GO Enrichment Analysis of Co-expressed Genes with
AT2G22980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0015979: photosynthesis | 5.44E-11 |
| 3 | GO:0015976: carbon utilization | 5.37E-06 |
| 4 | GO:0009735: response to cytokinin | 1.07E-05 |
| 5 | GO:0042549: photosystem II stabilization | 1.38E-05 |
| 6 | GO:0006949: syncytium formation | 8.25E-05 |
| 7 | GO:0009773: photosynthetic electron transport in photosystem I | 9.76E-05 |
| 8 | GO:0009750: response to fructose | 9.76E-05 |
| 9 | GO:0006094: gluconeogenesis | 1.31E-04 |
| 10 | GO:0010207: photosystem II assembly | 1.50E-04 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.77E-04 |
| 12 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.37E-04 |
| 13 | GO:0006000: fructose metabolic process | 2.99E-04 |
| 14 | GO:1902476: chloride transmembrane transport | 4.32E-04 |
| 15 | GO:0051513: regulation of monopolar cell growth | 4.32E-04 |
| 16 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 4.32E-04 |
| 17 | GO:2001141: regulation of RNA biosynthetic process | 4.32E-04 |
| 18 | GO:0045727: positive regulation of translation | 5.75E-04 |
| 19 | GO:0015994: chlorophyll metabolic process | 5.75E-04 |
| 20 | GO:2000122: negative regulation of stomatal complex development | 5.75E-04 |
| 21 | GO:0010037: response to carbon dioxide | 5.75E-04 |
| 22 | GO:0009828: plant-type cell wall loosening | 6.38E-04 |
| 23 | GO:0006461: protein complex assembly | 7.29E-04 |
| 24 | GO:1902456: regulation of stomatal opening | 8.91E-04 |
| 25 | GO:0018298: protein-chromophore linkage | 9.73E-04 |
| 26 | GO:0009826: unidimensional cell growth | 1.04E-03 |
| 27 | GO:0010119: regulation of stomatal movement | 1.12E-03 |
| 28 | GO:0010196: nonphotochemical quenching | 1.24E-03 |
| 29 | GO:0006821: chloride transport | 1.24E-03 |
| 30 | GO:0008610: lipid biosynthetic process | 1.43E-03 |
| 31 | GO:0046620: regulation of organ growth | 1.43E-03 |
| 32 | GO:0030091: protein repair | 1.43E-03 |
| 33 | GO:0010492: maintenance of shoot apical meristem identity | 1.43E-03 |
| 34 | GO:0009744: response to sucrose | 1.56E-03 |
| 35 | GO:0010114: response to red light | 1.56E-03 |
| 36 | GO:0006002: fructose 6-phosphate metabolic process | 1.63E-03 |
| 37 | GO:0071482: cellular response to light stimulus | 1.63E-03 |
| 38 | GO:0009657: plastid organization | 1.63E-03 |
| 39 | GO:0032544: plastid translation | 1.63E-03 |
| 40 | GO:0048507: meristem development | 1.83E-03 |
| 41 | GO:0010206: photosystem II repair | 1.83E-03 |
| 42 | GO:0009664: plant-type cell wall organization | 1.94E-03 |
| 43 | GO:0009299: mRNA transcription | 2.28E-03 |
| 44 | GO:0009698: phenylpropanoid metabolic process | 2.51E-03 |
| 45 | GO:0006352: DNA-templated transcription, initiation | 2.51E-03 |
| 46 | GO:0006979: response to oxidative stress | 2.56E-03 |
| 47 | GO:0005983: starch catabolic process | 2.75E-03 |
| 48 | GO:0015706: nitrate transport | 2.75E-03 |
| 49 | GO:0009740: gibberellic acid mediated signaling pathway | 2.78E-03 |
| 50 | GO:0009725: response to hormone | 3.00E-03 |
| 51 | GO:0005986: sucrose biosynthetic process | 3.00E-03 |
