co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G30550

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
2	GO:0001881: receptor recycling	0.00E+00
3	GO:0043462: regulation of ATPase activity	0.00E+00
4	GO:0009991: response to extracellular stimulus	0.00E+00
5	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
6	GO:0032780: negative regulation of ATPase activity	0.00E+00
7	GO:0006482: protein demethylation	0.00E+00
8	GO:0006542: glutamine biosynthetic process	2.94E-05
9	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	6.98E-05
10	GO:0000303: response to superoxide	2.00E-04
11	GO:0080173: male-female gamete recognition during double fertilization	2.00E-04
12	GO:0006481: C-terminal protein methylation	2.00E-04
13	GO:0009962: regulation of flavonoid biosynthetic process	2.00E-04
14	GO:0034214: protein hexamerization	2.00E-04
15	GO:0010265: SCF complex assembly	2.00E-04
16	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	2.00E-04
17	GO:0048455: stamen formation	2.00E-04
18	GO:0006805: xenobiotic metabolic process	2.00E-04
19	GO:0006464: cellular protein modification process	2.32E-04
20	GO:0019521: D-gluconate metabolic process	4.48E-04
21	GO:0019374: galactolipid metabolic process	4.48E-04
22	GO:0051788: response to misfolded protein	4.48E-04
23	GO:1902000: homogentisate catabolic process	4.48E-04
24	GO:0019441: tryptophan catabolic process to kynurenine	4.48E-04
25	GO:0097054: L-glutamate biosynthetic process	4.48E-04
26	GO:0031648: protein destabilization	4.48E-04
27	GO:0071395: cellular response to jasmonic acid stimulus	4.48E-04
28	GO:1905182: positive regulation of urease activity	4.48E-04
29	GO:0009867: jasmonic acid mediated signaling pathway	5.66E-04
30	GO:0007034: vacuolar transport	5.92E-04
31	GO:0009072: aromatic amino acid family metabolic process	7.29E-04
32	GO:0048586: regulation of long-day photoperiodism, flowering	7.29E-04
33	GO:0010498: proteasomal protein catabolic process	7.29E-04
34	GO:0008333: endosome to lysosome transport	7.29E-04
35	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	7.29E-04
36	GO:0034051: negative regulation of plant-type hypersensitive response	7.29E-04
37	GO:0006556: S-adenosylmethionine biosynthetic process	7.29E-04
38	GO:0010359: regulation of anion channel activity	7.29E-04
39	GO:0043617: cellular response to sucrose starvation	7.29E-04
40	GO:0006511: ubiquitin-dependent protein catabolic process	7.31E-04
41	GO:0009744: response to sucrose	7.78E-04
42	GO:0006468: protein phosphorylation	8.83E-04
43	GO:0006537: glutamate biosynthetic process	1.04E-03
44	GO:0006809: nitric oxide biosynthetic process	1.04E-03
45	GO:0009399: nitrogen fixation	1.04E-03
46	GO:0010255: glucose mediated signaling pathway	1.04E-03
47	GO:0001676: long-chain fatty acid metabolic process	1.04E-03
48	GO:0030433: ubiquitin-dependent ERAD pathway	1.07E-03
49	GO:0031348: negative regulation of defense response	1.07E-03
50	GO:0051603: proteolysis involved in cellular protein catabolic process	1.17E-03
51	GO:0010363: regulation of plant-type hypersensitive response	1.38E-03
52	GO:0042991: transcription factor import into nucleus	1.38E-03
53	GO:0019676: ammonia assimilation cycle	1.38E-03
54	GO:0018344: protein geranylgeranylation	1.76E-03
55	GO:0030308: negative regulation of cell growth	1.76E-03
56	GO:0010193: response to ozone	1.95E-03
57	GO:0009651: response to salt stress	2.09E-03
58	GO:0043248: proteasome assembly	2.17E-03
