co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G29720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042430: indole-containing compound metabolic process	0.00E+00
2	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
3	GO:0006468: protein phosphorylation	8.70E-08
4	GO:0006952: defense response	6.27E-06
5	GO:0060548: negative regulation of cell death	8.78E-06
6	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	4.27E-05
7	GO:0051245: negative regulation of cellular defense response	9.88E-05
8	GO:0009968: negative regulation of signal transduction	9.88E-05
9	GO:0043547: positive regulation of GTPase activity	9.88E-05
10	GO:0071365: cellular response to auxin stimulus	1.72E-04
11	GO:0006212: uracil catabolic process	2.32E-04
12	GO:0019483: beta-alanine biosynthetic process	2.32E-04
13	GO:0046740: transport of virus in host, cell to cell	2.32E-04
14	GO:0015914: phospholipid transport	2.32E-04
15	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.32E-04
16	GO:0009838: abscission	2.32E-04
17	GO:0080185: effector dependent induction by symbiont of host immune response	2.32E-04
18	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	3.86E-04
19	GO:0055074: calcium ion homeostasis	3.86E-04
20	GO:1900140: regulation of seedling development	3.86E-04
21	GO:0071492: cellular response to UV-A	3.86E-04
22	GO:0072661: protein targeting to plasma membrane	3.86E-04
23	GO:0031348: negative regulation of defense response	4.20E-04
24	GO:0010148: transpiration	5.54E-04
25	GO:0002679: respiratory burst involved in defense response	5.54E-04
26	GO:0006612: protein targeting to membrane	5.54E-04
27	GO:0048194: Golgi vesicle budding	5.54E-04
28	GO:0010071: root meristem specification	5.54E-04
29	GO:0070301: cellular response to hydrogen peroxide	5.54E-04
30	GO:0061025: membrane fusion	6.69E-04
31	GO:0009749: response to glucose	7.16E-04
32	GO:0010363: regulation of plant-type hypersensitive response	7.37E-04
33	GO:0071486: cellular response to high light intensity	7.37E-04
34	GO:0009765: photosynthesis, light harvesting	7.37E-04
35	GO:0046283: anthocyanin-containing compound metabolic process	9.32E-04
36	GO:0042742: defense response to bacterium	1.03E-03
37	GO:0009117: nucleotide metabolic process	1.14E-03
38	GO:0009816: defense response to bacterium, incompatible interaction	1.15E-03
39	GO:0007166: cell surface receptor signaling pathway	1.21E-03
40	GO:0000911: cytokinesis by cell plate formation	1.36E-03
41	GO:0009094: L-phenylalanine biosynthetic process	1.36E-03
42	GO:0009612: response to mechanical stimulus	1.36E-03
43	GO:0010555: response to mannitol	1.36E-03
44	GO:2000067: regulation of root morphogenesis	1.36E-03
45	GO:0030162: regulation of proteolysis	1.84E-03
46	GO:0010078: maintenance of root meristem identity	1.84E-03
47	GO:0010492: maintenance of shoot apical meristem identity	1.84E-03
48	GO:0006887: exocytosis	2.09E-03
49	GO:0007186: G-protein coupled receptor signaling pathway	2.10E-03
50	GO:0006367: transcription initiation from RNA polymerase II promoter	2.10E-03
51	GO:0010204: defense response signaling pathway, resistance gene-independent	2.10E-03
52	GO:0043562: cellular response to nitrogen levels	2.10E-03
53	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	2.10E-03
54	GO:0051865: protein autoubiquitination	2.37E-03
55	GO:0007338: single fertilization	2.37E-03
56	GO:0046685: response to arsenic-containing substance	2.37E-03
57	GO:0010200: response to chitin	2.42E-03
58	GO:0016192: vesicle-mediated transport	2.47E-03
59	GO:0046777: protein autophosphorylation	2.53E-03
60	GO:0048268: clathrin coat assembly	2.65E-03
61	GO:0008202: steroid metabolic process	2.65E-03
62	GO:0006896: Golgi to vacuole transport	2.95E-03
63	GO:0043069: negative regulation of programmed cell death	2.95E-03
64	GO:0006886: intracellular protein transport	3.03E-03
65	GO:0009750: response to fructose	3.25E-03
66	GO:0048229: gametophyte development	3.25E-03
67	GO:0030148: sphingolipid biosynthetic process	3.25E-03
68	GO:0012501: programmed cell death	3.57E-03
69	GO:0015706: nitrate transport	3.57E-03
70	GO:0000266: mitochondrial fission	3.57E-03
71	GO:0009737: response to abscisic acid	3.88E-03
72	GO:0006807: nitrogen compound metabolic process	3.89E-03
73	GO:0009620: response to fungus	3.94E-03
