GO Enrichment Analysis of Co-expressed Genes with
AT2G26340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 1.56E-06 |
| 6 | GO:0009773: photosynthetic electron transport in photosystem I | 1.61E-06 |
| 7 | GO:0032544: plastid translation | 2.05E-05 |
| 8 | GO:0010206: photosystem II repair | 2.81E-05 |
| 9 | GO:0080170: hydrogen peroxide transmembrane transport | 4.98E-05 |
| 10 | GO:0006412: translation | 1.14E-04 |
| 11 | GO:0009735: response to cytokinin | 1.50E-04 |
| 12 | GO:0042549: photosystem II stabilization | 1.97E-04 |
| 13 | GO:0010019: chloroplast-nucleus signaling pathway | 2.66E-04 |
| 14 | GO:0006810: transport | 3.24E-04 |
| 15 | GO:0034337: RNA folding | 3.81E-04 |
| 16 | GO:0010450: inflorescence meristem growth | 3.81E-04 |
| 17 | GO:0071588: hydrogen peroxide mediated signaling pathway | 3.81E-04 |
| 18 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.81E-04 |
| 19 | GO:0000476: maturation of 4.5S rRNA | 3.81E-04 |
| 20 | GO:0000967: rRNA 5'-end processing | 3.81E-04 |
| 21 | GO:0000481: maturation of 5S rRNA | 3.81E-04 |
| 22 | GO:0042371: vitamin K biosynthetic process | 3.81E-04 |
| 23 | GO:0034220: ion transmembrane transport | 4.22E-04 |
| 24 | GO:0009644: response to high light intensity | 4.53E-04 |
| 25 | GO:0010205: photoinhibition | 7.45E-04 |
| 26 | GO:0009638: phototropism | 7.45E-04 |
| 27 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 8.27E-04 |
| 28 | GO:0034470: ncRNA processing | 8.27E-04 |
| 29 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 8.27E-04 |
| 30 | GO:0034755: iron ion transmembrane transport | 8.27E-04 |
| 31 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 8.27E-04 |
| 32 | GO:0008152: metabolic process | 1.02E-03 |
| 33 | GO:0015995: chlorophyll biosynthetic process | 1.19E-03 |
| 34 | GO:0006000: fructose metabolic process | 1.34E-03 |
| 35 | GO:0006013: mannose metabolic process | 1.34E-03 |
| 36 | GO:2001295: malonyl-CoA biosynthetic process | 1.34E-03 |
| 37 | GO:0045165: cell fate commitment | 1.34E-03 |
| 38 | GO:0010207: photosystem II assembly | 1.46E-03 |
| 39 | GO:0006833: water transport | 1.82E-03 |
| 40 | GO:1902476: chloride transmembrane transport | 1.93E-03 |
| 41 | GO:0051513: regulation of monopolar cell growth | 1.93E-03 |
| 42 | GO:2001141: regulation of RNA biosynthetic process | 1.93E-03 |
| 43 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.93E-03 |
| 44 | GO:0010023: proanthocyanidin biosynthetic process | 2.60E-03 |
| 45 | GO:0045727: positive regulation of translation | 2.60E-03 |
| 46 | GO:0015994: chlorophyll metabolic process | 2.60E-03 |
| 47 | GO:0030104: water homeostasis | 2.60E-03 |
| 48 | GO:0006546: glycine catabolic process | 2.60E-03 |
| 49 | GO:1902183: regulation of shoot apical meristem development | 3.32E-03 |
| 50 | GO:0010158: abaxial cell fate specification | 3.32E-03 |
| 51 | GO:0009247: glycolipid biosynthetic process | 3.32E-03 |
| 52 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.32E-03 |
| 53 | GO:0006461: protein complex assembly | 3.32E-03 |
| 54 | GO:0009585: red, far-red light phototransduction | 3.70E-03 |
| 55 | GO:0000413: protein peptidyl-prolyl isomerization | 3.72E-03 |
| 56 | GO:0000470: maturation of LSU-rRNA | 4.11E-03 |
| 57 | GO:0016554: cytidine to uridine editing | 4.11E-03 |
| 58 | GO:0032973: amino acid export | 4.11E-03 |
| 59 | GO:1902456: regulation of stomatal opening | 4.11E-03 |
