co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G32100

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061635: regulation of protein complex stability	0.00E+00
2	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
3	GO:0061157: mRNA destabilization	0.00E+00
4	GO:0015822: ornithine transport	0.00E+00
5	GO:0090706: specification of plant organ position	0.00E+00
6	GO:0043953: protein transport by the Tat complex	1.02E-04
7	GO:0065002: intracellular protein transmembrane transport	1.02E-04
8	GO:0000066: mitochondrial ornithine transport	1.02E-04
9	GO:0010450: inflorescence meristem growth	1.02E-04
10	GO:0043085: positive regulation of catalytic activity	1.56E-04
11	GO:0006094: gluconeogenesis	2.09E-04
12	GO:0010207: photosystem II assembly	2.37E-04
13	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.40E-04
14	GO:0006521: regulation of cellular amino acid metabolic process	2.40E-04
15	GO:0030388: fructose 1,6-bisphosphate metabolic process	2.40E-04
16	GO:0009644: response to high light intensity	2.64E-04
17	GO:0006000: fructose metabolic process	3.99E-04
18	GO:0006013: mannose metabolic process	3.99E-04
19	GO:0006696: ergosterol biosynthetic process	3.99E-04
20	GO:0045165: cell fate commitment	3.99E-04
21	GO:2000082: regulation of L-ascorbic acid biosynthetic process	3.99E-04
22	GO:0001678: cellular glucose homeostasis	5.73E-04
23	GO:2001141: regulation of RNA biosynthetic process	5.73E-04
24	GO:1902476: chloride transmembrane transport	5.73E-04
25	GO:2000038: regulation of stomatal complex development	7.62E-04
26	GO:0010023: proanthocyanidin biosynthetic process	7.62E-04
27	GO:0045727: positive regulation of translation	7.62E-04
28	GO:0045038: protein import into chloroplast thylakoid membrane	9.62E-04
29	GO:1902183: regulation of shoot apical meristem development	9.62E-04
30	GO:0010158: abaxial cell fate specification	9.62E-04
31	GO:0032876: negative regulation of DNA endoreduplication	9.62E-04
32	GO:0030308: negative regulation of cell growth	9.62E-04
33	GO:0009267: cellular response to starvation	1.17E-03
34	GO:0000741: karyogamy	1.17E-03
35	GO:1902456: regulation of stomatal opening	1.17E-03
36	GO:0042549: photosystem II stabilization	1.17E-03
37	GO:0046835: carbohydrate phosphorylation	1.40E-03
38	GO:0010019: chloroplast-nucleus signaling pathway	1.40E-03
39	GO:2000037: regulation of stomatal complex patterning	1.40E-03
40	GO:0071333: cellular response to glucose stimulus	1.40E-03
41	GO:0006821: chloride transport	1.65E-03
42	GO:0009642: response to light intensity	1.90E-03
43	GO:0046620: regulation of organ growth	1.90E-03
44	GO:0006402: mRNA catabolic process	1.90E-03
45	GO:0030091: protein repair	1.90E-03
46	GO:0032544: plastid translation	2.17E-03
47	GO:0010093: specification of floral organ identity	2.17E-03
48	GO:0009932: cell tip growth	2.17E-03
49	GO:0006002: fructose 6-phosphate metabolic process	2.17E-03
50	GO:0071482: cellular response to light stimulus	2.17E-03
51	GO:0009723: response to ethylene	2.26E-03
52	GO:2000024: regulation of leaf development	2.45E-03
53	GO:0000373: Group II intron splicing	2.45E-03
54	GO:0010205: photoinhibition	2.74E-03
55	GO:0015979: photosynthesis	2.92E-03
56	GO:0009299: mRNA transcription	3.05E-03
57	GO:0006949: syncytium formation	3.05E-03
58	GO:0045454: cell redox homeostasis	3.10E-03
59	GO:0006352: DNA-templated transcription, initiation	3.36E-03
60	GO:0009750: response to fructose	3.36E-03
61	GO:0009698: phenylpropanoid metabolic process	3.36E-03
62	GO:0005983: starch catabolic process	3.69E-03
63	GO:0015706: nitrate transport	3.69E-03
64	GO:0008361: regulation of cell size	3.69E-03
65	GO:0006096: glycolytic process	3.77E-03
66	GO:2000028: regulation of photoperiodism, flowering	4.02E-03
67	GO:0009718: anthocyanin-containing compound biosynthetic process	4.02E-03
68	GO:0009725: response to hormone	4.02E-03
69	GO:0005986: sucrose biosynthetic process	4.02E-03
70	GO:0009933: meristem structural organization	4.37E-03
71	GO:0010167: response to nitrate	4.72E-03
72	GO:0009901: anther dehiscence	4.72E-03
73	GO:0010053: root epidermal cell differentiation	4.72E-03
74	GO:0009944: polarity specification of adaxial/abaxial axis	5.46E-03
75	GO:0080147: root hair cell development	5.46E-03