74	GO:0007034: vacuolar transport	4.22E-03
75	GO:0042343: indole glucosinolate metabolic process	4.57E-03
76	GO:0010167: response to nitrate	4.57E-03
77	GO:0070588: calcium ion transmembrane transport	4.57E-03
78	GO:0010053: root epidermal cell differentiation	4.57E-03
79	GO:0009863: salicylic acid mediated signaling pathway	5.28E-03
80	GO:0006874: cellular calcium ion homeostasis	5.65E-03
81	GO:0048278: vesicle docking	6.03E-03
82	GO:0098542: defense response to other organism	6.03E-03
83	GO:0010017: red or far-red light signaling pathway	6.42E-03
84	GO:0009814: defense response, incompatible interaction	6.42E-03
85	GO:2000022: regulation of jasmonic acid mediated signaling pathway	6.42E-03
86	GO:0019722: calcium-mediated signaling	7.23E-03
87	GO:0042127: regulation of cell proliferation	7.23E-03
88	GO:0080022: primary root development	8.07E-03
89	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	8.31E-03
90	GO:0008360: regulation of cell shape	8.50E-03
91	GO:0010182: sugar mediated signaling pathway	8.50E-03
92	GO:0046323: glucose import	8.50E-03
93	GO:0010468: regulation of gene expression	8.86E-03
94	GO:0006623: protein targeting to vacuole	9.39E-03
95	GO:0010183: pollen tube guidance	9.39E-03
96	GO:0006891: intra-Golgi vesicle-mediated transport	9.85E-03
97	GO:0009567: double fertilization forming a zygote and endosperm	1.13E-02
98	GO:0006904: vesicle docking involved in exocytosis	1.18E-02
99	GO:0006906: vesicle fusion	1.38E-02
100	GO:0009627: systemic acquired resistance	1.38E-02
101	GO:0042128: nitrate assimilation	1.38E-02
102	GO:0009817: defense response to fungus, incompatible interaction	1.54E-02
103	GO:0008219: cell death	1.54E-02
104	GO:0044550: secondary metabolite biosynthetic process	1.55E-02
105	GO:0010311: lateral root formation	1.60E-02
106	GO:0006499: N-terminal protein myristoylation	1.65E-02
107	GO:0010119: regulation of stomatal movement	1.71E-02
108	GO:0010043: response to zinc ion	1.71E-02
109	GO:0016310: phosphorylation	1.77E-02
110	GO:0009867: jasmonic acid mediated signaling pathway	1.82E-02
111	GO:0045087: innate immune response	1.82E-02
112	GO:0006897: endocytosis	2.06E-02
113	GO:0009744: response to sucrose	2.18E-02
114	GO:0051707: response to other organism	2.18E-02
115	GO:0050832: defense response to fungus	2.35E-02
116	GO:0031347: regulation of defense response	2.50E-02
117	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.50E-02
118	GO:0015031: protein transport	2.60E-02
119	GO:0009626: plant-type hypersensitive response	3.18E-02
120	GO:0018105: peptidyl-serine phosphorylation	3.54E-02
121	GO:0009742: brassinosteroid mediated signaling pathway	3.62E-02
122	GO:0009738: abscisic acid-activated signaling pathway	3.63E-02
123	GO:0009611: response to wounding	3.83E-02
124	GO:0035556: intracellular signal transduction	3.95E-02
125	GO:0009845: seed germination	4.30E-02
126	GO:0007275: multicellular organism development	4.46E-02
127	GO:0007165: signal transduction	4.78E-02
128	GO:0006413: translational initiation	4.86E-02
129	GO:0040008: regulation of growth	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0003837: beta-ureidopropionase activity	0.00E+00
2	GO:0052861: glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group	0.00E+00
3	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
4	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
5	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
6	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
7	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
8	GO:0005524: ATP binding	1.10E-06
9	GO:0004674: protein serine/threonine kinase activity	3.65E-06
10	GO:0004143: diacylglycerol kinase activity	4.27E-05
11	GO:0003951: NAD+ kinase activity	7.06E-05
12	GO:0004672: protein kinase activity	9.50E-05
13	GO:0015168: glycerol transmembrane transporter activity	9.88E-05
14	GO:1901149: salicylic acid binding	9.88E-05
15	GO:0004713: protein tyrosine kinase activity	1.26E-04
16	GO:0032934: sterol binding	2.32E-04
17	GO:0045140: inositol phosphoceramide synthase activity	2.32E-04
18	GO:0004385: guanylate kinase activity	2.32E-04
19	GO:0033612: receptor serine/threonine kinase binding	3.84E-04
20	GO:0031683: G-protein beta/gamma-subunit complex binding	3.86E-04
