GO Enrichment Analysis of Co-expressed Genes with
AT2G32440
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 2 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 3 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 4 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0017038: protein import | 0.00E+00 |
| 6 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 7 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 8 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 9 | GO:0010480: microsporocyte differentiation | 0.00E+00 |
| 10 | GO:0010205: photoinhibition | 1.45E-08 |
| 11 | GO:0010158: abaxial cell fate specification | 1.80E-05 |
| 12 | GO:1902183: regulation of shoot apical meristem development | 1.80E-05 |
| 13 | GO:0042549: photosystem II stabilization | 2.72E-05 |
| 14 | GO:0048437: floral organ development | 5.19E-05 |
| 15 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.23E-05 |
| 16 | GO:0010206: photosystem II repair | 1.05E-04 |
| 17 | GO:2000024: regulation of leaf development | 1.05E-04 |
| 18 | GO:0000373: Group II intron splicing | 1.05E-04 |
| 19 | GO:0051013: microtubule severing | 1.12E-04 |
| 20 | GO:0010450: inflorescence meristem growth | 1.12E-04 |
| 21 | GO:0000481: maturation of 5S rRNA | 1.12E-04 |
| 22 | GO:0043087: regulation of GTPase activity | 1.12E-04 |
| 23 | GO:0043609: regulation of carbon utilization | 1.12E-04 |
| 24 | GO:0034337: RNA folding | 1.12E-04 |
| 25 | GO:0009773: photosynthetic electron transport in photosystem I | 1.78E-04 |
| 26 | GO:0048229: gametophyte development | 1.78E-04 |
| 27 | GO:0010075: regulation of meristem growth | 2.36E-04 |
| 28 | GO:0035304: regulation of protein dephosphorylation | 2.61E-04 |
| 29 | GO:0009934: regulation of meristem structural organization | 2.68E-04 |
| 30 | GO:0009944: polarity specification of adaxial/abaxial axis | 3.73E-04 |
| 31 | GO:0006000: fructose metabolic process | 4.32E-04 |
| 32 | GO:0006013: mannose metabolic process | 4.32E-04 |
| 33 | GO:0006518: peptide metabolic process | 4.32E-04 |
| 34 | GO:0043617: cellular response to sucrose starvation | 4.32E-04 |
| 35 | GO:0045165: cell fate commitment | 4.32E-04 |
| 36 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 6.19E-04 |
| 37 | GO:0048653: anther development | 6.82E-04 |
| 38 | GO:0010154: fruit development | 7.34E-04 |
| 39 | GO:0009646: response to absence of light | 7.87E-04 |
| 40 | GO:0045727: positive regulation of translation | 8.23E-04 |
| 41 | GO:0010109: regulation of photosynthesis | 8.23E-04 |
| 42 | GO:0030163: protein catabolic process | 1.02E-03 |
| 43 | GO:0010256: endomembrane system organization | 1.27E-03 |
| 44 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.27E-03 |
| 45 | GO:0000470: maturation of LSU-rRNA | 1.27E-03 |
| 46 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 1.27E-03 |
| 47 | GO:0009228: thiamine biosynthetic process | 1.27E-03 |
| 48 | GO:0009913: epidermal cell differentiation | 1.27E-03 |
| 49 | GO:0006596: polyamine biosynthetic process | 1.27E-03 |
| 50 | GO:0048759: xylem vessel member cell differentiation | 1.27E-03 |
| 51 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.27E-03 |
| 52 | GO:0015995: chlorophyll biosynthetic process | 1.49E-03 |
| 53 | GO:0010067: procambium histogenesis | 1.52E-03 |
| 54 | GO:0009942: longitudinal axis specification | 1.52E-03 |
| 55 | GO:0009772: photosynthetic electron transport in photosystem II | 1.78E-03 |
