GO Enrichment Analysis of Co-expressed Genes with
AT2G27060
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008064: regulation of actin polymerization or depolymerization | 0.00E+00 |
| 2 | GO:0051493: regulation of cytoskeleton organization | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 5 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 6 | GO:0032544: plastid translation | 1.48E-07 |
| 7 | GO:0010027: thylakoid membrane organization | 3.03E-06 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 4.67E-06 |
| 9 | GO:0042254: ribosome biogenesis | 1.44E-05 |
| 10 | GO:0006412: translation | 2.14E-05 |
| 11 | GO:0006546: glycine catabolic process | 6.01E-05 |
| 12 | GO:0010207: photosystem II assembly | 6.83E-05 |
| 13 | GO:0016123: xanthophyll biosynthetic process | 9.49E-05 |
| 14 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.37E-04 |
| 15 | GO:0042372: phylloquinone biosynthetic process | 1.88E-04 |
| 16 | GO:0042371: vitamin K biosynthetic process | 3.04E-04 |
| 17 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.04E-04 |
| 18 | GO:0060627: regulation of vesicle-mediated transport | 3.04E-04 |
| 19 | GO:0010442: guard cell morphogenesis | 3.04E-04 |
| 20 | GO:0006783: heme biosynthetic process | 4.57E-04 |
| 21 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.31E-04 |
| 22 | GO:0052541: plant-type cell wall cellulose metabolic process | 6.66E-04 |
| 23 | GO:0010115: regulation of abscisic acid biosynthetic process | 6.66E-04 |
| 24 | GO:0045717: negative regulation of fatty acid biosynthetic process | 6.66E-04 |
| 25 | GO:0009773: photosynthetic electron transport in photosystem I | 7.28E-04 |
| 26 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.31E-04 |
| 27 | GO:0090391: granum assembly | 1.08E-03 |
| 28 | GO:0006633: fatty acid biosynthetic process | 1.30E-03 |
| 29 | GO:0051639: actin filament network formation | 1.55E-03 |
| 30 | GO:0034059: response to anoxia | 1.55E-03 |
| 31 | GO:0016556: mRNA modification | 1.55E-03 |
| 32 | GO:0006424: glutamyl-tRNA aminoacylation | 1.55E-03 |
| 33 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 2.07E-03 |
| 34 | GO:0010037: response to carbon dioxide | 2.07E-03 |
| 35 | GO:0015976: carbon utilization | 2.07E-03 |
| 36 | GO:0051764: actin crosslink formation | 2.07E-03 |
| 37 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.07E-03 |
| 38 | GO:0009765: photosynthesis, light harvesting | 2.07E-03 |
| 39 | GO:2000122: negative regulation of stomatal complex development | 2.07E-03 |
| 40 | GO:0009306: protein secretion | 2.28E-03 |
| 41 | GO:0016117: carotenoid biosynthetic process | 2.47E-03 |
| 42 | GO:0010236: plastoquinone biosynthetic process | 2.65E-03 |
| 43 | GO:0009247: glycolipid biosynthetic process | 2.65E-03 |
| 44 | GO:0016120: carotene biosynthetic process | 2.65E-03 |
| 45 | GO:0032543: mitochondrial translation | 2.65E-03 |
| 46 | GO:0006561: proline biosynthetic process | 3.27E-03 |
| 47 | GO:0010405: arabinogalactan protein metabolic process | 3.27E-03 |
| 48 | GO:0032973: amino acid export | 3.27E-03 |
| 49 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.27E-03 |
| 50 | GO:0010190: cytochrome b6f complex assembly | 3.27E-03 |
| 51 | GO:0032502: developmental process | 3.79E-03 |
| 52 | GO:0007264: small GTPase mediated signal transduction | 3.79E-03 |
| 53 | GO:0009955: adaxial/abaxial pattern specification | 3.93E-03 |
| 54 | GO:1901259: chloroplast rRNA processing | 3.93E-03 |
| 55 | GO:0006400: tRNA modification | 4.64E-03 |
| 56 | GO:0009395: phospholipid catabolic process | 4.64E-03 |
| 57 | GO:0009772: photosynthetic electron transport in photosystem II | 4.64E-03 |
| 58 | GO:0043090: amino acid import | 4.64E-03 |
| 59 | GO:1900056: negative regulation of leaf senescence | 4.64E-03 |
| 60 | GO:0010196: nonphotochemical quenching | 4.64E-03 |