76	GO:0006418: tRNA aminoacylation for protein translation	5.85E-03
77	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	7.06E-03
78	GO:0006284: base-excision repair	7.48E-03
79	GO:0019722: calcium-mediated signaling	7.48E-03
80	GO:0010214: seed coat development	7.48E-03
81	GO:0009735: response to cytokinin	7.48E-03
82	GO:0007623: circadian rhythm	7.80E-03
83	GO:0016117: carotenoid biosynthetic process	7.91E-03
84	GO:0010087: phloem or xylem histogenesis	8.35E-03
85	GO:0042631: cellular response to water deprivation	8.35E-03
86	GO:0010154: fruit development	8.80E-03
87	GO:0006662: glycerol ether metabolic process	8.80E-03
88	GO:0010197: polar nucleus fusion	8.80E-03
89	GO:0010182: sugar mediated signaling pathway	8.80E-03
90	GO:0007018: microtubule-based movement	9.26E-03
91	GO:0009651: response to salt stress	9.34E-03
92	GO:0010090: trichome morphogenesis	1.12E-02
93	GO:0009826: unidimensional cell growth	1.16E-02
94	GO:0009828: plant-type cell wall loosening	1.17E-02
95	GO:0009567: double fertilization forming a zygote and endosperm	1.17E-02
96	GO:0071805: potassium ion transmembrane transport	1.22E-02
97	GO:0007267: cell-cell signaling	1.22E-02
98	GO:0006970: response to osmotic stress	1.30E-02
99	GO:0010027: thylakoid membrane organization	1.32E-02
100	GO:0042128: nitrate assimilation	1.43E-02
101	GO:0015995: chlorophyll biosynthetic process	1.48E-02
102	GO:0010411: xyloglucan metabolic process	1.48E-02
103	GO:0016311: dephosphorylation	1.54E-02
104	GO:0048481: plant ovule development	1.60E-02
105	GO:0018298: protein-chromophore linkage	1.60E-02
106	GO:0007568: aging	1.77E-02
107	GO:0034599: cellular response to oxidative stress	1.95E-02
108	GO:0006839: mitochondrial transport	2.07E-02
109	GO:0006979: response to oxidative stress	2.07E-02
110	GO:0009926: auxin polar transport	2.26E-02
111	GO:0009744: response to sucrose	2.26E-02
112	GO:0042546: cell wall biogenesis	2.33E-02
113	GO:0009664: plant-type cell wall organization	2.66E-02
114	GO:0006364: rRNA processing	2.80E-02
115	GO:0009585: red, far-red light phototransduction	2.80E-02
116	GO:0006813: potassium ion transport	2.80E-02
117	GO:0009909: regulation of flower development	3.01E-02
118	GO:0009626: plant-type hypersensitive response	3.30E-02
119	GO:0009740: gibberellic acid mediated signaling pathway	3.44E-02
120	GO:0005975: carbohydrate metabolic process	3.45E-02
121	GO:0042545: cell wall modification	3.52E-02
122	GO:0046686: response to cadmium ion	3.56E-02
123	GO:0009742: brassinosteroid mediated signaling pathway	3.75E-02
124	GO:0009416: response to light stimulus	3.93E-02
125	GO:0009058: biosynthetic process	4.38E-02
126	GO:0045893: positive regulation of transcription, DNA-templated	4.51E-02
127	GO:0006355: regulation of transcription, DNA-templated	4.86E-02

Rank	GO Term	Adjusted P value
1	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
2	GO:0046905: phytoene synthase activity	0.00E+00
3	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
4	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
7	GO:0009671: nitrate:proton symporter activity	1.02E-04
8	GO:0051996: squalene synthase activity	1.02E-04
9	GO:0046906: tetrapyrrole binding	1.02E-04
10	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	2.40E-04
11	GO:0000064: L-ornithine transmembrane transporter activity	2.40E-04
12	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	2.40E-04
13	GO:0005094: Rho GDP-dissociation inhibitor activity	2.40E-04
14	GO:0043425: bHLH transcription factor binding	2.40E-04
15	GO:0009977: proton motive force dependent protein transmembrane transporter activity	2.40E-04
16	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	2.40E-04
17	GO:0005528: FK506 binding	3.32E-04
18	GO:0002161: aminoacyl-tRNA editing activity	3.99E-04
19	GO:0047274: galactinol-sucrose galactosyltransferase activity	3.99E-04
20	GO:0090729: toxin activity	3.99E-04
21	GO:0005536: glucose binding	7.62E-04
22	GO:0005253: anion channel activity	7.62E-04
23	GO:0046556: alpha-L-arabinofuranosidase activity	7.62E-04
24	GO:0004396: hexokinase activity	7.62E-04
25	GO:0001053: plastid sigma factor activity	7.62E-04
26	GO:0019158: mannokinase activity	7.62E-04
27	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	7.62E-04