| 56 | GO:0009416: response to light stimulus | 2.02E-03 |
| 57 | GO:0048564: photosystem I assembly | 2.06E-03 |
| 58 | GO:0006605: protein targeting | 2.06E-03 |
| 59 | GO:0032508: DNA duplex unwinding | 2.06E-03 |
| 60 | GO:0006468: protein phosphorylation | 2.14E-03 |
| 61 | GO:0006002: fructose 6-phosphate metabolic process | 2.35E-03 |
| 62 | GO:0032544: plastid translation | 2.35E-03 |
| 63 | GO:0010093: specification of floral organ identity | 2.35E-03 |
| 64 | GO:0009723: response to ethylene | 2.63E-03 |
| 65 | GO:0048507: meristem development | 2.66E-03 |
| 66 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 2.66E-03 |
| 67 | GO:0048589: developmental growth | 2.66E-03 |
| 68 | GO:0046777: protein autophosphorylation | 3.13E-03 |
| 69 | GO:0048829: root cap development | 3.30E-03 |
| 70 | GO:0015979: photosynthesis | 3.40E-03 |
| 71 | GO:0006364: rRNA processing | 3.59E-03 |
| 72 | GO:0019684: photosynthesis, light reaction | 3.65E-03 |
| 73 | GO:0010152: pollen maturation | 4.00E-03 |
| 74 | GO:0009767: photosynthetic electron transport chain | 4.36E-03 |
| 75 | GO:0010102: lateral root morphogenesis | 4.36E-03 |
| 76 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.36E-03 |
| 77 | GO:0006094: gluconeogenesis | 4.36E-03 |
| 78 | GO:0009933: meristem structural organization | 4.74E-03 |
| 79 | GO:0010207: photosystem II assembly | 4.74E-03 |
| 80 | GO:0010223: secondary shoot formation | 4.74E-03 |
| 81 | GO:0009825: multidimensional cell growth | 5.13E-03 |
| 82 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.52E-03 |
| 83 | GO:0006289: nucleotide-excision repair | 5.93E-03 |
| 84 | GO:0043622: cortical microtubule organization | 6.35E-03 |
| 85 | GO:0061077: chaperone-mediated protein folding | 6.78E-03 |
| 86 | GO:0016114: terpenoid biosynthetic process | 6.78E-03 |
| 87 | GO:0003333: amino acid transmembrane transport | 6.78E-03 |
| 88 | GO:0009733: response to auxin | 7.03E-03 |
| 89 | GO:0080092: regulation of pollen tube growth | 7.22E-03 |
| 90 | GO:0001944: vasculature development | 7.67E-03 |
| 91 | GO:0048443: stamen development | 8.13E-03 |
| 92 | GO:0010091: trichome branching | 8.13E-03 |
| 93 | GO:0010089: xylem development | 8.13E-03 |
| 94 | GO:0000226: microtubule cytoskeleton organization | 9.08E-03 |
| 95 | GO:0010051: xylem and phloem pattern formation | 9.08E-03 |
| 96 | GO:0010087: phloem or xylem histogenesis | 9.08E-03 |
| 97 | GO:0010305: leaf vascular tissue pattern formation | 9.57E-03 |
| 98 | GO:0048825: cotyledon development | 1.06E-02 |
| 99 | GO:0016032: viral process | 1.16E-02 |
| 100 | GO:0071281: cellular response to iron ion | 1.22E-02 |
| 101 | GO:0010090: trichome morphogenesis | 1.22E-02 |
| 102 | GO:0071805: potassium ion transmembrane transport | 1.33E-02 |
| 103 | GO:0009658: chloroplast organization | 1.37E-02 |
| 104 | GO:0009832: plant-type cell wall biogenesis | 1.80E-02 |
| 105 | GO:0006499: N-terminal protein myristoylation | 1.86E-02 |
| 106 | GO:0006865: amino acid transport | 1.99E-02 |
| 107 | GO:0045454: cell redox homeostasis | 2.03E-02 |
| 108 | GO:0009853: photorespiration | 2.06E-02 |
| 109 | GO:0030001: metal ion transport | 2.25E-02 |
| 110 | GO:0009926: auxin polar transport | 2.46E-02 |
| 111 | GO:0009744: response to sucrose | 2.46E-02 |
| 112 | GO:0006397: mRNA processing | 2.61E-02 |
| 113 | GO:0006855: drug transmembrane transport | 2.75E-02 |
| 114 | GO:0008152: metabolic process | 2.76E-02 |