| 52 | GO:0010143: cutin biosynthetic process | 3.25E-03 |
| 53 | GO:0010167: response to nitrate | 3.51E-03 |
| 54 | GO:0006810: transport | 4.52E-03 |
| 55 | GO:0048511: rhythmic process | 4.63E-03 |
| 56 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.23E-03 |
| 57 | GO:0006284: base-excision repair | 5.54E-03 |
| 58 | GO:0009739: response to gibberellin | 5.66E-03 |
| 59 | GO:0000413: protein peptidyl-prolyl isomerization | 6.18E-03 |
| 60 | GO:0042752: regulation of circadian rhythm | 6.84E-03 |
| 61 | GO:0009749: response to glucose | 7.19E-03 |
| 62 | GO:0008654: phospholipid biosynthetic process | 7.19E-03 |
| 63 | GO:0010193: response to ozone | 7.53E-03 |
| 64 | GO:0042128: nitrate assimilation | 1.05E-02 |
| 65 | GO:0016311: dephosphorylation | 1.13E-02 |
| 66 | GO:0009817: defense response to fungus, incompatible interaction | 1.17E-02 |
| 67 | GO:0042742: defense response to bacterium | 1.18E-02 |
| 68 | GO:0010218: response to far red light | 1.26E-02 |
| 69 | GO:0009637: response to blue light | 1.39E-02 |
| 70 | GO:0009926: auxin polar transport | 1.66E-02 |
| 71 | GO:0006364: rRNA processing | 2.05E-02 |
| 72 | GO:0010224: response to UV-B | 2.10E-02 |
| 73 | GO:0006096: glycolytic process | 2.31E-02 |
| 74 | GO:0009416: response to light stimulus | 2.55E-02 |
| 75 | GO:0042545: cell wall modification | 2.58E-02 |
| 76 | GO:0009611: response to wounding | 2.61E-02 |
| 77 | GO:0009742: brassinosteroid mediated signaling pathway | 2.75E-02 |
| 78 | GO:0040008: regulation of growth | 3.77E-02 |
| 79 | GO:0007623: circadian rhythm | 3.89E-02 |
| 80 | GO:0045490: pectin catabolic process | 3.89E-02 |
| 81 | GO:0010468: regulation of gene expression | 4.41E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 2 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 3 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 7.39E-05 |
| 4 | GO:0009671: nitrate:proton symporter activity | 7.39E-05 |
| 5 | GO:0004089: carbonate dehydratase activity | 1.31E-04 |
| 6 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.61E-04 |
| 7 | GO:0043425: bHLH transcription factor binding | 1.77E-04 |
| 8 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.77E-04 |
| 9 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 1.77E-04 |
| 10 | GO:0008825: cyclopropane-fatty-acyl-phospholipid synthase activity | 1.77E-04 |
| 11 | GO:0047746: chlorophyllase activity | 1.77E-04 |
| 12 | GO:0031409: pigment binding | 1.91E-04 |
| 13 | GO:0005528: FK506 binding | 2.13E-04 |
| 14 | GO:0001053: plastid sigma factor activity | 5.75E-04 |
| 15 | GO:0016987: sigma factor activity | 5.75E-04 |
| 16 | GO:0005253: anion channel activity | 5.75E-04 |
| 17 | GO:0008725: DNA-3-methyladenine glycosylase activity | 7.29E-04 |
| 18 | GO:0016168: chlorophyll binding | 7.97E-04 |
| 19 | GO:0005247: voltage-gated chloride channel activity | 8.91E-04 |
| 20 | GO:0004332: fructose-bisphosphate aldolase activity | 8.91E-04 |
| 21 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 8.91E-04 |
| 22 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.06E-03 |
| 23 | GO:0004602: glutathione peroxidase activity | 1.06E-03 |