| 60 | GO:0000741: karyogamy | 4.11E-03 |
| 61 | GO:0010190: cytochrome b6f complex assembly | 4.11E-03 |
| 62 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 4.11E-03 |
| 63 | GO:0006751: glutathione catabolic process | 4.11E-03 |
| 64 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 4.95E-03 |
| 65 | GO:0000302: response to reactive oxygen species | 4.95E-03 |
| 66 | GO:0042254: ribosome biogenesis | 5.01E-03 |
| 67 | GO:0042545: cell wall modification | 5.59E-03 |
| 68 | GO:0043090: amino acid import | 5.85E-03 |
| 69 | GO:0010196: nonphotochemical quenching | 5.85E-03 |
| 70 | GO:0006821: chloride transport | 5.85E-03 |
| 71 | GO:0050829: defense response to Gram-negative bacterium | 5.85E-03 |
| 72 | GO:1900057: positive regulation of leaf senescence | 5.85E-03 |
| 73 | GO:0009645: response to low light intensity stimulus | 5.85E-03 |
| 74 | GO:0006402: mRNA catabolic process | 6.80E-03 |
| 75 | GO:0030091: protein repair | 6.80E-03 |
| 76 | GO:0009850: auxin metabolic process | 6.80E-03 |
| 77 | GO:0019375: galactolipid biosynthetic process | 6.80E-03 |
| 78 | GO:0032508: DNA duplex unwinding | 6.80E-03 |
| 79 | GO:0010492: maintenance of shoot apical meristem identity | 6.80E-03 |
| 80 | GO:0009231: riboflavin biosynthetic process | 6.80E-03 |
| 81 | GO:0010093: specification of floral organ identity | 7.80E-03 |
| 82 | GO:0009932: cell tip growth | 7.80E-03 |
| 83 | GO:0006002: fructose 6-phosphate metabolic process | 7.80E-03 |
| 84 | GO:0071482: cellular response to light stimulus | 7.80E-03 |
| 85 | GO:0009657: plastid organization | 7.80E-03 |
| 86 | GO:0009051: pentose-phosphate shunt, oxidative branch | 8.86E-03 |
| 87 | GO:0009821: alkaloid biosynthetic process | 8.86E-03 |
| 88 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 8.86E-03 |
| 89 | GO:0048507: meristem development | 8.86E-03 |
| 90 | GO:0080144: amino acid homeostasis | 8.86E-03 |
| 91 | GO:2000024: regulation of leaf development | 8.86E-03 |
| 92 | GO:0042744: hydrogen peroxide catabolic process | 9.13E-03 |
| 93 | GO:0018298: protein-chromophore linkage | 9.36E-03 |
| 94 | GO:1900865: chloroplast RNA modification | 9.96E-03 |
| 95 | GO:0048829: root cap development | 1.11E-02 |
| 96 | GO:0045490: pectin catabolic process | 1.17E-02 |
| 97 | GO:0009698: phenylpropanoid metabolic process | 1.23E-02 |
| 98 | GO:0019684: photosynthesis, light reaction | 1.23E-02 |
| 99 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.23E-02 |
| 100 | GO:0009073: aromatic amino acid family biosynthetic process | 1.23E-02 |
| 101 | GO:0043085: positive regulation of catalytic activity | 1.23E-02 |
| 102 | GO:0006879: cellular iron ion homeostasis | 1.23E-02 |
| 103 | GO:0006352: DNA-templated transcription, initiation | 1.23E-02 |
| 104 | GO:0009750: response to fructose | 1.23E-02 |
| 105 | GO:0034599: cellular response to oxidative stress | 1.24E-02 |
| 106 | GO:0005983: starch catabolic process | 1.36E-02 |
| 107 | GO:0015706: nitrate transport | 1.36E-02 |
| 108 | GO:0006094: gluconeogenesis | 1.48E-02 |
| 109 | GO:0009767: photosynthetic electron transport chain | 1.48E-02 |
| 110 | GO:0005986: sucrose biosynthetic process | 1.48E-02 |
| 111 | GO:0006006: glucose metabolic process | 1.48E-02 |
| 112 | GO:2000028: regulation of photoperiodism, flowering | 1.48E-02 |
| 113 | GO:0009718: anthocyanin-containing compound biosynthetic process | 1.48E-02 |