59	GO:0070814: hydrogen sulfide biosynthetic process	2.17E-03
60	GO:1902456: regulation of stomatal opening	2.17E-03
61	GO:0035435: phosphate ion transmembrane transport	2.17E-03
62	GO:0006751: glutathione catabolic process	2.17E-03
63	GO:0009094: L-phenylalanine biosynthetic process	2.60E-03
64	GO:0010555: response to mannitol	2.60E-03
65	GO:2000067: regulation of root morphogenesis	2.60E-03
66	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.96E-03
67	GO:0009816: defense response to bacterium, incompatible interaction	2.96E-03
68	GO:0071446: cellular response to salicylic acid stimulus	3.06E-03
69	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.06E-03
70	GO:0009610: response to symbiotic fungus	3.06E-03
71	GO:0006955: immune response	3.06E-03
72	GO:0048528: post-embryonic root development	3.06E-03
73	GO:0042128: nitrate assimilation	3.12E-03
74	GO:0006102: isocitrate metabolic process	3.55E-03
75	GO:0016559: peroxisome fission	3.55E-03
76	GO:0006644: phospholipid metabolic process	3.55E-03
77	GO:0046686: response to cadmium ion	3.85E-03
78	GO:0007186: G-protein coupled receptor signaling pathway	4.06E-03
79	GO:0030968: endoplasmic reticulum unfolded protein response	4.06E-03
80	GO:0010043: response to zinc ion	4.21E-03
81	GO:0009873: ethylene-activated signaling pathway	4.27E-03
82	GO:0007338: single fertilization	4.60E-03
83	GO:0046685: response to arsenic-containing substance	4.60E-03
84	GO:0006098: pentose-phosphate shunt	4.60E-03
85	GO:0051865: protein autoubiquitination	4.60E-03
86	GO:0048268: clathrin coat assembly	5.15E-03
87	GO:2000280: regulation of root development	5.15E-03
88	GO:0016571: histone methylation	5.15E-03
89	GO:0008202: steroid metabolic process	5.15E-03
90	GO:0006631: fatty acid metabolic process	5.48E-03
91	GO:0019538: protein metabolic process	5.74E-03
92	GO:0000103: sulfate assimilation	5.74E-03
93	GO:0043069: negative regulation of programmed cell death	5.74E-03
94	GO:0051707: response to other organism	5.94E-03
95	GO:0072593: reactive oxygen species metabolic process	6.34E-03
96	GO:0043085: positive regulation of catalytic activity	6.34E-03
97	GO:0015770: sucrose transport	6.34E-03
98	GO:0009750: response to fructose	6.34E-03
99	GO:0030148: sphingolipid biosynthetic process	6.34E-03
100	GO:0012501: programmed cell death	6.96E-03
101	GO:0000266: mitochondrial fission	6.96E-03
102	GO:0009723: response to ethylene	7.34E-03
103	GO:0048366: leaf development	7.50E-03
104	GO:0010102: lateral root morphogenesis	7.61E-03
105	GO:0006807: nitrogen compound metabolic process	7.61E-03
106	GO:0009887: animal organ morphogenesis	8.28E-03
107	GO:0042343: indole glucosinolate metabolic process	8.97E-03
108	GO:0010053: root epidermal cell differentiation	8.97E-03
109	GO:0034976: response to endoplasmic reticulum stress	9.68E-03
110	GO:0045892: negative regulation of transcription, DNA-templated	1.03E-02
111	GO:2000377: regulation of reactive oxygen species metabolic process	1.04E-02
112	GO:0006886: intracellular protein transport	1.05E-02
113	GO:0098542: defense response to other organism	1.19E-02
114	GO:0010017: red or far-red light signaling pathway	1.27E-02
115	GO:0035428: hexose transmembrane transport	1.27E-02
116	GO:0006730: one-carbon metabolic process	1.27E-02
117	GO:0007005: mitochondrion organization	1.27E-02
118	GO:0009408: response to heat	1.32E-02
119	GO:0009693: ethylene biosynthetic process	1.35E-02
120	GO:0006012: galactose metabolic process	1.35E-02
121	GO:0042147: retrograde transport, endosome to Golgi	1.52E-02