| 24 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.68E-03 |
| 25 | GO:0015112: nitrate transmembrane transporter activity | 2.05E-03 |
| 26 | GO:0031072: heat shock protein binding | 3.00E-03 |
| 27 | GO:0008266: poly(U) RNA binding | 3.25E-03 |
| 28 | GO:0008146: sulfotransferase activity | 3.51E-03 |
| 29 | GO:0019843: rRNA binding | 3.68E-03 |
| 30 | GO:0004707: MAP kinase activity | 4.63E-03 |
| 31 | GO:0003756: protein disulfide isomerase activity | 5.54E-03 |
| 32 | GO:0050662: coenzyme binding | 6.84E-03 |
| 33 | GO:0016791: phosphatase activity | 8.61E-03 |
| 34 | GO:0016597: amino acid binding | 9.36E-03 |
| 35 | GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding | 1.13E-02 |
| 36 | GO:0003993: acid phosphatase activity | 1.43E-02 |
| 37 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 1.43E-02 |
| 38 | GO:0004185: serine-type carboxypeptidase activity | 1.66E-02 |
| 39 | GO:0046983: protein dimerization activity | 1.70E-02 |
| 40 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.05E-02 |
| 41 | GO:0045330: aspartyl esterase activity | 2.21E-02 |
| 42 | GO:0016874: ligase activity | 2.53E-02 |
| 43 | GO:0030599: pectinesterase activity | 2.53E-02 |
| 44 | GO:0051082: unfolded protein binding | 2.64E-02 |
| 45 | GO:0016746: transferase activity, transferring acyl groups | 2.69E-02 |
| 46 | GO:0004252: serine-type endopeptidase activity | 3.33E-02 |
| 47 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.70E-02 |
| 48 | GO:0005509: calcium ion binding | 4.74E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 3 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 4.58E-22 |
| 5 | GO:0009534: chloroplast thylakoid | 3.18E-16 |
| 6 | GO:0009507: chloroplast | 4.77E-14 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.82E-11 |
| 8 | GO:0009579: thylakoid | 2.27E-10 |
| 9 | GO:0009941: chloroplast envelope | 3.00E-10 |
| 10 | GO:0030095: chloroplast photosystem II | 2.29E-08 |
| 11 | GO:0009570: chloroplast stroma | 2.49E-07 |
| 12 | GO:0009523: photosystem II | 2.04E-05 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 5.64E-05 |
| 14 | GO:0009783: photosystem II antenna complex | 7.39E-05 |
| 15 | GO:0031977: thylakoid lumen | 1.15E-04 |
| 16 | GO:0009654: photosystem II oxygen evolving complex | 2.37E-04 |
| 17 | GO:0010287: plastoglobule | 3.97E-04 |
| 18 | GO:0009522: photosystem I | 4.63E-04 |
| 19 | GO:0019898: extrinsic component of membrane | 4.95E-04 |
| 20 | GO:0010319: stromule | 6.76E-04 |
| 21 | GO:0034707: chloride channel complex | 8.91E-04 |
| 22 | GO:0009533: chloroplast stromal thylakoid | 1.24E-03 |
| 23 | GO:0042644: chloroplast nucleoid | 1.83E-03 |
| 24 | GO:0009508: plastid chromosome | 3.00E-03 |
| 25 | GO:0030076: light-harvesting complex | 3.51E-03 |
| 26 | GO:0005618: cell wall | 5.80E-03 |
| 27 | GO:0009295: nucleoid | 8.98E-03 |
| 28 | GO:0031969: chloroplast membrane | 9.71E-03 |
| 29 | GO:0015934: large ribosomal subunit | 1.30E-02 |
| 30 | GO:0009505: plant-type cell wall | 1.57E-02 |
| 31 | GO:0016020: membrane | 2.18E-02 |
| 32 | GO:0009706: chloroplast inner membrane | 2.64E-02 |
| 33 | GO:0009705: plant-type vacuole membrane | 3.89E-02 |