| 114 | GO:0010114: response to red light | 1.54E-02 |
| 115 | GO:0009933: meristem structural organization | 1.62E-02 |
| 116 | GO:0010167: response to nitrate | 1.75E-02 |
| 117 | GO:0010030: positive regulation of seed germination | 1.75E-02 |
| 118 | GO:0010053: root epidermal cell differentiation | 1.75E-02 |
| 119 | GO:0006636: unsaturated fatty acid biosynthetic process | 1.89E-02 |
| 120 | GO:0009658: chloroplast organization | 2.03E-02 |
| 121 | GO:0009944: polarity specification of adaxial/abaxial axis | 2.04E-02 |
| 122 | GO:0005992: trehalose biosynthetic process | 2.04E-02 |
| 123 | GO:0006364: rRNA processing | 2.08E-02 |
| 124 | GO:0006418: tRNA aminoacylation for protein translation | 2.19E-02 |
| 125 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.19E-02 |
| 126 | GO:0061077: chaperone-mediated protein folding | 2.34E-02 |
| 127 | GO:0003333: amino acid transmembrane transport | 2.34E-02 |
| 128 | GO:0009723: response to ethylene | 2.44E-02 |
| 129 | GO:0010017: red or far-red light signaling pathway | 2.50E-02 |
| 130 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.98E-02 |
| 131 | GO:0042631: cellular response to water deprivation | 3.15E-02 |
| 132 | GO:0010087: phloem or xylem histogenesis | 3.15E-02 |
| 133 | GO:0045454: cell redox homeostasis | 3.33E-02 |
| 134 | GO:0010154: fruit development | 3.33E-02 |
| 135 | GO:0009958: positive gravitropism | 3.33E-02 |
| 136 | GO:0010197: polar nucleus fusion | 3.33E-02 |
| 137 | GO:0002229: defense response to oomycetes | 3.86E-02 |
| 138 | GO:0010193: response to ozone | 3.86E-02 |
| 139 | GO:0030163: protein catabolic process | 4.24E-02 |
| 140 | GO:0071281: cellular response to iron ion | 4.24E-02 |
| 141 | GO:0071805: potassium ion transmembrane transport | 4.62E-02 |
| 142 | GO:0006633: fatty acid biosynthetic process | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 4 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 6 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 7 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 8 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.47E-11 |
| 9 | GO:0019843: rRNA binding | 2.70E-11 |
| 10 | GO:0005528: FK506 binding | 5.44E-11 |
| 11 | GO:0003735: structural constituent of ribosome | 3.51E-06 |
| 12 | GO:0016787: hydrolase activity | 2.51E-05 |
| 13 | GO:0004130: cytochrome-c peroxidase activity | 1.97E-04 |
| 14 | GO:0046906: tetrapyrrole binding | 3.81E-04 |
| 15 | GO:0009671: nitrate:proton symporter activity | 3.81E-04 |
| 16 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 3.81E-04 |
| 17 | GO:0045485: omega-6 fatty acid desaturase activity | 3.81E-04 |
| 18 | GO:0003839: gamma-glutamylcyclotransferase activity | 8.27E-04 |
| 19 | GO:0005094: Rho GDP-dissociation inhibitor activity | 8.27E-04 |
| 20 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 8.27E-04 |
| 21 | GO:0004047: aminomethyltransferase activity | 8.27E-04 |
| 22 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 8.27E-04 |
| 23 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 8.27E-04 |
| 24 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 8.27E-04 |
| 25 | GO:0015929: hexosaminidase activity | 8.27E-04 |
| 26 | GO:0004563: beta-N-acetylhexosaminidase activity | 8.27E-04 |
| 27 | GO:0008967: phosphoglycolate phosphatase activity | 8.27E-04 |