122	GO:0042631: cellular response to water deprivation	1.60E-02
123	GO:0010087: phloem or xylem histogenesis	1.60E-02
124	GO:0010118: stomatal movement	1.60E-02
125	GO:0009790: embryo development	1.67E-02
126	GO:0071472: cellular response to salt stress	1.69E-02
127	GO:0010154: fruit development	1.69E-02
128	GO:0010197: polar nucleus fusion	1.69E-02
129	GO:0046323: glucose import	1.69E-02
130	GO:0048544: recognition of pollen	1.78E-02
131	GO:0042752: regulation of circadian rhythm	1.78E-02
132	GO:0009646: response to absence of light	1.78E-02
133	GO:0006623: protein targeting to vacuole	1.87E-02
134	GO:0048825: cotyledon development	1.87E-02
135	GO:0009749: response to glucose	1.87E-02
136	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.97E-02
137	GO:0006891: intra-Golgi vesicle-mediated transport	1.97E-02
138	GO:0006979: response to oxidative stress	2.03E-02
139	GO:0010583: response to cyclopentenone	2.06E-02
140	GO:0016032: viral process	2.06E-02
141	GO:0030163: protein catabolic process	2.16E-02
142	GO:0055114: oxidation-reduction process	2.16E-02
143	GO:0071281: cellular response to iron ion	2.16E-02
144	GO:0006914: autophagy	2.25E-02
145	GO:0009567: double fertilization forming a zygote and endosperm	2.25E-02
146	GO:0009617: response to bacterium	2.37E-02
147	GO:0009911: positive regulation of flower development	2.55E-02
148	GO:0010029: regulation of seed germination	2.66E-02
149	GO:0009555: pollen development	2.71E-02
150	GO:0006974: cellular response to DNA damage stimulus	2.76E-02
151	GO:0006888: ER to Golgi vesicle-mediated transport	2.87E-02
152	GO:0048573: photoperiodism, flowering	2.87E-02
153	GO:0006950: response to stress	2.87E-02
154	GO:0035556: intracellular signal transduction	2.90E-02
155	GO:0009817: defense response to fungus, incompatible interaction	3.09E-02
156	GO:0048767: root hair elongation	3.20E-02
157	GO:0006970: response to osmotic stress	3.30E-02
158	GO:0009407: toxin catabolic process	3.31E-02
159	GO:0048527: lateral root development	3.42E-02
160	GO:0010119: regulation of stomatal movement	3.42E-02
161	GO:0007049: cell cycle	3.42E-02
162	GO:0007568: aging	3.42E-02
163	GO:0009910: negative regulation of flower development	3.42E-02
164	GO:0006099: tricarboxylic acid cycle	3.77E-02
165	GO:0010200: response to chitin	3.93E-02
166	GO:0046777: protein autophosphorylation	4.06E-02
167	GO:0006897: endocytosis	4.13E-02
168	GO:0006952: defense response	4.34E-02
169	GO:0009644: response to high light intensity	4.62E-02
170	GO:0008643: carbohydrate transport	4.62E-02
171	GO:0009636: response to toxic substance	4.75E-02
172	GO:0006855: drug transmembrane transport	4.88E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
3	GO:0015930: glutamate synthase activity	0.00E+00
4	GO:0051723: protein methylesterase activity	0.00E+00
5	GO:0042030: ATPase inhibitor activity	0.00E+00
6	GO:0016504: peptidase activator activity	0.00E+00
7	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
8	GO:0005524: ATP binding	1.08E-06
9	GO:0004713: protein tyrosine kinase activity	1.06E-05
10	GO:0005515: protein binding	3.94E-05
11	GO:0004356: glutamate-ammonia ligase activity	4.73E-05
12	GO:0031593: polyubiquitin binding	6.98E-05
13	GO:0036402: proteasome-activating ATPase activity	6.98E-05
14	GO:0102391: decanoate--CoA ligase activity	9.69E-05
15	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	9.69E-05
16	GO:0004467: long-chain fatty acid-CoA ligase activity	1.29E-04
