co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30580

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0071327: cellular response to trehalose stimulus	0.00E+00
2	GO:0000169: activation of MAPK activity involved in osmosensory signaling pathway	0.00E+00
3	GO:1900367: positive regulation of defense response to insect	0.00E+00
4	GO:0006468: protein phosphorylation	1.45E-08
5	GO:0080142: regulation of salicylic acid biosynthetic process	9.35E-06
6	GO:0060548: negative regulation of cell death	9.35E-06
7	GO:0007166: cell surface receptor signaling pathway	1.31E-05
8	GO:0010942: positive regulation of cell death	2.35E-05
9	GO:1901183: positive regulation of camalexin biosynthetic process	1.02E-04
10	GO:0060862: negative regulation of floral organ abscission	1.02E-04
11	GO:0006805: xenobiotic metabolic process	1.02E-04
12	GO:0080136: priming of cellular response to stress	1.02E-04
13	GO:0009617: response to bacterium	1.81E-04
14	GO:0019483: beta-alanine biosynthetic process	2.40E-04
15	GO:1902000: homogentisate catabolic process	2.40E-04
16	GO:0019441: tryptophan catabolic process to kynurenine	2.40E-04
17	GO:0002221: pattern recognition receptor signaling pathway	2.40E-04
18	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	2.40E-04
19	GO:0009838: abscission	2.40E-04
20	GO:0080185: effector dependent induction by symbiont of host immune response	2.40E-04
21	GO:0010618: aerenchyma formation	2.40E-04
22	GO:0006212: uracil catabolic process	2.40E-04
23	GO:0042742: defense response to bacterium	2.40E-04
24	GO:0031349: positive regulation of defense response	2.40E-04
25	GO:1900140: regulation of seedling development	3.99E-04
26	GO:0010359: regulation of anion channel activity	3.99E-04
27	GO:0071492: cellular response to UV-A	3.99E-04
28	GO:0006517: protein deglycosylation	3.99E-04
29	GO:0009072: aromatic amino acid family metabolic process	3.99E-04
30	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.99E-04
31	GO:0055074: calcium ion homeostasis	3.99E-04
32	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.41E-04
33	GO:0031348: negative regulation of defense response	4.41E-04
34	GO:0009626: plant-type hypersensitive response	4.76E-04
35	GO:0006886: intracellular protein transport	5.44E-04
36	GO:0001676: long-chain fatty acid metabolic process	5.73E-04
37	GO:0048194: Golgi vesicle budding	5.73E-04
38	GO:0070301: cellular response to hydrogen peroxide	5.73E-04
39	GO:0009399: nitrogen fixation	5.73E-04
40	GO:0042631: cellular response to water deprivation	6.09E-04
41	GO:0010183: pollen tube guidance	7.51E-04
42	GO:2000038: regulation of stomatal complex development	7.62E-04
43	GO:0006542: glutamine biosynthetic process	7.62E-04
44	GO:0071486: cellular response to high light intensity	7.62E-04
45	GO:0009765: photosynthesis, light harvesting	7.62E-04
46	GO:0006891: intra-Golgi vesicle-mediated transport	8.02E-04
47	GO:0046283: anthocyanin-containing compound metabolic process	9.62E-04
48	GO:0031365: N-terminal protein amino acid modification	9.62E-04
49	GO:0010225: response to UV-C	9.62E-04
50	GO:0010150: leaf senescence	1.09E-03
51	GO:1900425: negative regulation of defense response to bacterium	1.17E-03
52	GO:0006751: glutathione catabolic process	1.17E-03
53	GO:0035435: phosphate ion transmembrane transport	1.17E-03
54	GO:1902456: regulation of stomatal opening	1.17E-03
55	GO:0009816: defense response to bacterium, incompatible interaction	1.20E-03
56	GO:0009627: systemic acquired resistance	1.26E-03
57	GO:0009612: response to mechanical stimulus	1.40E-03
58	GO:0006694: steroid biosynthetic process	1.40E-03
59	GO:0010555: response to mannitol	1.40E-03
60	GO:2000037: regulation of stomatal complex patterning	1.40E-03
61	GO:0010310: regulation of hydrogen peroxide metabolic process	1.40E-03
62	GO:2000067: regulation of root morphogenesis	1.40E-03
63	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.40E-03
64	GO:0000911: cytokinesis by cell plate formation	1.40E-03
65	GO:0070370: cellular heat acclimation	1.65E-03
66	GO:0010044: response to aluminum ion	1.65E-03
67	GO:0043090: amino acid import	1.65E-03
68	GO:0015031: protein transport	1.71E-03
69	GO:0030162: regulation of proteolysis	1.90E-03
70	GO:0006491: N-glycan processing	1.90E-03
71	GO:1900150: regulation of defense response to fungus	1.90E-03
72	GO:0006970: response to osmotic stress	2.07E-03
73	GO:0010120: camalexin biosynthetic process	2.17E-03