| 115 | GO:0006813: potassium ion transport | 3.04E-02 |
| 116 | GO:0009909: regulation of flower development | 3.27E-02 |
| 117 | GO:0006096: glycolytic process | 3.43E-02 |
| 118 | GO:0009734: auxin-activated signaling pathway | 3.52E-02 |
| 119 | GO:0006810: transport | 3.84E-02 |
| 120 | GO:0018105: peptidyl-serine phosphorylation | 3.99E-02 |
| 121 | GO:0005975: carbohydrate metabolic process | 4.00E-02 |
| 122 | GO:0009735: response to cytokinin | 4.05E-02 |
| 123 | GO:0009845: seed germination | 4.85E-02 |
| 124 | GO:0055114: oxidation-reduction process | 4.93E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 2 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 3 | GO:0010487: thermospermine synthase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 6 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 7 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 8 | GO:0005515: protein binding | 1.02E-04 |
| 9 | GO:0010242: oxygen evolving activity | 1.12E-04 |
| 10 | GO:0045485: omega-6 fatty acid desaturase activity | 1.12E-04 |
| 11 | GO:0004856: xylulokinase activity | 1.12E-04 |
| 12 | GO:0008568: microtubule-severing ATPase activity | 1.12E-04 |
| 13 | GO:0016768: spermine synthase activity | 1.12E-04 |
| 14 | GO:0016301: kinase activity | 2.57E-04 |
| 15 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 2.61E-04 |
| 16 | GO:0008266: poly(U) RNA binding | 2.68E-04 |
| 17 | GO:0005528: FK506 binding | 3.73E-04 |
| 18 | GO:0005524: ATP binding | 3.84E-04 |
| 19 | GO:0015079: potassium ion transmembrane transporter activity | 4.13E-04 |
| 20 | GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity | 4.32E-04 |
| 21 | GO:0015462: ATPase-coupled protein transmembrane transporter activity | 4.32E-04 |
| 22 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.32E-04 |
| 23 | GO:0033612: receptor serine/threonine kinase binding | 4.53E-04 |
| 24 | GO:0019201: nucleotide kinase activity | 6.19E-04 |
| 25 | GO:0004672: protein kinase activity | 6.85E-04 |
| 26 | GO:0004674: protein serine/threonine kinase activity | 7.31E-04 |
| 27 | GO:0010011: auxin binding | 8.23E-04 |
| 28 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 8.23E-04 |
| 29 | GO:0008453: alanine-glyoxylate transaminase activity | 8.23E-04 |
| 30 | GO:0010328: auxin influx transmembrane transporter activity | 8.23E-04 |
| 31 | GO:0070628: proteasome binding | 8.23E-04 |
| 32 | GO:0004518: nuclease activity | 9.56E-04 |
| 33 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.04E-03 |
| 34 | GO:0004332: fructose-bisphosphate aldolase activity | 1.27E-03 |
| 35 | GO:0042578: phosphoric ester hydrolase activity | 1.27E-03 |
| 36 | GO:0031593: polyubiquitin binding | 1.27E-03 |
| 37 | GO:2001070: starch binding | 1.27E-03 |
| 38 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.52E-03 |
| 39 | GO:0004017: adenylate kinase activity | 1.52E-03 |
| 40 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.52E-03 |
| 41 | GO:0004559: alpha-mannosidase activity | 1.52E-03 |
| 42 | GO:0004222: metalloendopeptidase activity | 1.82E-03 |
| 43 | GO:0043022: ribosome binding | 2.06E-03 |
| 44 | GO:0035091: phosphatidylinositol binding | 2.89E-03 |
| 45 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.11E-03 |
| 46 | GO:0015386: potassium:proton antiporter activity | 3.65E-03 |
| 47 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 3.65E-03 |
| 48 | GO:0004565: beta-galactosidase activity | 4.36E-03 |
| 49 | GO:0043130: ubiquitin binding | 5.93E-03 |