28	GO:0016987: sigma factor activity	7.62E-04
29	GO:0008725: DNA-3-methyladenine glycosylase activity	9.62E-04
30	GO:0005247: voltage-gated chloride channel activity	1.17E-03
31	GO:0004332: fructose-bisphosphate aldolase activity	1.17E-03
32	GO:0004559: alpha-mannosidase activity	1.40E-03
33	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	1.40E-03
34	GO:0019899: enzyme binding	1.65E-03
35	GO:0015112: nitrate transmembrane transporter activity	2.74E-03
36	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.77E-03
37	GO:0008047: enzyme activator activity	3.05E-03
38	GO:0003700: transcription factor activity, sequence-specific DNA binding	3.11E-03
39	GO:0000049: tRNA binding	3.69E-03
40	GO:0004565: beta-galactosidase activity	4.02E-03
41	GO:0008081: phosphoric diester hydrolase activity	4.02E-03
42	GO:0008266: poly(U) RNA binding	4.37E-03
43	GO:0015035: protein disulfide oxidoreductase activity	4.66E-03
44	GO:0008146: sulfotransferase activity	4.72E-03
45	GO:0004190: aspartic-type endopeptidase activity	4.72E-03
46	GO:0015079: potassium ion transmembrane transporter activity	5.85E-03
47	GO:0004176: ATP-dependent peptidase activity	6.24E-03
48	GO:0016779: nucleotidyltransferase activity	6.64E-03
49	GO:0022891: substrate-specific transmembrane transporter activity	7.06E-03
50	GO:0003727: single-stranded RNA binding	7.48E-03
51	GO:0047134: protein-disulfide reductase activity	7.91E-03
52	GO:0004812: aminoacyl-tRNA ligase activity	7.91E-03
53	GO:0050662: coenzyme binding	9.26E-03
54	GO:0004791: thioredoxin-disulfide reductase activity	9.26E-03
55	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.02E-02
56	GO:0003677: DNA binding	1.11E-02
57	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.12E-02
58	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.19E-02
59	GO:0016168: chlorophyll binding	1.38E-02
60	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.48E-02
61	GO:0008233: peptidase activity	1.48E-02
62	GO:0005096: GTPase activator activity	1.65E-02
63	GO:0030145: manganese ion binding	1.77E-02
64	GO:0004871: signal transducer activity	1.89E-02
65	GO:0004185: serine-type carboxypeptidase activity	2.26E-02
66	GO:0051537: 2 iron, 2 sulfur cluster binding	2.39E-02
67	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.80E-02
68	GO:0045330: aspartyl esterase activity	3.01E-02
69	GO:0003777: microtubule motor activity	3.01E-02
70	GO:0003729: mRNA binding	3.37E-02
71	GO:0030599: pectinesterase activity	3.44E-02
72	GO:0019843: rRNA binding	4.22E-02

Rank	GO Term	Adjusted P value
1	GO:0005943: phosphatidylinositol 3-kinase complex, class IA	0.00E+00
2	GO:0043235: receptor complex	0.00E+00
3	GO:0009534: chloroplast thylakoid	7.70E-06
4	GO:0009523: photosystem II	4.07E-05
5	GO:0009535: chloroplast thylakoid membrane	6.23E-05
6	GO:0009507: chloroplast	7.20E-05
7	GO:0031361: integral component of thylakoid membrane	1.02E-04
8	GO:0080085: signal recognition particle, chloroplast targeting	2.40E-04
9	GO:0033281: TAT protein transport complex	3.99E-04
10	GO:0009543: chloroplast thylakoid lumen	7.34E-04
11	GO:0030660: Golgi-associated vesicle membrane	7.62E-04
12	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	7.62E-04
13	GO:0009570: chloroplast stroma	1.08E-03
14	GO:0030529: intracellular ribonucleoprotein complex	1.14E-03
15	GO:0034707: chloride channel complex	1.17E-03
16	GO:0009533: chloroplast stromal thylakoid	1.65E-03
17	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.90E-03
18	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.17E-03
19	GO:0009579: thylakoid	2.21E-03
20	GO:0048046: apoplast	3.22E-03
21	GO:0005765: lysosomal membrane	3.36E-03
22	GO:0031307: integral component of mitochondrial outer membrane	3.69E-03
23	GO:0005578: proteinaceous extracellular matrix	4.02E-03
24	GO:0030095: chloroplast photosystem II	4.37E-03
25	GO:0010287: plastoglobule	5.36E-03
26	GO:0005623: cell	5.81E-03
27	GO:0009505: plant-type cell wall	6.91E-03
28	GO:0005871: kinesin complex	7.91E-03
29	GO:0005576: extracellular region	9.61E-03
30	GO:0005618: cell wall	1.25E-02
31	GO:0031969: chloroplast membrane	1.50E-02
32	GO:0009941: chloroplast envelope	1.67E-02
33	GO:0010008: endosome membrane	3.22E-02