3.91E-03
66	GO:0015780: nucleotide-sugar transport	3.91E-03
67	GO:0098656: anion transmembrane transport	3.91E-03
68	GO:0007338: single fertilization	3.91E-03
69	GO:0046685: response to arsenic-containing substance	3.91E-03
70	GO:0010205: photoinhibition	4.38E-03
71	GO:0043067: regulation of programmed cell death	4.38E-03
72	GO:0009073: aromatic amino acid family biosynthetic process	5.38E-03
73	GO:0009682: induced systemic resistance	5.38E-03
74	GO:0052544: defense response by callose deposition in cell wall	5.38E-03
75	GO:0009846: pollen germination	5.89E-03
76	GO:0006790: sulfur compound metabolic process	5.91E-03
77	GO:0006820: anion transport	5.91E-03
78	GO:0006486: protein glycosylation	6.32E-03
79	GO:0010075: regulation of meristem growth	6.46E-03
80	GO:0006094: gluconeogenesis	6.46E-03
81	GO:0009934: regulation of meristem structural organization	7.02E-03
82	GO:0006541: glutamine metabolic process	7.02E-03
83	GO:0046688: response to copper ion	7.60E-03
84	GO:0019853: L-ascorbic acid biosynthetic process	7.60E-03
85	GO:0046854: phosphatidylinositol phosphorylation	7.60E-03
86	GO:0009620: response to fungus	8.22E-03
87	GO:0080147: root hair cell development	8.81E-03
88	GO:0006487: protein N-linked glycosylation	8.81E-03
89	GO:0006825: copper ion transport	9.44E-03
90	GO:0009751: response to salicylic acid	9.56E-03
91	GO:0009408: response to heat	9.73E-03
92	GO:0030433: ubiquitin-dependent ERAD pathway	1.08E-02
93	GO:0019748: secondary metabolic process	1.08E-02
94	GO:0010227: floral organ abscission	1.14E-02
95	GO:0009561: megagametogenesis	1.21E-02
96	GO:0008033: tRNA processing	1.36E-02
97	GO:0010501: RNA secondary structure unwinding	1.36E-02
98	GO:0000413: protein peptidyl-prolyl isomerization	1.36E-02
99	GO:0010118: stomatal movement	1.36E-02
100	GO:0048868: pollen tube development	1.43E-02
101	GO:0010154: fruit development	1.43E-02
102	GO:0010150: leaf senescence	1.56E-02
103	GO:0009851: auxin biosynthetic process	1.58E-02
104	GO:0080156: mitochondrial mRNA modification	1.66E-02
105	GO:0002229: defense response to oomycetes	1.66E-02
106	GO:0010193: response to ozone	1.66E-02
107	GO:0009630: gravitropism	1.74E-02
108	GO:0007264: small GTPase mediated signal transduction	1.74E-02
109	GO:0007166: cell surface receptor signaling pathway	1.79E-02
110	GO:0009735: response to cytokinin	1.80E-02
111	GO:0030163: protein catabolic process	1.82E-02
112	GO:0006464: cellular protein modification process	1.90E-02
113	GO:0016126: sterol biosynthetic process	2.16E-02
114	GO:0055114: oxidation-reduction process	2.23E-02
115	GO:0009627: systemic acquired resistance	2.33E-02
116	GO:0006906: vesicle fusion	2.33E-02
117	GO:0016311: dephosphorylation	2.51E-02
118	GO:0016049: cell growth	2.51E-02
119	GO:0009817: defense response to fungus, incompatible interaction	2.61E-02
120	GO:0009407: toxin catabolic process	2.79E-02
121	GO:0010043: response to zinc ion	2.89E-02
122	GO:0045087: innate immune response	3.08E-02
123	GO:0006887: exocytosis	3.49E-02
124	GO:0042542: response to hydrogen peroxide	3.59E-02
125	GO:0009744: response to sucrose	3.69E-02
126	GO:0006886: intracellular protein transport	3.70E-02
127	GO:0042546: cell wall biogenesis	3.80E-02
128	GO:0009644: response to high light intensity	3.91E-02
129	GO:0000154: rRNA modification	4.01E-02
130	GO:0009636: response to toxic substance	4.01E-02
131	GO:0006855: drug transmembrane transport	4.12E-02
132	GO:0009793: embryo development ending in seed dormancy	4.81E-02
133	GO:0006417: regulation of translation	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