| 50 | GO:0019843: rRNA binding | 6.38E-03 |
| 51 | GO:0003723: RNA binding | 6.40E-03 |
| 52 | GO:0004176: ATP-dependent peptidase activity | 6.78E-03 |
| 53 | GO:0046872: metal ion binding | 7.10E-03 |
| 54 | GO:0016491: oxidoreductase activity | 8.94E-03 |
| 55 | GO:0050662: coenzyme binding | 1.01E-02 |
| 56 | GO:0048038: quinone binding | 1.11E-02 |
| 57 | GO:0042802: identical protein binding | 1.12E-02 |
| 58 | GO:0003684: damaged DNA binding | 1.27E-02 |
| 59 | GO:0008237: metallopeptidase activity | 1.33E-02 |
| 60 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.56E-02 |
| 61 | GO:0004683: calmodulin-dependent protein kinase activity | 1.62E-02 |
| 62 | GO:0008236: serine-type peptidase activity | 1.68E-02 |
| 63 | GO:0015238: drug transmembrane transporter activity | 1.80E-02 |
| 64 | GO:0005096: GTPase activator activity | 1.80E-02 |
| 65 | GO:0050897: cobalt ion binding | 1.93E-02 |
| 66 | GO:0030145: manganese ion binding | 1.93E-02 |
| 67 | GO:0003746: translation elongation factor activity | 2.06E-02 |
| 68 | GO:0005509: calcium ion binding | 2.15E-02 |
| 69 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 2.19E-02 |
| 70 | GO:0043621: protein self-association | 2.60E-02 |
| 71 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.60E-02 |
| 72 | GO:0015293: symporter activity | 2.67E-02 |
| 73 | GO:0016298: lipase activity | 3.12E-02 |
| 74 | GO:0015171: amino acid transmembrane transporter activity | 3.27E-02 |
| 75 | GO:0008289: lipid binding | 3.48E-02 |
| 76 | GO:0003729: mRNA binding | 3.90E-02 |
| 77 | GO:0004252: serine-type endopeptidase activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043224: nuclear SCF ubiquitin ligase complex | 0.00E+00 |
| 2 | GO:0009535: chloroplast thylakoid membrane | 8.08E-12 |
| 3 | GO:0009507: chloroplast | 2.69E-10 |
| 4 | GO:0009534: chloroplast thylakoid | 3.90E-09 |
| 5 | GO:0009570: chloroplast stroma | 1.14E-08 |
| 6 | GO:0009941: chloroplast envelope | 1.13E-07 |
| 7 | GO:0009579: thylakoid | 9.19E-07 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 5.68E-06 |
| 9 | GO:0030095: chloroplast photosystem II | 6.99E-06 |
| 10 | GO:0009533: chloroplast stromal thylakoid | 5.19E-05 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.12E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 4.13E-04 |
| 13 | GO:0019898: extrinsic component of membrane | 8.42E-04 |
| 14 | GO:0005886: plasma membrane | 1.09E-03 |
| 15 | GO:0030529: intracellular ribonucleoprotein complex | 1.28E-03 |
| 16 | GO:0009538: photosystem I reaction center | 2.06E-03 |
| 17 | GO:0031977: thylakoid lumen | 2.47E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.66E-03 |
| 19 | GO:0016324: apical plasma membrane | 3.30E-03 |
| 20 | GO:0032040: small-subunit processome | 4.00E-03 |
| 21 | GO:0048046: apoplast | 4.09E-03 |
| 22 | GO:0009574: preprophase band | 4.36E-03 |
| 23 | GO:0010287: plastoglobule | 6.04E-03 |
| 24 | GO:0042651: thylakoid membrane | 6.35E-03 |
| 25 | GO:0009532: plastid stroma | 6.78E-03 |
| 26 | GO:0005759: mitochondrial matrix | 8.01E-03 |
| 27 | GO:0016020: membrane | 9.51E-03 |
| 28 | GO:0009523: photosystem II | 1.06E-02 |
| 29 | GO:0016021: integral component of membrane | 1.46E-02 |
| 30 | GO:0009505: plant-type cell wall | 3.16E-02 |
| 31 | GO:0005747: mitochondrial respiratory chain complex I | 3.51E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 3.91E-02 |
| 33 | GO:0005618: cell wall | 4.57E-02 |