Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G22660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032889: regulation of vacuole fusion, non-autophagic0.00E+00
2GO:0016236: macroautophagy0.00E+00
3GO:0010111: glyoxysome organization0.00E+00
4GO:0060154: cellular process regulating host cell cycle in response to virus0.00E+00
5GO:0010401: pectic galactan metabolic process0.00E+00
6GO:0006623: protein targeting to vacuole1.13E-05
7GO:0006914: autophagy1.75E-05
8GO:0034214: protein hexamerization5.64E-05
9GO:0010201: response to continuous far red light stimulus by the high-irradiance response system5.64E-05
10GO:1903648: positive regulation of chlorophyll catabolic process5.64E-05
11GO:0016337: single organismal cell-cell adhesion5.64E-05
12GO:0030242: pexophagy5.64E-05
13GO:0000303: response to superoxide5.64E-05
14GO:0051258: protein polymerization1.37E-04
15GO:0016197: endosomal transport1.37E-04
16GO:0015012: heparan sulfate proteoglycan biosynthetic process1.37E-04
17GO:0042325: regulation of phosphorylation1.37E-04
18GO:0019395: fatty acid oxidation1.37E-04
19GO:0010608: posttranscriptional regulation of gene expression1.37E-04
20GO:0006024: glycosaminoglycan biosynthetic process1.37E-04
21GO:0052541: plant-type cell wall cellulose metabolic process1.37E-04
22GO:0035542: regulation of SNARE complex assembly1.37E-04
23GO:0030433: ubiquitin-dependent ERAD pathway1.99E-04
24GO:0010498: proteasomal protein catabolic process2.34E-04
25GO:0006624: vacuolar protein processing3.41E-04
26GO:0006809: nitric oxide biosynthetic process3.41E-04
27GO:0006635: fatty acid beta-oxidation3.73E-04
28GO:0030163: protein catabolic process4.24E-04
29GO:0045324: late endosome to vacuole transport4.56E-04
30GO:0042594: response to starvation4.56E-04
31GO:0010508: positive regulation of autophagy4.56E-04
32GO:0043097: pyrimidine nucleoside salvage5.78E-04
33GO:0006665: sphingolipid metabolic process5.78E-04
34GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly7.07E-04
35GO:0006206: pyrimidine nucleobase metabolic process7.07E-04
36GO:0000911: cytokinesis by cell plate formation8.44E-04
37GO:0010200: response to chitin9.55E-04
38GO:1900057: positive regulation of leaf senescence9.85E-04
39GO:0006333: chromatin assembly or disassembly9.85E-04
40GO:0009610: response to symbiotic fungus9.85E-04
41GO:0006614: SRP-dependent cotranslational protein targeting to membrane9.85E-04
42GO:0009737: response to abscisic acid1.03E-03
43GO:0006605: protein targeting1.13E-03
44GO:0006979: response to oxidative stress1.47E-03
45GO:0006813: potassium ion transport1.47E-03
46GO:0051603: proteolysis involved in cellular protein catabolic process1.52E-03
47GO:0010629: negative regulation of gene expression1.79E-03
48GO:0006896: Golgi to vacuole transport1.79E-03
49GO:0019538: protein metabolic process1.79E-03
50GO:0016567: protein ubiquitination1.92E-03
51GO:0015031: protein transport2.09E-03
52GO:0012501: programmed cell death2.16E-03
53GO:0010102: lateral root morphogenesis2.36E-03
54GO:0007034: vacuolar transport2.56E-03
55GO:0007033: vacuole organization2.76E-03
56GO:0007031: peroxisome organization2.76E-03
57GO:0009825: multidimensional cell growth2.76E-03
58GO:2000377: regulation of reactive oxygen species metabolic process3.18E-03
59GO:0009695: jasmonic acid biosynthetic process3.40E-03
60GO:0010150: leaf senescence3.55E-03
61GO:0031408: oxylipin biosynthetic process3.63E-03
62GO:0006012: galactose metabolic process4.10E-03
63GO:0009306: protein secretion4.34E-03
64GO:0006511: ubiquitin-dependent protein catabolic process4.49E-03
65GO:0009789: positive regulation of abscisic acid-activated signaling pathway4.58E-03
66GO:0010087: phloem or xylem histogenesis4.83E-03
67GO:0010197: polar nucleus fusion5.09E-03
68GO:0006814: sodium ion transport5.35E-03
69GO:0010193: response to ozone5.88E-03
70GO:0006970: response to osmotic stress5.89E-03
71GO:0016032: viral process6.15E-03
72GO:0009723: response to ethylene6.32E-03
73GO:0006464: cellular protein modification process6.71E-03
74GO:0006904: vesicle docking involved in exocytosis7.00E-03
75GO:0071805: potassium ion transmembrane transport7.00E-03
76GO:0009414: response to water deprivation7.23E-03
77GO:0009615: response to virus7.59E-03
78GO:0009816: defense response to bacterium, incompatible interaction7.89E-03
79GO:0006886: intracellular protein transport8.37E-03
80GO:0009651: response to salt stress9.12E-03
81GO:0008219: cell death9.13E-03
82GO:0009867: jasmonic acid mediated signaling pathway1.08E-02
83GO:0016051: carbohydrate biosynthetic process1.08E-02
84GO:0006099: tricarboxylic acid cycle1.11E-02
85GO:0009873: ethylene-activated signaling pathway1.29E-02
86GO:0006812: cation transport1.51E-02
87GO:0009846: pollen germination1.51E-02
88GO:0042538: hyperosmotic salinity response1.51E-02