| 61 | GO:0010444: guard mother cell differentiation | 4.64E-03 |
| 62 | GO:0015979: photosynthesis | 4.96E-03 |
| 63 | GO:0010928: regulation of auxin mediated signaling pathway | 5.39E-03 |
| 64 | GO:0042255: ribosome assembly | 5.39E-03 |
| 65 | GO:0006353: DNA-templated transcription, termination | 5.39E-03 |
| 66 | GO:0009690: cytokinin metabolic process | 5.39E-03 |
| 67 | GO:0006605: protein targeting | 5.39E-03 |
| 68 | GO:0019375: galactolipid biosynthetic process | 5.39E-03 |
| 69 | GO:0009627: systemic acquired resistance | 5.72E-03 |
| 70 | GO:0010411: xyloglucan metabolic process | 6.04E-03 |
| 71 | GO:0017004: cytochrome complex assembly | 6.18E-03 |
| 72 | GO:0009932: cell tip growth | 6.18E-03 |
| 73 | GO:0009051: pentose-phosphate shunt, oxidative branch | 7.01E-03 |
| 74 | GO:0010206: photosystem II repair | 7.01E-03 |
| 75 | GO:0080144: amino acid homeostasis | 7.01E-03 |
| 76 | GO:0010205: photoinhibition | 7.87E-03 |
| 77 | GO:0009638: phototropism | 7.87E-03 |
| 78 | GO:0006779: porphyrin-containing compound biosynthetic process | 7.87E-03 |
| 79 | GO:0009688: abscisic acid biosynthetic process | 8.77E-03 |
| 80 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 8.77E-03 |
| 81 | GO:0009750: response to fructose | 9.71E-03 |
| 82 | GO:0018119: peptidyl-cysteine S-nitrosylation | 9.71E-03 |
| 83 | GO:0006415: translational termination | 9.71E-03 |
| 84 | GO:0009073: aromatic amino acid family biosynthetic process | 9.71E-03 |
| 85 | GO:0042546: cell wall biogenesis | 1.14E-02 |
| 86 | GO:0006006: glucose metabolic process | 1.17E-02 |
| 87 | GO:0050826: response to freezing | 1.17E-02 |
| 88 | GO:0009725: response to hormone | 1.17E-02 |
| 89 | GO:0010628: positive regulation of gene expression | 1.17E-02 |
| 90 | GO:0046686: response to cadmium ion | 1.28E-02 |
| 91 | GO:0009658: chloroplast organization | 1.33E-02 |
| 92 | GO:0010030: positive regulation of seed germination | 1.38E-02 |
| 93 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.49E-02 |
| 94 | GO:0006071: glycerol metabolic process | 1.49E-02 |
| 95 | GO:0051017: actin filament bundle assembly | 1.60E-02 |
| 96 | GO:0000027: ribosomal large subunit assembly | 1.60E-02 |
| 97 | GO:0010026: trichome differentiation | 1.72E-02 |
| 98 | GO:0007017: microtubule-based process | 1.72E-02 |
| 99 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.82E-02 |
| 100 | GO:0016226: iron-sulfur cluster assembly | 1.96E-02 |
| 101 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.35E-02 |
| 102 | GO:0008033: tRNA processing | 2.48E-02 |
| 103 | GO:0000413: protein peptidyl-prolyl isomerization | 2.48E-02 |
| 104 | GO:0042631: cellular response to water deprivation | 2.48E-02 |
| 105 | GO:0042335: cuticle development | 2.48E-02 |
| 106 | GO:0010182: sugar mediated signaling pathway | 2.62E-02 |
| 107 | GO:0008360: regulation of cell shape | 2.62E-02 |
| 108 | GO:0009958: positive gravitropism | 2.62E-02 |
| 109 | GO:0016042: lipid catabolic process | 2.75E-02 |
| 110 | GO:0006814: sodium ion transport | 2.76E-02 |
| 111 | GO:0071554: cell wall organization or biogenesis | 3.04E-02 |
| 112 | GO:0002229: defense response to oomycetes | 3.04E-02 |
| 113 | GO:0000302: response to reactive oxygen species | 3.04E-02 |
| 114 | GO:0009790: embryo development | 3.09E-02 |
| 115 | GO:0009753: response to jasmonic acid | 3.11E-02 |
| 116 | GO:0010583: response to cyclopentenone | 3.19E-02 |
| 117 | GO:0016125: sterol metabolic process | 3.49E-02 |
| 118 | GO:0016126: sterol biosynthetic process | 3.95E-02 |
| 119 | GO:0009739: response to gibberellin | 4.08E-02 |
| 120 | GO:0042128: nitrate assimilation | 4.27E-02 |
| 121 | GO:0016311: dephosphorylation | 4.60E-02 |
| 122 | GO:0018298: protein-chromophore linkage | 4.77E-02 |
| 123 | GO:0009817: defense response to fungus, incompatible interaction | 4.77E-02 |
