co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G31040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090279: regulation of calcium ion import	0.00E+00
2	GO:1904526: regulation of microtubule binding	0.00E+00
3	GO:0071474: cellular hyperosmotic response	0.00E+00
4	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
5	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
6	GO:2000605: positive regulation of secondary growth	0.00E+00
7	GO:0051262: protein tetramerization	6.16E-05
8	GO:0000280: nuclear division	1.09E-04
9	GO:0042938: dipeptide transport	2.21E-04
10	GO:0010021: amylopectin biosynthetic process	2.21E-04
11	GO:0007094: mitotic spindle assembly checkpoint	2.84E-04
12	GO:0010304: PSII associated light-harvesting complex II catabolic process	3.51E-04
13	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.51E-04
14	GO:0045926: negative regulation of growth	4.20E-04
15	GO:0009787: regulation of abscisic acid-activated signaling pathway	5.68E-04
16	GO:0071482: cellular response to light stimulus	6.45E-04
17	GO:0015996: chlorophyll catabolic process	6.45E-04
18	GO:0009827: plant-type cell wall modification	6.45E-04
19	GO:0007346: regulation of mitotic cell cycle	8.07E-04
20	GO:0045036: protein targeting to chloroplast	8.92E-04
21	GO:1903507: negative regulation of nucleic acid-templated transcription	9.78E-04
22	GO:0046856: phosphatidylinositol dephosphorylation	9.78E-04
23	GO:0015706: nitrate transport	1.07E-03
24	GO:0008299: isoprenoid biosynthetic process	1.65E-03
25	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.87E-03
26	GO:0045489: pectin biosynthetic process	2.45E-03
27	GO:0019252: starch biosynthetic process	2.70E-03
28	GO:0009791: post-embryonic development	2.70E-03
29	GO:1901657: glycosyl compound metabolic process	3.08E-03
30	GO:0030163: protein catabolic process	3.08E-03
31	GO:0010027: thylakoid membrane organization	3.63E-03
32	GO:0009816: defense response to bacterium, incompatible interaction	3.76E-03
33	GO:0030244: cellulose biosynthetic process	4.34E-03
34	GO:0009834: plant-type secondary cell wall biogenesis	4.64E-03
35	GO:0051707: response to other organism	6.08E-03
36	GO:0031347: regulation of defense response	6.94E-03
37	GO:0006857: oligopeptide transport	7.84E-03
38	GO:0010228: vegetative to reproductive phase transition of meristem	1.45E-02
39	GO:0006470: protein dephosphorylation	1.54E-02
40	GO:0046686: response to cadmium ion	1.91E-02
41	GO:0006970: response to osmotic stress	2.02E-02
42	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.29E-02
43	GO:0044550: secondary metabolite biosynthetic process	2.37E-02
44	GO:0006629: lipid metabolic process	2.95E-02
45	GO:0009738: abscisic acid-activated signaling pathway	4.33E-02
46	GO:0009611: response to wounding	4.50E-02
47	GO:0051301: cell division	4.71E-02
48	GO:0045893: positive regulation of transcription, DNA-templated	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
2	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
3	GO:0034256: chlorophyll(ide) b reductase activity	2.41E-05
4	GO:0030941: chloroplast targeting sequence binding	2.41E-05
5	GO:0005227: calcium activated cation channel activity	2.41E-05
6	GO:0033201: alpha-1,4-glucan synthase activity	6.16E-05
7	GO:0070402: NADPH binding	1.09E-04
8	GO:0004373: glycogen (starch) synthase activity	1.09E-04
9	GO:0004445: inositol-polyphosphate 5-phosphatase activity	1.62E-04
10	GO:0009011: starch synthase activity	2.21E-04
11	GO:0042936: dipeptide transporter activity	2.21E-04
12	GO:0051861: glycolipid binding	2.21E-04
13	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	3.51E-04
14	GO:0005261: cation channel activity	4.20E-04
15	GO:0004033: aldo-keto reductase (NADP) activity	5.68E-04
16	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.07E-03
17	GO:0004190: aspartic-type endopeptidase activity	1.35E-03
18	GO:0003714: transcription corepressor activity	1.55E-03
19	GO:0008536: Ran GTPase binding	2.45E-03
20	GO:0016853: isomerase activity	2.57E-03
21	GO:0016413: O-acetyltransferase activity	3.49E-03
22	GO:0004721: phosphoprotein phosphatase activity	4.05E-03
23	GO:0102483: scopolin beta-glucosidase activity	4.05E-03
24	GO:0030145: manganese ion binding	4.80E-03
25	GO:0016787: hydrolase activity	4.90E-03
26	GO:0008422: beta-glucosidase activity	5.42E-03
27	GO:0003682: chromatin binding	1.99E-02
28	GO:0042803: protein homodimerization activity	2.62E-02
29	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.68E-02
30	GO:0004722: protein serine/threonine phosphatase activity	2.71E-02

Rank	GO Term	Adjusted P value
1	GO:0009570: chloroplast stroma	2.12E-04
2	GO:0005828: kinetochore microtubule	2.21E-04
3	GO:0000776: kinetochore	2.84E-04
4	GO:0000777: condensed chromosome kinetochore	4.20E-04
5	GO:0010369: chromocenter	4.20E-04
6	GO:0031359: integral component of chloroplast outer membrane	4.92E-04
7	GO:0009507: chloroplast	5.56E-04
8	GO:0009501: amyloplast	5.68E-04
9	GO:0005876: spindle microtubule	8.07E-04
10	GO:0009508: plastid chromosome	1.16E-03
11	GO:0009295: nucleoid	3.35E-03
12	GO:0009707: chloroplast outer membrane	4.34E-03
13	GO:0005635: nuclear envelope	7.84E-03
14	GO:0010287: plastoglobule	1.08E-02
15	GO:0005773: vacuole	1.55E-02
16	GO:0009535: chloroplast thylakoid membrane	2.74E-02
17	GO:0005576: extracellular region	3.92E-02
18	GO:0005618: cell wall	4.83E-02