89GO:0006486: protein glycosylation1.59E-02
90GO:0009555: pollen development1.78E-02
91GO:0009611: response to wounding1.82E-02
92GO:0009553: embryo sac development2.00E-02
93GO:0051726: regulation of cell cycle2.13E-02
94GO:0009058: biosynthetic process2.49E-02
95GO:0009790: embryo development2.68E-02
96GO:0040008: regulation of growth2.92E-02
97GO:0006508: proteolysis3.07E-02
98GO:0006470: protein dephosphorylation3.32E-02
99GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.91E-02
RankGO TermAdjusted P value
1GO:0009940: amino-terminal vacuolar sorting propeptide binding0.00E+00
2GO:0034450: ubiquitin-ubiquitin ligase activity5.64E-05
3GO:0010209: vacuolar sorting signal binding5.64E-05
4GO:0004175: endopeptidase activity1.02E-04
5GO:0047216: inositol 3-alpha-galactosyltransferase activity1.37E-04
6GO:0003988: acetyl-CoA C-acyltransferase activity1.37E-04
7GO:0005047: signal recognition particle binding2.34E-04
8GO:0000975: regulatory region DNA binding2.34E-04
9GO:0004108: citrate (Si)-synthase activity3.41E-04
10GO:0030527: structural constituent of chromatin3.41E-04
11GO:0005432: calcium:sodium antiporter activity3.41E-04
12GO:0070696: transmembrane receptor protein serine/threonine kinase binding5.78E-04
13GO:0036402: proteasome-activating ATPase activity7.07E-04
14GO:0004849: uridine kinase activity8.44E-04
15GO:0008113: peptide-methionine (S)-S-oxide reductase activity8.44E-04
16GO:0003950: NAD+ ADP-ribosyltransferase activity8.44E-04
17GO:0015491: cation:cation antiporter activity1.13E-03
18GO:0019888: protein phosphatase regulator activity2.36E-03
19GO:0004842: ubiquitin-protein transferase activity2.38E-03
20GO:0017025: TBP-class protein binding2.76E-03
21GO:0004190: aspartic-type endopeptidase activity2.76E-03
22GO:0043130: ubiquitin binding3.18E-03
23GO:0015079: potassium ion transmembrane transporter activity3.40E-03
24GO:0035251: UDP-glucosyltransferase activity3.63E-03
25GO:0005515: protein binding4.75E-03
26GO:0004197: cysteine-type endopeptidase activity6.15E-03
27GO:0008375: acetylglucosaminyltransferase activity8.19E-03
28GO:0042803: protein homodimerization activity8.50E-03
29GO:0016757: transferase activity, transferring glycosyl groups9.31E-03
30GO:0005096: GTPase activator activity9.45E-03
31GO:0003924: GTPase activity1.00E-02
32GO:0004712: protein serine/threonine/tyrosine kinase activity1.15E-02
33GO:0016887: ATPase activity1.55E-02
34GO:0004674: protein serine/threonine kinase activity1.63E-02
35GO:0008234: cysteine-type peptidase activity1.71E-02
36GO:0016874: ligase activity1.96E-02
37GO:0003779: actin binding2.00E-02
38GO:0016758: transferase activity, transferring hexosyl groups2.35E-02
39GO:0015297: antiporter activity2.92E-02
40GO:0005525: GTP binding2.93E-02
41GO:0005509: calcium ion binding3.33E-02
42GO:0046982: protein heterodimerization activity4.06E-02
43GO:0003682: chromatin binding4.29E-02
44GO:0043531: ADP binding4.40E-02
RankGO TermAdjusted P value
1GO:0005785: signal recognition particle receptor complex0.00E+00
2GO:0071561: nucleus-vacuole junction0.00E+00
3GO:0000323: lytic vacuole1.75E-06
4GO:0030665: clathrin-coated vesicle membrane4.56E-05
5GO:0017119: Golgi transport complex5.49E-05
6GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I5.64E-05
7GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II5.64E-05
8GO:0031902: late endosome membrane6.78E-05
9GO:0030897: HOPS complex1.37E-04
10GO:0005770: late endosome3.02E-04
11GO:0031597: cytosolic proteasome complex8.44E-04
12GO:0016363: nuclear matrix8.44E-04
13GO:0031595: nuclear proteasome complex9.85E-04
14GO:0005802: trans-Golgi network1.03E-03
15GO:0005768: endosome1.24E-03
16GO:0005786: signal recognition particle, endoplasmic reticulum targeting1.29E-03
17GO:0009514: glyoxysome1.29E-03
18GO:0034045: pre-autophagosomal structure membrane1.29E-03
19GO:0008540: proteasome regulatory particle, base subcomplex1.62E-03
20GO:0005765: lysosomal membrane1.97E-03
21GO:0000139: Golgi membrane2.30E-03
22GO:0043234: protein complex2.97E-03
23GO:0030136: clathrin-coated vesicle4.58E-03
24GO:0005773: vacuole5.10E-03
25GO:0000785: chromatin6.15E-03
26GO:0005778: peroxisomal membrane7.00E-03
27GO:0000151: ubiquitin ligase complex9.13E-03
28GO:0005643: nuclear pore9.13E-03
29GO:0005829: cytosol1.11E-02
30GO:0005887: integral component of plasma membrane1.36E-02
31GO:0000502: proteasome complex1.59E-02
32GO:0005777: peroxisome2.05E-02
33GO:0005623: cell2.45E-02
34GO:0005783: endoplasmic reticulum2.73E-02
35GO:0009705: plant-type vacuole membrane3.02E-02
36GO:0005622: intracellular3.17E-02
37GO:0005615: extracellular space3.27E-02
38GO:0005774: vacuolar membrane3.57E-02
39GO:0005794: Golgi apparatus4.06E-02
40GO:0080008: Cul4-RING E3 ubiquitin ligase complex4.40E-02
<
Gene type



Gene DE type