74	GO:0010204: defense response signaling pathway, resistance gene-independent	2.17E-03
75	GO:0043562: cellular response to nitrogen levels	2.17E-03
76	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.17E-03
77	GO:0007186: G-protein coupled receptor signaling pathway	2.17E-03
78	GO:0006631: fatty acid metabolic process	2.19E-03
79	GO:0006952: defense response	2.34E-03
80	GO:0051707: response to other organism	2.38E-03
81	GO:0046685: response to arsenic-containing substance	2.45E-03
82	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.58E-03
83	GO:1900426: positive regulation of defense response to bacterium	2.74E-03
84	GO:0048268: clathrin coat assembly	2.74E-03
85	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.74E-03
86	GO:0043069: negative regulation of programmed cell death	3.05E-03
87	GO:0009750: response to fructose	3.36E-03
88	GO:0030148: sphingolipid biosynthetic process	3.36E-03
89	GO:0010105: negative regulation of ethylene-activated signaling pathway	3.69E-03
90	GO:0012501: programmed cell death	3.69E-03
91	GO:0002213: defense response to insect	3.69E-03
92	GO:0010229: inflorescence development	4.02E-03
93	GO:0006807: nitrogen compound metabolic process	4.02E-03
94	GO:0034605: cellular response to heat	4.37E-03
95	GO:0006874: cellular calcium ion homeostasis	5.85E-03
96	GO:0009625: response to insect	7.06E-03
97	GO:0071215: cellular response to abscisic acid stimulus	7.06E-03
98	GO:0010091: trichome branching	7.48E-03
99	GO:0009306: protein secretion	7.48E-03
100	GO:0009738: abscisic acid-activated signaling pathway	8.03E-03
101	GO:0000413: protein peptidyl-prolyl isomerization	8.35E-03
102	GO:0046323: glucose import	8.80E-03
103	GO:0071472: cellular response to salt stress	8.80E-03
104	GO:0006470: protein dephosphorylation	8.93E-03
105	GO:0048544: recognition of pollen	9.26E-03
106	GO:0061025: membrane fusion	9.26E-03
107	GO:0010468: regulation of gene expression	9.32E-03
108	GO:0009749: response to glucose	9.73E-03
109	GO:0006623: protein targeting to vacuole	9.73E-03
110	GO:0010193: response to ozone	1.02E-02
111	GO:0006914: autophagy	1.17E-02
112	GO:0006904: vesicle docking involved in exocytosis	1.22E-02
113	GO:0000910: cytokinesis	1.27E-02
114	GO:0001666: response to hypoxia	1.32E-02
115	GO:0042128: nitrate assimilation	1.43E-02
116	GO:0048573: photoperiodism, flowering	1.48E-02
117	GO:0010200: response to chitin	1.55E-02
118	GO:0016192: vesicle-mediated transport	1.58E-02
119	GO:0008219: cell death	1.60E-02
120	GO:0009817: defense response to fungus, incompatible interaction	1.60E-02
121	GO:0048481: plant ovule development	1.60E-02
122	GO:0010311: lateral root formation	1.65E-02
123	GO:0006499: N-terminal protein myristoylation	1.71E-02
124	GO:0009407: toxin catabolic process	1.71E-02
125	GO:0010119: regulation of stomatal movement	1.77E-02
126	GO:0006865: amino acid transport	1.83E-02
127	GO:0006897: endocytosis	2.13E-02
128	GO:0016042: lipid catabolic process	2.16E-02
129	GO:0009751: response to salicylic acid	2.19E-02
130	GO:0006629: lipid metabolic process	2.22E-02
131	GO:0009744: response to sucrose	2.26E-02
132	GO:0009636: response to toxic substance	2.46E-02
133	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.59E-02
134	GO:0010224: response to UV-B	2.86E-02
135	GO:0009620: response to fungus	3.37E-02
136	GO:0018105: peptidyl-serine phosphorylation	3.67E-02
137	GO:0009742: brassinosteroid mediated signaling pathway	3.75E-02
138	GO:0009611: response to wounding	4.02E-02
139	GO:0006633: fatty acid biosynthetic process	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
2	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
3	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
4	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
5	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
6	GO:0003837: beta-ureidopropionase activity	0.00E+00
7	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
8	GO:0005524: ATP binding	8.25E-08
9	GO:0016301: kinase activity	3.06E-07
10	GO:0004713: protein tyrosine kinase activity	2.15E-06
11	GO:0004674: protein serine/threonine kinase activity	2.88E-05
12	GO:0102391: decanoate--CoA ligase activity	3.34E-05
13	GO:0004467: long-chain fatty acid-CoA ligase activity	4.52E-05
14	GO:0005515: protein binding	4.65E-05
15	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.89E-05
16	GO:0015168: glycerol transmembrane transporter activity	1.02E-04
17	GO:1901149: salicylic acid binding	1.02E-04
18	GO:0019786: Atg8-specific protease activity	1.02E-04