| 124 | GO:0071555: cell wall organization | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0004496: mevalonate kinase activity | 0.00E+00 |
| 3 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 4 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 5 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 6 | GO:0019843: rRNA binding | 4.35E-12 |
| 7 | GO:0016851: magnesium chelatase activity | 1.52E-07 |
| 8 | GO:0003735: structural constituent of ribosome | 3.17E-06 |
| 9 | GO:0051920: peroxiredoxin activity | 1.88E-04 |
| 10 | GO:0052689: carboxylic ester hydrolase activity | 2.30E-04 |
| 11 | GO:0004328: formamidase activity | 3.04E-04 |
| 12 | GO:0004560: alpha-L-fucosidase activity | 3.04E-04 |
| 13 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.04E-04 |
| 14 | GO:0004853: uroporphyrinogen decarboxylase activity | 3.04E-04 |
| 15 | GO:0045485: omega-6 fatty acid desaturase activity | 3.04E-04 |
| 16 | GO:0009374: biotin binding | 3.04E-04 |
| 17 | GO:0016209: antioxidant activity | 3.09E-04 |
| 18 | GO:0016788: hydrolase activity, acting on ester bonds | 6.45E-04 |
| 19 | GO:0008883: glutamyl-tRNA reductase activity | 6.66E-04 |
| 20 | GO:0004047: aminomethyltransferase activity | 6.66E-04 |
| 21 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 6.66E-04 |
| 22 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 6.66E-04 |
| 23 | GO:0030267: glyoxylate reductase (NADP) activity | 1.08E-03 |
| 24 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.08E-03 |
| 25 | GO:0005528: FK506 binding | 1.45E-03 |
| 26 | GO:0043023: ribosomal large subunit binding | 1.55E-03 |
| 27 | GO:0008097: 5S rRNA binding | 1.55E-03 |
| 28 | GO:0008508: bile acid:sodium symporter activity | 1.55E-03 |
| 29 | GO:0001872: (1->3)-beta-D-glucan binding | 1.55E-03 |
| 30 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 1.55E-03 |
| 31 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.55E-03 |
| 32 | GO:0035250: UDP-galactosyltransferase activity | 1.55E-03 |
| 33 | GO:0016149: translation release factor activity, codon specific | 1.55E-03 |
| 34 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.55E-03 |
| 35 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.02E-03 |
| 36 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 2.07E-03 |
| 37 | GO:0004659: prenyltransferase activity | 2.07E-03 |
| 38 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.07E-03 |
| 39 | GO:0016836: hydro-lyase activity | 2.07E-03 |
| 40 | GO:0052793: pectin acetylesterase activity | 2.07E-03 |
| 41 | GO:0003989: acetyl-CoA carboxylase activity | 2.65E-03 |
| 42 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.27E-03 |
| 43 | GO:0004130: cytochrome-c peroxidase activity | 3.27E-03 |
| 44 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.27E-03 |
| 45 | GO:0016208: AMP binding | 3.27E-03 |
| 46 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.55E-03 |
| 47 | GO:0102391: decanoate--CoA ligase activity | 3.93E-03 |
| 48 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.93E-03 |
| 49 | GO:0004467: long-chain fatty acid-CoA ligase activity | 4.64E-03 |
| 50 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 5.22E-03 |
| 51 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 6.04E-03 |
| 52 | GO:0008236: serine-type peptidase activity | 6.36E-03 |
| 53 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.69E-03 |
| 54 | GO:0003747: translation release factor activity | 7.01E-03 |
| 55 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 7.01E-03 |
| 56 | GO:0003993: acid phosphatase activity | 8.87E-03 |
| 57 | GO:0050661: NADP binding | 9.68E-03 |
| 58 | GO:0047372: acylglycerol lipase activity | 9.71E-03 |
| 59 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 9.71E-03 |