17	GO:0016041: glutamate synthase (ferredoxin) activity	2.00E-04
18	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	2.00E-04
19	GO:0032934: sterol binding	4.48E-04
20	GO:0045140: inositol phosphoceramide synthase activity	4.48E-04
21	GO:0004061: arylformamidase activity	4.48E-04
22	GO:0015036: disulfide oxidoreductase activity	4.48E-04
23	GO:0004450: isocitrate dehydrogenase (NADP+) activity	4.48E-04
24	GO:0008517: folic acid transporter activity	4.48E-04
25	GO:0004566: beta-glucuronidase activity	4.48E-04
26	GO:0017025: TBP-class protein binding	6.61E-04
27	GO:0004674: protein serine/threonine kinase activity	6.66E-04
28	GO:0031683: G-protein beta/gamma-subunit complex binding	7.29E-04
29	GO:0003840: gamma-glutamyltransferase activity	7.29E-04
30	GO:0036374: glutathione hydrolase activity	7.29E-04
31	GO:0004663: Rab geranylgeranyltransferase activity	7.29E-04
32	GO:0004781: sulfate adenylyltransferase (ATP) activity	7.29E-04
33	GO:0016805: dipeptidase activity	7.29E-04
34	GO:0004478: methionine adenosyltransferase activity	7.29E-04
35	GO:0001664: G-protein coupled receptor binding	7.29E-04
36	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	7.29E-04
37	GO:0016151: nickel cation binding	7.29E-04
38	GO:0004298: threonine-type endopeptidase activity	9.79E-04
39	GO:0001653: peptide receptor activity	1.04E-03
40	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.04E-03
41	GO:0016887: ATPase activity	1.32E-03
42	GO:0070628: proteasome binding	1.38E-03
43	GO:0004301: epoxide hydrolase activity	1.38E-03
44	GO:0047769: arogenate dehydratase activity	1.38E-03
45	GO:0004664: prephenate dehydratase activity	1.38E-03
46	GO:0030276: clathrin binding	1.58E-03
47	GO:0015145: monosaccharide transmembrane transporter activity	1.76E-03
48	GO:0005496: steroid binding	1.76E-03
49	GO:0031386: protein tag	1.76E-03
50	GO:0051538: 3 iron, 4 sulfur cluster binding	1.76E-03
51	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.60E-03
52	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.60E-03
53	GO:0003978: UDP-glucose 4-epimerase activity	2.60E-03
54	GO:0003924: GTPase activity	2.89E-03
55	GO:0008506: sucrose:proton symporter activity	3.06E-03
56	GO:0008235: metalloexopeptidase activity	3.06E-03
57	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.06E-03
58	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.06E-03
59	GO:0004620: phospholipase activity	3.06E-03
60	GO:0004143: diacylglycerol kinase activity	3.06E-03
61	GO:0004672: protein kinase activity	3.43E-03
62	GO:0047893: flavonol 3-O-glucosyltransferase activity	3.55E-03
63	GO:0052747: sinapyl alcohol dehydrogenase activity	3.55E-03
64	GO:0004869: cysteine-type endopeptidase inhibitor activity	3.55E-03
65	GO:0016301: kinase activity	3.67E-03
66	GO:0003951: NAD+ kinase activity	4.06E-03
67	GO:0008142: oxysterol binding	4.06E-03
68	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.04E-03
69	GO:0045309: protein phosphorylated amino acid binding	5.15E-03
70	GO:0047617: acyl-CoA hydrolase activity	5.15E-03
71	GO:0005545: 1-phosphatidylinositol binding	5.74E-03
72	GO:0019904: protein domain specific binding	6.34E-03
73	GO:0008794: arsenate reductase (glutaredoxin) activity	6.34E-03
74	GO:0004177: aminopeptidase activity	6.34E-03
75	GO:0008559: xenobiotic-transporting ATPase activity	6.34E-03
76	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.96E-03
77	GO:0005315: inorganic phosphate transmembrane transporter activity	7.61E-03