19	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	1.02E-04
20	GO:0008565: protein transporter activity	1.03E-04
21	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.18E-04
22	GO:0045140: inositol phosphoceramide synthase activity	2.40E-04
23	GO:0004061: arylformamidase activity	2.40E-04
24	GO:0004566: beta-glucuronidase activity	2.40E-04
25	GO:0019779: Atg8 activating enzyme activity	2.40E-04
26	GO:0003840: gamma-glutamyltransferase activity	3.99E-04
27	GO:0036374: glutathione hydrolase activity	3.99E-04
28	GO:0001664: G-protein coupled receptor binding	3.99E-04
29	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	3.99E-04
30	GO:0031683: G-protein beta/gamma-subunit complex binding	3.99E-04
31	GO:0033612: receptor serine/threonine kinase binding	4.03E-04
32	GO:0004672: protein kinase activity	5.37E-04
33	GO:0005354: galactose transmembrane transporter activity	5.73E-04
34	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.73E-04
35	GO:0030276: clathrin binding	6.55E-04
36	GO:0019776: Atg8 ligase activity	7.62E-04
37	GO:0004356: glutamate-ammonia ligase activity	9.62E-04
38	GO:0015145: monosaccharide transmembrane transporter activity	9.62E-04
39	GO:0047714: galactolipase activity	1.17E-03
40	GO:0004806: triglyceride lipase activity	1.33E-03
41	GO:0004012: phospholipid-translocating ATPase activity	1.40E-03
42	GO:0008235: metalloexopeptidase activity	1.65E-03
43	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	2.17E-03
44	GO:0005545: 1-phosphatidylinositol binding	3.05E-03
45	GO:0004177: aminopeptidase activity	3.36E-03
46	GO:0005315: inorganic phosphate transmembrane transporter activity	4.02E-03
47	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	4.02E-03
48	GO:0005509: calcium ion binding	4.35E-03
49	GO:0004970: ionotropic glutamate receptor activity	4.72E-03
50	GO:0004190: aspartic-type endopeptidase activity	4.72E-03
51	GO:0005217: intracellular ligand-gated ion channel activity	4.72E-03
52	GO:0003954: NADH dehydrogenase activity	5.46E-03
53	GO:0004707: MAP kinase activity	6.24E-03
54	GO:0005355: glucose transmembrane transporter activity	9.26E-03
55	GO:0016740: transferase activity	1.08E-02
56	GO:0008483: transaminase activity	1.22E-02
57	GO:0030246: carbohydrate binding	1.22E-02
58	GO:0016168: chlorophyll binding	1.38E-02
59	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.43E-02
60	GO:0004683: calmodulin-dependent protein kinase activity	1.48E-02
61	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.48E-02
62	GO:0030247: polysaccharide binding	1.48E-02
63	GO:0004722: protein serine/threonine phosphatase activity	1.98E-02
64	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.01E-02
65	GO:0004364: glutathione transferase activity	2.20E-02
66	GO:0005484: SNAP receptor activity	2.26E-02
67	GO:0015293: symporter activity	2.46E-02
68	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.52E-02
69	GO:0016298: lipase activity	2.86E-02
70	GO:0015171: amino acid transmembrane transporter activity	3.01E-02
71	GO:0031625: ubiquitin protein ligase binding	3.01E-02
72	GO:0016887: ATPase activity	3.44E-02
73	GO:0051082: unfolded protein binding	3.59E-02
74	GO:0015144: carbohydrate transmembrane transporter activity	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	5.20E-11
2	GO:0016021: integral component of membrane	6.59E-05
3	GO:0031304: intrinsic component of mitochondrial inner membrane	2.40E-04
4	GO:0005795: Golgi stack	2.67E-04
5	GO:0005775: vacuolar lumen	5.73E-04
6	GO:0019898: extrinsic component of membrane	7.51E-04
7	GO:0005776: autophagosome	7.62E-04
8	GO:0000164: protein phosphatase type 1 complex	9.62E-04
9	GO:0030131: clathrin adaptor complex	1.90E-03
10	GO:0000421: autophagosome membrane	1.90E-03
11	GO:0030665: clathrin-coated vesicle membrane	2.74E-03
12	GO:0017119: Golgi transport complex	3.05E-03
13	GO:0005765: lysosomal membrane	3.36E-03
14	GO:0005905: clathrin-coated pit	6.24E-03
15	GO:0031410: cytoplasmic vesicle	6.64E-03
16	GO:0030136: clathrin-coated vesicle	7.91E-03
17	GO:0009523: photosystem II	9.73E-03
18	GO:0009504: cell plate	9.73E-03
19	GO:0005777: peroxisome	9.99E-03
20	GO:0005788: endoplasmic reticulum lumen	1.38E-02
21	GO:0005802: trans-Golgi network	1.52E-02
22	GO:0019005: SCF ubiquitin ligase complex	1.60E-02
23	GO:0090406: pollen tube	2.26E-02
24	GO:0005856: cytoskeleton	2.46E-02
25	GO:0005834: heterotrimeric G-protein complex	3.30E-02
26	GO:0009524: phragmoplast	4.38E-02