| 28 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 8.27E-04 |
| 29 | GO:0047746: chlorophyllase activity | 8.27E-04 |
| 30 | GO:0016868: intramolecular transferase activity, phosphotransferases | 8.27E-04 |
| 31 | GO:0015250: water channel activity | 9.72E-04 |
| 32 | GO:0031072: heat shock protein binding | 1.29E-03 |
| 33 | GO:0002161: aminoacyl-tRNA editing activity | 1.34E-03 |
| 34 | GO:0003935: GTP cyclohydrolase II activity | 1.34E-03 |
| 35 | GO:0004075: biotin carboxylase activity | 1.34E-03 |
| 36 | GO:0008266: poly(U) RNA binding | 1.46E-03 |
| 37 | GO:0001872: (1->3)-beta-D-glucan binding | 1.93E-03 |
| 38 | GO:0035250: UDP-galactosyltransferase activity | 1.93E-03 |
| 39 | GO:0016851: magnesium chelatase activity | 1.93E-03 |
| 40 | GO:0001053: plastid sigma factor activity | 2.60E-03 |
| 41 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.60E-03 |
| 42 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.60E-03 |
| 43 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 2.60E-03 |
| 44 | GO:0016987: sigma factor activity | 2.60E-03 |
| 45 | GO:0010328: auxin influx transmembrane transporter activity | 2.60E-03 |
| 46 | GO:0005253: anion channel activity | 2.60E-03 |
| 47 | GO:0003756: protein disulfide isomerase activity | 3.17E-03 |
| 48 | GO:0003989: acetyl-CoA carboxylase activity | 3.32E-03 |
| 49 | GO:0042578: phosphoric ester hydrolase activity | 4.11E-03 |
| 50 | GO:0016688: L-ascorbate peroxidase activity | 4.11E-03 |
| 51 | GO:0005247: voltage-gated chloride channel activity | 4.11E-03 |
| 52 | GO:0045330: aspartyl esterase activity | 4.22E-03 |
| 53 | GO:0051920: peroxiredoxin activity | 4.95E-03 |
| 54 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 4.95E-03 |
| 55 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 4.95E-03 |
| 56 | GO:0004559: alpha-mannosidase activity | 4.95E-03 |
| 57 | GO:0030599: pectinesterase activity | 5.38E-03 |
| 58 | GO:0019899: enzyme binding | 5.85E-03 |
| 59 | GO:0016209: antioxidant activity | 6.80E-03 |
| 60 | GO:0004033: aldo-keto reductase (NADP) activity | 6.80E-03 |
| 61 | GO:0043022: ribosome binding | 6.80E-03 |
| 62 | GO:0016168: chlorophyll binding | 7.58E-03 |
| 63 | GO:0008236: serine-type peptidase activity | 8.90E-03 |
| 64 | GO:0005096: GTPase activator activity | 9.84E-03 |
| 65 | GO:0005381: iron ion transmembrane transporter activity | 9.96E-03 |
| 66 | GO:0016844: strictosidine synthase activity | 9.96E-03 |
| 67 | GO:0015112: nitrate transmembrane transporter activity | 9.96E-03 |
| 68 | GO:0004805: trehalose-phosphatase activity | 1.11E-02 |
| 69 | GO:0046872: metal ion binding | 1.19E-02 |
| 70 | GO:0000049: tRNA binding | 1.36E-02 |
| 71 | GO:0004565: beta-galactosidase activity | 1.48E-02 |
| 72 | GO:0004185: serine-type carboxypeptidase activity | 1.54E-02 |
| 73 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.66E-02 |
| 74 | GO:0015293: symporter activity | 1.73E-02 |
| 75 | GO:0008146: sulfotransferase activity | 1.75E-02 |
| 76 | GO:0031409: pigment binding | 1.89E-02 |
| 77 | GO:0004601: peroxidase activity | 2.03E-02 |
| 78 | GO:0015079: potassium ion transmembrane transporter activity | 2.19E-02 |
| 79 | GO:0015171: amino acid transmembrane transporter activity | 2.30E-02 |
| 80 | GO:0004176: ATP-dependent peptidase activity | 2.34E-02 |
| 81 | GO:0022891: substrate-specific transmembrane transporter activity | 2.65E-02 |