78	GO:0031072: heat shock protein binding	7.61E-03
79	GO:0004725: protein tyrosine phosphatase activity	9.68E-03
80	GO:0003954: NADH dehydrogenase activity	1.04E-02
81	GO:0004871: signal transducer activity	1.07E-02
82	GO:0030246: carbohydrate binding	1.09E-02
83	GO:0043424: protein histidine kinase binding	1.12E-02
84	GO:0035251: UDP-glucosyltransferase activity	1.19E-02
85	GO:0022891: substrate-specific transmembrane transporter activity	1.35E-02
86	GO:0008565: protein transporter activity	1.72E-02
87	GO:0005355: glucose transmembrane transporter activity	1.78E-02
88	GO:0004197: cysteine-type endopeptidase activity	2.06E-02
89	GO:0008194: UDP-glycosyltransferase activity	2.22E-02
90	GO:0016597: amino acid binding	2.45E-02
91	GO:0000166: nucleotide binding	2.71E-02
92	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.76E-02
93	GO:0004683: calmodulin-dependent protein kinase activity	2.87E-02
94	GO:0016491: oxidoreductase activity	3.01E-02
95	GO:0004222: metalloendopeptidase activity	3.31E-02
96	GO:0030145: manganese ion binding	3.42E-02
97	GO:0008233: peptidase activity	3.73E-02
98	GO:0004364: glutathione transferase activity	4.25E-02
99	GO:0042803: protein homodimerization activity	4.75E-02
100	GO:0004722: protein serine/threonine phosphatase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005886: plasma membrane	1.56E-07
3	GO:0005829: cytosol	5.23E-07
4	GO:0008540: proteasome regulatory particle, base subcomplex	8.00E-06
5	GO:0000502: proteasome complex	9.94E-06
6	GO:0005839: proteasome core complex	6.16E-05
7	GO:0031597: cytosolic proteasome complex	9.69E-05
8	GO:0005777: peroxisome	1.06E-04
9	GO:0031595: nuclear proteasome complex	1.29E-04
10	GO:0005794: Golgi apparatus	3.38E-04
11	GO:0031304: intrinsic component of mitochondrial inner membrane	4.48E-04
12	GO:0031314: extrinsic component of mitochondrial inner membrane	4.48E-04
13	GO:0030139: endocytic vesicle	7.29E-04
14	GO:0031461: cullin-RING ubiquitin ligase complex	1.04E-03
15	GO:0005968: Rab-protein geranylgeranyltransferase complex	1.04E-03
16	GO:0005776: autophagosome	1.38E-03
17	GO:0030904: retromer complex	2.17E-03
18	GO:0005771: multivesicular body	2.17E-03
19	GO:0030127: COPII vesicle coat	2.17E-03
20	GO:0016363: nuclear matrix	2.60E-03
21	GO:0000794: condensed nuclear chromosome	3.06E-03
22	GO:0030131: clathrin adaptor complex	3.55E-03
23	GO:0005783: endoplasmic reticulum	4.59E-03
24	GO:0005819: spindle	5.04E-03
25	GO:0030665: clathrin-coated vesicle membrane	5.15E-03
26	GO:0031902: late endosome membrane	5.48E-03
27	GO:0005773: vacuole	6.17E-03
28	GO:0005765: lysosomal membrane	6.34E-03
29	GO:0005737: cytoplasm	6.70E-03
30	GO:0016602: CCAAT-binding factor complex	7.61E-03
31	GO:0005764: lysosome	8.28E-03
32	GO:0005635: nuclear envelope	8.58E-03
33	GO:0005795: Golgi stack	8.97E-03
34	GO:0005834: heterotrimeric G-protein complex	1.01E-02
35	GO:0005741: mitochondrial outer membrane	1.19E-02
36	GO:0005905: clathrin-coated pit	1.19E-02
37	GO:0031410: cytoplasmic vesicle	1.27E-02
38	GO:0009524: phragmoplast	1.51E-02
39	GO:0030136: clathrin-coated vesicle	1.52E-02
40	GO:0005774: vacuolar membrane	1.82E-02
41	GO:0071944: cell periphery	2.16E-02
42	GO:0005618: cell wall	2.34E-02
43	GO:0005778: peroxisomal membrane	2.35E-02
44	GO:0009570: chloroplast stroma	2.50E-02
45	GO:0000151: ubiquitin ligase complex	3.09E-02
46	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	3.36E-02
47	GO:0000325: plant-type vacuole	3.42E-02