2	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	0.00E+00
3	GO:0004615: phosphomannomutase activity	0.00E+00
4	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0004107: chorismate synthase activity	0.00E+00
7	GO:0004631: phosphomevalonate kinase activity	0.00E+00
8	GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity	0.00E+00
9	GO:0003756: protein disulfide isomerase activity	4.28E-10
10	GO:0051082: unfolded protein binding	6.53E-07
11	GO:0005460: UDP-glucose transmembrane transporter activity	1.19E-05
12	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.19E-05
13	GO:0016004: phospholipase activator activity	2.20E-05
14	GO:0005459: UDP-galactose transmembrane transporter activity	3.58E-05
15	GO:0005507: copper ion binding	9.90E-05
16	GO:0048037: cofactor binding	1.69E-04
17	GO:0008909: isochorismate synthase activity	1.69E-04
18	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.69E-04
19	GO:0033984: indole-3-glycerol-phosphate lyase activity	1.69E-04
20	GO:0004776: succinate-CoA ligase (GDP-forming) activity	3.83E-04
21	GO:0004617: phosphoglycerate dehydrogenase activity	3.83E-04
22	GO:0003994: aconitate hydratase activity	3.83E-04
23	GO:0004775: succinate-CoA ligase (ADP-forming) activity	3.83E-04
24	GO:0048531: beta-1,3-galactosyltransferase activity	3.83E-04
25	GO:0003746: translation elongation factor activity	4.19E-04
26	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.25E-04
27	GO:0004383: guanylate cyclase activity	6.25E-04
28	GO:0004049: anthranilate synthase activity	6.25E-04
29	GO:0000030: mannosyltransferase activity	6.25E-04
30	GO:0016531: copper chaperone activity	6.25E-04
31	GO:0004148: dihydrolipoyl dehydrogenase activity	6.25E-04
32	GO:0005525: GTP binding	6.66E-04
33	GO:0051287: NAD binding	7.37E-04
34	GO:0005509: calcium ion binding	8.56E-04
35	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	8.93E-04
36	GO:0008233: peptidase activity	1.09E-03
37	GO:0004576: oligosaccharyl transferase activity	1.18E-03
38	GO:0004834: tryptophan synthase activity	1.18E-03
39	GO:0015035: protein disulfide oxidoreductase activity	1.35E-03
40	GO:0010181: FMN binding	1.35E-03
41	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	1.50E-03
42	GO:0004656: procollagen-proline 4-dioxygenase activity	2.22E-03
43	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	2.22E-03
44	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	2.22E-03
45	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.22E-03
46	GO:0008121: ubiquinol-cytochrome-c reductase activity	2.61E-03
47	GO:0030247: polysaccharide binding	2.61E-03
48	GO:0030515: snoRNA binding	2.61E-03
49	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.89E-03
50	GO:0015288: porin activity	3.02E-03
51	GO:0050897: cobalt ion binding	3.33E-03
52	GO:0008135: translation factor activity, RNA binding	3.46E-03
53	GO:0008308: voltage-gated anion channel activity	3.46E-03
54	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.65E-03
55	GO:0051539: 4 iron, 4 sulfur cluster binding	4.15E-03
56	GO:0004129: cytochrome-c oxidase activity	5.38E-03
57	GO:0030246: carbohydrate binding	7.57E-03
58	GO:0004190: aspartic-type endopeptidase activity	7.60E-03
59	GO:0031418: L-ascorbic acid binding	8.81E-03
60	GO:0016746: transferase activity, transferring acyl groups	9.27E-03
61	GO:0004298: threonine-type endopeptidase activity	1.01E-02
62	GO:0004791: thioredoxin-disulfide reductase activity	1.51E-02
63	GO:0016853: isomerase activity	1.51E-02
64	GO:0005524: ATP binding	1.67E-02
65	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.82E-02
