| Rank | GO Term | Adjusted P value |
|---|
| 1 | GO:0097164: ammonium ion metabolic process | 0.00E+00 |
| 2 | GO:0070981: L-asparagine biosynthetic process | 3.65E-05 |
| 3 | GO:0006529: asparagine biosynthetic process | 3.65E-05 |
| 4 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.55E-05 |
| 5 | GO:0000160: phosphorelay signal transduction system | 1.23E-04 |
| 6 | GO:0006564: L-serine biosynthetic process | 1.78E-04 |
| 7 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.78E-04 |
| 8 | GO:0016554: cytidine to uridine editing | 2.22E-04 |
| 9 | GO:0009736: cytokinin-activated signaling pathway | 2.68E-04 |
| 10 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 3.15E-04 |
| 11 | GO:0010078: maintenance of root meristem identity | 3.65E-04 |
| 12 | GO:0032544: plastid translation | 4.16E-04 |
| 13 | GO:0043562: cellular response to nitrogen levels | 4.16E-04 |
| 14 | GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process | 5.23E-04 |
| 15 | GO:1900865: chloroplast RNA modification | 5.23E-04 |
| 16 | GO:0030148: sphingolipid biosynthetic process | 6.34E-04 |
| 17 | GO:0009684: indoleacetic acid biosynthetic process | 6.34E-04 |
| 18 | GO:0006415: translational termination | 6.34E-04 |
| 19 | GO:0010588: cotyledon vascular tissue pattern formation | 7.52E-04 |
| 20 | GO:0048467: gynoecium development | 8.13E-04 |
| 21 | GO:0006541: glutamine metabolic process | 8.13E-04 |
| 22 | GO:0019915: lipid storage | 1.13E-03 |
| 23 | GO:0070417: cellular response to cold | 1.41E-03 |
| 24 | GO:0080022: primary root development | 1.49E-03 |
| 25 | GO:0010087: phloem or xylem histogenesis | 1.49E-03 |
| 26 | GO:0009958: positive gravitropism | 1.56E-03 |
| 27 | GO:0009646: response to absence of light | 1.64E-03 |
| 28 | GO:0048825: cotyledon development | 1.72E-03 |
| 29 | GO:0009851: auxin biosynthetic process | 1.72E-03 |
| 30 | GO:0010583: response to cyclopentenone | 1.88E-03 |
| 31 | GO:0010027: thylakoid membrane organization | 2.30E-03 |
| 32 | GO:0009735: response to cytokinin | 2.80E-03 |
| 33 | GO:0048527: lateral root development | 3.03E-03 |
| 34 | GO:0016051: carbohydrate biosynthetic process | 3.22E-03 |
| 35 | GO:0010114: response to red light | 3.83E-03 |
| 36 | GO:0042538: hyperosmotic salinity response | 4.47E-03 |
| 37 | GO:0048367: shoot system development | 5.38E-03 |
| 38 | GO:0040008: regulation of growth | 8.46E-03 |
| 39 | GO:0007623: circadian rhythm | 8.74E-03 |
| 40 | GO:0009451: RNA modification | 8.88E-03 |
| 41 | GO:0009658: chloroplast organization | 1.19E-02 |
| 42 | GO:0009723: response to ethylene | 1.32E-02 |
| 43 | GO:0009793: embryo development ending in seed dormancy | 1.43E-02 |
| 44 | GO:0045454: cell redox homeostasis | 1.57E-02 |
| 45 | GO:0055114: oxidation-reduction process | 1.68E-02 |
| 46 | GO:0006629: lipid metabolic process | 1.82E-02 |
| 47 | GO:0009908: flower development | 2.55E-02 |
| 48 | GO:0042742: defense response to bacterium | 4.54E-02 |