co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G28840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043066: negative regulation of apoptotic process	1.33E-05
2	GO:0006950: response to stress	2.37E-05
3	GO:0010104: regulation of ethylene-activated signaling pathway	3.83E-05
4	GO:0051123: RNA polymerase II transcriptional preinitiation complex assembly	5.40E-05
5	GO:0043966: histone H3 acetylation	1.11E-04
6	GO:0010048: vernalization response	2.53E-04
7	GO:0010072: primary shoot apical meristem specification	2.79E-04
8	GO:0006352: DNA-templated transcription, initiation	2.79E-04
9	GO:2000028: regulation of photoperiodism, flowering	3.33E-04
10	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.66E-04
11	GO:0051260: protein homooligomerization	5.09E-04
12	GO:0071215: cellular response to abscisic acid stimulus	5.71E-04
13	GO:0016567: protein ubiquitination	6.27E-04
14	GO:0042631: cellular response to water deprivation	6.67E-04
15	GO:0048573: photoperiodism, flowering	1.13E-03
16	GO:0009867: jasmonic acid mediated signaling pathway	1.40E-03
17	GO:0045087: innate immune response	1.40E-03
18	GO:0031347: regulation of defense response	1.88E-03
19	GO:0006468: protein phosphorylation	1.99E-03
20	GO:0009736: cytokinin-activated signaling pathway	2.02E-03
21	GO:0006813: potassium ion transport	2.02E-03
22	GO:0009909: regulation of flower development	2.17E-03
23	GO:0006417: regulation of translation	2.17E-03
24	GO:0006413: translational initiation	3.53E-03
25	GO:0007166: cell surface receptor signaling pathway	4.06E-03
26	GO:0044550: secondary metabolite biosynthetic process	6.13E-03
27	GO:0006355: regulation of transcription, DNA-templated	1.03E-02
28	GO:0009611: response to wounding	1.15E-02
29	GO:0042742: defense response to bacterium	1.87E-02
30	GO:0006351: transcription, DNA-templated	2.46E-02
31	GO:0007165: signal transduction	3.16E-02

Rank	GO Term	Adjusted P value
1	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	9.84E-08
2	GO:0001102: RNA polymerase II activating transcription factor binding	4.83E-06
3	GO:0004383: guanylate cyclase activity	2.46E-05
4	GO:0001653: peptide receptor activity	3.83E-05
5	GO:0017025: TBP-class protein binding	3.90E-04
6	GO:0005249: voltage-gated potassium channel activity	6.67E-04
7	GO:0004402: histone acetyltransferase activity	6.67E-04
8	GO:0004674: protein serine/threonine kinase activity	1.13E-03
9	GO:0030247: polysaccharide binding	1.13E-03
10	GO:0005096: GTPase activator activity	1.24E-03
11	GO:0005524: ATP binding	2.31E-03
12	GO:0004842: ubiquitin-protein transferase activity	2.41E-03
13	GO:0003743: translation initiation factor activity	4.12E-03
14	GO:0046982: protein heterodimerization activity	4.92E-03
15	GO:0016301: kinase activity	5.31E-03
16	GO:0043531: ADP binding	5.32E-03
17	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	6.91E-03
18	GO:0019825: oxygen binding	1.46E-02
19	GO:0005516: calmodulin binding	1.51E-02
20	GO:0005515: protein binding	1.58E-02
21	GO:0005506: iron ion binding	1.85E-02
22	GO:0004672: protein kinase activity	2.46E-02
23	GO:0003729: mRNA binding	2.48E-02
24	GO:0020037: heme binding	2.59E-02
25	GO:0003677: DNA binding	2.89E-02
26	GO:0016787: hydrolase activity	3.22E-02

Rank	GO Term	Adjusted P value
1	GO:0000124: SAGA complex	1.33E-05
2	GO:0008076: voltage-gated potassium channel complex	3.83E-05
3	GO:0005669: transcription factor TFIID complex	1.54E-04
4	GO:0005654: nucleoplasm	2.93E-03
5	GO:0005634: nucleus	1.19E-02