66	GO:0008237: metallopeptidase activity	1.99E-02
67	GO:0000166: nucleotide binding	2.01E-02
68	GO:0016597: amino acid binding	2.07E-02
69	GO:0051213: dioxygenase activity	2.16E-02
70	GO:0004674: protein serine/threonine kinase activity	2.24E-02
71	GO:0004004: ATP-dependent RNA helicase activity	2.42E-02
72	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.51E-02
73	GO:0003729: mRNA binding	2.54E-02
74	GO:0015238: drug transmembrane transporter activity	2.70E-02
75	GO:0003697: single-stranded DNA binding	3.08E-02
76	GO:0000149: SNARE binding	3.28E-02
77	GO:0050661: NADP binding	3.38E-02
78	GO:0004364: glutathione transferase activity	3.59E-02
79	GO:0005484: SNAP receptor activity	3.69E-02
80	GO:0051537: 2 iron, 2 sulfur cluster binding	3.91E-02
81	GO:0043621: protein self-association	3.91E-02
82	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.12E-02
83	GO:0003924: GTPase activity	4.41E-02
84	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	4.57E-02
85	GO:0009055: electron carrier activity	4.73E-02
86	GO:0016301: kinase activity	4.75E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0045252: oxoglutarate dehydrogenase complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0005783: endoplasmic reticulum	1.84E-19
5	GO:0005788: endoplasmic reticulum lumen	3.26E-16
6	GO:0005774: vacuolar membrane	5.74E-07
7	GO:0009507: chloroplast	1.34E-05
8	GO:0005739: mitochondrion	7.17E-05
9	GO:0005789: endoplasmic reticulum membrane	1.61E-04
10	GO:0005787: signal peptidase complex	1.69E-04
11	GO:0009536: plastid	3.96E-04
12	GO:0030176: integral component of endoplasmic reticulum membrane	5.27E-04
13	GO:0005672: transcription factor TFIIA complex	6.25E-04
14	GO:0016020: membrane	7.59E-04
15	GO:0030660: Golgi-associated vesicle membrane	1.18E-03
16	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	1.18E-03
17	GO:0005746: mitochondrial respiratory chain	1.50E-03
18	GO:0008250: oligosaccharyltransferase complex	1.50E-03
19	GO:0016592: mediator complex	1.65E-03
20	GO:0031428: box C/D snoRNP complex	1.85E-03
21	GO:0032588: trans-Golgi network membrane	1.85E-03
22	GO:0030173: integral component of Golgi membrane	2.22E-03
23	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	3.02E-03
24	GO:0000326: protein storage vacuole	3.46E-03
25	GO:0046930: pore complex	3.46E-03
26	GO:0019773: proteasome core complex, alpha-subunit complex	3.46E-03
27	GO:0005886: plasma membrane	3.88E-03
28	GO:0031090: organelle membrane	3.91E-03
29	GO:0031901: early endosome membrane	3.91E-03
30	GO:0005829: cytosol	4.86E-03
31	GO:0005740: mitochondrial envelope	4.87E-03
32	GO:0005794: Golgi apparatus	5.01E-03
33	GO:0005765: lysosomal membrane	5.38E-03
34	GO:0032040: small-subunit processome	5.91E-03
35	GO:0005750: mitochondrial respiratory chain complex III	7.02E-03
36	GO:0005834: heterotrimeric G-protein complex	7.97E-03
37	GO:0043234: protein complex	8.20E-03
38	GO:0005758: mitochondrial intermembrane space	8.81E-03
39	GO:0005741: mitochondrial outer membrane	1.01E-02
40	GO:0005839: proteasome core complex	1.01E-02
41	GO:0005623: cell	1.16E-02
42	GO:0009506: plasmodesma	1.24E-02
43	GO:0005759: mitochondrial matrix	1.42E-02
44	GO:0009505: plant-type cell wall	1.97E-02
45	GO:0016021: integral component of membrane	2.13E-02
46	GO:0005777: peroxisome	2.40E-02
47	GO:0005773: vacuole	2.58E-02
48	GO:0015934: large ribosomal subunit	2.89E-02
49	GO:0031969: chloroplast membrane	3.00E-02
50	GO:0031201: SNARE complex	3.49E-02
51	GO:0048046: apoplast	3.50E-02
52	GO:0005618: cell wall	4.03E-02
53	GO:0000502: proteasome complex	4.57E-02