| 82 | GO:0051082: unfolded protein binding | 2.96E-02 |
| 83 | GO:0004812: aminoacyl-tRNA ligase activity | 2.98E-02 |
| 84 | GO:0050662: coenzyme binding | 3.50E-02 |
| 85 | GO:0005215: transporter activity | 3.51E-02 |
| 86 | GO:0004871: signal transducer activity | 3.53E-02 |
| 87 | GO:0048038: quinone binding | 3.86E-02 |
| 88 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 3.86E-02 |
| 89 | GO:0004518: nuclease activity | 4.05E-02 |
| 90 | GO:0004252: serine-type endopeptidase activity | 4.10E-02 |
| 91 | GO:0000156: phosphorelay response regulator activity | 4.24E-02 |
| 92 | GO:0008483: transaminase activity | 4.62E-02 |
| 93 | GO:0016491: oxidoreductase activity | 4.66E-02 |
| 94 | GO:0046910: pectinesterase inhibitor activity | 4.74E-02 |
| 95 | GO:0004519: endonuclease activity | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 6.03E-50 |
| 4 | GO:0009570: chloroplast stroma | 1.12E-28 |
| 5 | GO:0009534: chloroplast thylakoid | 1.09E-27 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 1.49E-25 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 6.27E-22 |
| 8 | GO:0009941: chloroplast envelope | 1.24E-18 |
| 9 | GO:0009579: thylakoid | 7.21E-15 |
| 10 | GO:0031977: thylakoid lumen | 1.44E-10 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.42E-09 |
| 12 | GO:0030095: chloroplast photosystem II | 7.94E-08 |
| 13 | GO:0005840: ribosome | 4.16E-06 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 9.55E-06 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 2.10E-04 |
| 16 | GO:0009782: photosystem I antenna complex | 3.81E-04 |
| 17 | GO:0043674: columella | 3.81E-04 |
| 18 | GO:0009344: nitrite reductase complex [NAD(P)H] | 3.81E-04 |
| 19 | GO:0009547: plastid ribosome | 3.81E-04 |
| 20 | GO:0009523: photosystem II | 5.60E-04 |
| 21 | GO:0019898: extrinsic component of membrane | 5.60E-04 |
| 22 | GO:0009505: plant-type cell wall | 6.53E-04 |
| 23 | GO:0080085: signal recognition particle, chloroplast targeting | 8.27E-04 |
| 24 | GO:0000311: plastid large ribosomal subunit | 1.14E-03 |
| 25 | GO:0010007: magnesium chelatase complex | 1.34E-03 |
| 26 | GO:0000312: plastid small ribosomal subunit | 1.46E-03 |
| 27 | GO:0009531: secondary cell wall | 1.93E-03 |
| 28 | GO:0042651: thylakoid membrane | 2.22E-03 |
| 29 | GO:0034707: chloride channel complex | 4.11E-03 |
| 30 | GO:0016020: membrane | 5.64E-03 |
| 31 | GO:0009706: chloroplast inner membrane | 5.80E-03 |
| 32 | GO:0042807: central vacuole | 5.85E-03 |
| 33 | GO:0009295: nucleoid | 6.37E-03 |
| 34 | GO:0009538: photosystem I reaction center | 6.80E-03 |
| 35 | GO:0010287: plastoglobule | 7.22E-03 |
| 36 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 7.80E-03 |
| 37 | GO:0008180: COP9 signalosome | 8.86E-03 |
| 38 | GO:0015934: large ribosomal subunit | 1.08E-02 |
| 39 | GO:0032040: small-subunit processome | 1.36E-02 |
| 40 | GO:0009508: plastid chromosome | 1.48E-02 |
| 41 | GO:0046658: anchored component of plasma membrane | 1.67E-02 |
| 42 | GO:0030076: light-harvesting complex | 1.75E-02 |
| 43 | GO:0015935: small ribosomal subunit | 2.34E-02 |
| 44 | GO:0031969: chloroplast membrane | 2.66E-02 |
| 45 | GO:0005618: cell wall | 2.82E-02 |
| 46 | GO:0016592: mediator complex | 4.05E-02 |
| 47 | GO:0071944: cell periphery | 4.24E-02 |
| 48 | GO:0010319: stromule | 4.62E-02 |
| 49 | GO:0043231: intracellular membrane-bounded organelle | 4.85E-02 |