21	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	3.86E-04
22	GO:0001664: G-protein coupled receptor binding	3.86E-04
23	GO:0016301: kinase activity	4.32E-04
24	GO:0005354: galactose transmembrane transporter activity	5.54E-04
25	GO:0043495: protein anchor	7.37E-04
26	GO:0004930: G-protein coupled receptor activity	7.37E-04
27	GO:0047769: arogenate dehydratase activity	7.37E-04
28	GO:0004664: prephenate dehydratase activity	7.37E-04
29	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.37E-04
30	GO:0015145: monosaccharide transmembrane transporter activity	9.32E-04
31	GO:0004012: phospholipid-translocating ATPase activity	1.36E-03
32	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.84E-03
33	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.93E-03
34	GO:0008142: oxysterol binding	2.10E-03
35	GO:0003843: 1,3-beta-D-glucan synthase activity	2.10E-03
36	GO:0005484: SNAP receptor activity	2.27E-03
37	GO:0015112: nitrate transmembrane transporter activity	2.65E-03
38	GO:0005515: protein binding	2.85E-03
39	GO:0005545: 1-phosphatidylinositol binding	2.95E-03
40	GO:0005388: calcium-transporting ATPase activity	3.89E-03
41	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.89E-03
42	GO:0005262: calcium channel activity	3.89E-03
43	GO:0005217: intracellular ligand-gated ion channel activity	4.57E-03
44	GO:0004970: ionotropic glutamate receptor activity	4.57E-03
45	GO:0004190: aspartic-type endopeptidase activity	4.57E-03
46	GO:0003954: NADH dehydrogenase activity	5.28E-03
47	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.92E-03
48	GO:0030276: clathrin binding	8.50E-03
49	GO:0008536: Ran GTPase binding	8.50E-03
50	GO:0010181: FMN binding	8.94E-03
51	GO:0005355: glucose transmembrane transporter activity	8.94E-03
52	GO:0030246: carbohydrate binding	1.15E-02
53	GO:0016597: amino acid binding	1.23E-02
54	GO:0051213: dioxygenase activity	1.28E-02
55	GO:0016168: chlorophyll binding	1.33E-02
56	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.38E-02
57	GO:0004683: calmodulin-dependent protein kinase activity	1.43E-02
58	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.43E-02
59	GO:0005096: GTPase activator activity	1.60E-02
60	GO:0005509: calcium ion binding	1.74E-02
61	GO:0004871: signal transducer activity	1.80E-02
62	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.82E-02
63	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.85E-02
64	GO:0000149: SNARE binding	1.94E-02
65	GO:0003924: GTPase activity	2.11E-02
66	GO:0031625: ubiquitin protein ligase binding	2.90E-02
67	GO:0020037: heme binding	3.40E-02
68	GO:0051082: unfolded protein binding	3.47E-02
69	GO:0015144: carbohydrate transmembrane transporter activity	4.62E-02
70	GO:0008565: protein transporter activity	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0005674: transcription factor TFIIF complex	0.00E+00
2	GO:0005886: plasma membrane	2.21E-11
3	GO:0016021: integral component of membrane	5.06E-06
4	GO:0009504: cell plate	3.77E-05
5	GO:0031304: intrinsic component of mitochondrial inner membrane	2.32E-04
6	GO:0030136: clathrin-coated vesicle	5.38E-04
7	GO:0070062: extracellular exosome	5.54E-04
8	GO:0019005: SCF ubiquitin ligase complex	1.40E-03
9	GO:0000148: 1,3-beta-D-glucan synthase complex	2.10E-03
10	GO:0017119: Golgi transport complex	2.95E-03
11	GO:0005802: trans-Golgi network	3.19E-03
12	GO:0005783: endoplasmic reticulum	3.46E-03
13	GO:0005794: Golgi apparatus	3.93E-03
14	GO:0005795: Golgi stack	4.57E-03
15	GO:0005905: clathrin-coated pit	6.03E-03
16	GO:0009523: photosystem II	9.39E-03
17	GO:0019898: extrinsic component of membrane	9.39E-03
18	GO:0000145: exocyst	1.03E-02
19	GO:0005788: endoplasmic reticulum lumen	1.33E-02
20	GO:0009506: plasmodesma	1.36E-02
21	GO:0031902: late endosome membrane	2.06E-02
22	GO:0031201: SNARE complex	2.06E-02
23	GO:0090406: pollen tube	2.18E-02
24	GO:0016020: membrane	2.68E-02
25	GO:0000139: Golgi membrane	2.81E-02
26	GO:0005887: integral component of plasma membrane	2.87E-02
27	GO:0010008: endosome membrane	3.11E-02
28	GO:0005834: heterotrimeric G-protein complex	3.18E-02
29	GO:0005789: endoplasmic reticulum membrane	3.27E-02
30	GO:0009706: chloroplast inner membrane	3.47E-02
31	GO:0009524: phragmoplast	4.22E-02
32	GO:0005777: peroxisome	4.29E-02