| 60 | GO:0008378: galactosyltransferase activity | 1.07E-02 |
| 61 | GO:0004089: carbonate dehydratase activity | 1.17E-02 |
| 62 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.17E-02 |
| 63 | GO:0004601: peroxidase activity | 1.33E-02 |
| 64 | GO:0003690: double-stranded DNA binding | 1.53E-02 |
| 65 | GO:0051536: iron-sulfur cluster binding | 1.60E-02 |
| 66 | GO:0022891: substrate-specific transmembrane transporter activity | 2.09E-02 |
| 67 | GO:0003727: single-stranded RNA binding | 2.22E-02 |
| 68 | GO:0008514: organic anion transmembrane transporter activity | 2.22E-02 |
| 69 | GO:0016758: transferase activity, transferring hexosyl groups | 2.58E-02 |
| 70 | GO:0003713: transcription coactivator activity | 2.62E-02 |
| 71 | GO:0008080: N-acetyltransferase activity | 2.62E-02 |
| 72 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.64E-02 |
| 73 | GO:0003924: GTPase activity | 2.85E-02 |
| 74 | GO:0004872: receptor activity | 2.90E-02 |
| 75 | GO:0051015: actin filament binding | 3.33E-02 |
| 76 | GO:0016791: phosphatase activity | 3.49E-02 |
| 77 | GO:0005200: structural constituent of cytoskeleton | 3.64E-02 |
| 78 | GO:0008483: transaminase activity | 3.64E-02 |
| 79 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.64E-02 |
| 80 | GO:0008237: metallopeptidase activity | 3.64E-02 |
| 81 | GO:0016413: O-acetyltransferase activity | 3.79E-02 |
| 82 | GO:0016597: amino acid binding | 3.79E-02 |
| 83 | GO:0016168: chlorophyll binding | 4.11E-02 |
| 84 | GO:0030247: polysaccharide binding | 4.44E-02 |
| 85 | GO:0005096: GTPase activator activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070971: endoplasmic reticulum exit site | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.73E-34 |
| 3 | GO:0009570: chloroplast stroma | 8.13E-17 |
| 4 | GO:0009941: chloroplast envelope | 1.00E-14 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.00E-12 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 4.35E-12 |
| 7 | GO:0031977: thylakoid lumen | 3.14E-11 |
| 8 | GO:0009579: thylakoid | 2.62E-10 |
| 9 | GO:0009534: chloroplast thylakoid | 2.79E-10 |
| 10 | GO:0010007: magnesium chelatase complex | 3.14E-08 |
| 11 | GO:0005840: ribosome | 7.46E-07 |
| 12 | GO:0031969: chloroplast membrane | 2.63E-05 |
| 13 | GO:0031225: anchored component of membrane | 5.60E-05 |
| 14 | GO:0009536: plastid | 5.74E-05 |
| 15 | GO:0046658: anchored component of plasma membrane | 7.58E-05 |
| 16 | GO:0009505: plant-type cell wall | 2.58E-04 |
| 17 | GO:0009515: granal stacked thylakoid | 3.04E-04 |
| 18 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 3.04E-04 |
| 19 | GO:0009706: chloroplast inner membrane | 6.58E-04 |
| 20 | GO:0009317: acetyl-CoA carboxylase complex | 1.08E-03 |
| 21 | GO:0032432: actin filament bundle | 1.55E-03 |
| 22 | GO:0005960: glycine cleavage complex | 1.55E-03 |
| 23 | GO:0048046: apoplast | 1.61E-03 |
| 24 | GO:0022626: cytosolic ribosome | 4.57E-03 |
| 25 | GO:0009533: chloroplast stromal thylakoid | 4.64E-03 |
| 26 | GO:0005618: cell wall | 5.27E-03 |
| 27 | GO:0005763: mitochondrial small ribosomal subunit | 7.01E-03 |
| 28 | GO:0045298: tubulin complex | 7.01E-03 |
| 29 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 7.01E-03 |
| 30 | GO:0015934: large ribosomal subunit | 7.74E-03 |
| 31 | GO:0005884: actin filament | 9.71E-03 |
| 32 | GO:0000311: plastid large ribosomal subunit | 1.07E-02 |
| 33 | GO:0009508: plastid chromosome | 1.17E-02 |
| 34 | GO:0043234: protein complex | 1.49E-02 |
| 35 | GO:0042651: thylakoid membrane | 1.72E-02 |
| 36 | GO:0015935: small ribosomal subunit | 1.84E-02 |
| 37 | GO:0016020: membrane | 2.35E-02 |
| 38 | GO:0009523: photosystem II | 2.90E-02 |
| 39 | GO:0019898: extrinsic component of membrane | 2.90E-02 |
| 40 | GO:0005778: peroxisomal membrane | 3.64E-02 |
| 41 | GO:0009295: nucleoid | 3.64E-02 |