GO Enrichment Analysis of Co-expressed Genes with
AT2G21960
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061157: mRNA destabilization | 0.00E+00 |
| 2 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 4.93E-08 |
| 5 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 7.44E-06 |
| 6 | GO:0015979: photosynthesis | 1.14E-05 |
| 7 | GO:0006546: glycine catabolic process | 1.40E-05 |
| 8 | GO:0015994: chlorophyll metabolic process | 1.40E-05 |
| 9 | GO:0000481: maturation of 5S rRNA | 1.30E-04 |
| 10 | GO:0010028: xanthophyll cycle | 1.30E-04 |
| 11 | GO:0034337: RNA folding | 1.30E-04 |
| 12 | GO:0006094: gluconeogenesis | 2.89E-04 |
| 13 | GO:1900871: chloroplast mRNA modification | 2.99E-04 |
| 14 | GO:0016122: xanthophyll metabolic process | 2.99E-04 |
| 15 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 2.99E-04 |
| 16 | GO:0000280: nuclear division | 4.92E-04 |
| 17 | GO:0006518: peptide metabolic process | 4.92E-04 |
| 18 | GO:2001295: malonyl-CoA biosynthetic process | 4.92E-04 |
| 19 | GO:0006000: fructose metabolic process | 4.92E-04 |
| 20 | GO:0061077: chaperone-mediated protein folding | 5.50E-04 |
| 21 | GO:1901332: negative regulation of lateral root development | 7.04E-04 |
| 22 | GO:0046836: glycolipid transport | 7.04E-04 |
| 23 | GO:0045454: cell redox homeostasis | 8.43E-04 |
| 24 | GO:0009409: response to cold | 8.72E-04 |
| 25 | GO:0010021: amylopectin biosynthetic process | 9.34E-04 |
| 26 | GO:0010023: proanthocyanidin biosynthetic process | 9.34E-04 |
| 27 | GO:0019464: glycine decarboxylation via glycine cleavage system | 9.34E-04 |
| 28 | GO:0045727: positive regulation of translation | 9.34E-04 |
| 29 | GO:0006810: transport | 1.02E-03 |
| 30 | GO:0019252: starch biosynthetic process | 1.02E-03 |
| 31 | GO:0006461: protein complex assembly | 1.18E-03 |
| 32 | GO:0016120: carotene biosynthetic process | 1.18E-03 |
| 33 | GO:0008152: metabolic process | 1.33E-03 |
| 34 | GO:0042549: photosystem II stabilization | 1.45E-03 |
| 35 | GO:0010256: endomembrane system organization | 1.45E-03 |
| 36 | GO:0009772: photosynthetic electron transport in photosystem II | 2.04E-03 |
| 37 | GO:0010196: nonphotochemical quenching | 2.04E-03 |
| 38 | GO:0032508: DNA duplex unwinding | 2.36E-03 |
| 39 | GO:0008610: lipid biosynthetic process | 2.36E-03 |
| 40 | GO:0005978: glycogen biosynthetic process | 2.36E-03 |
| 41 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.36E-03 |
| 42 | GO:0032544: plastid translation | 2.69E-03 |
| 43 | GO:0006002: fructose 6-phosphate metabolic process | 2.69E-03 |
| 44 | GO:0071482: cellular response to light stimulus | 2.69E-03 |
| 45 | GO:0009657: plastid organization | 2.69E-03 |
| 46 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.04E-03 |
| 47 | GO:0010206: photosystem II repair | 3.04E-03 |
| 48 | GO:0018107: peptidyl-threonine phosphorylation | 5.00E-03 |
| 49 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.00E-03 |
| 50 | GO:0009767: photosynthetic electron transport chain | 5.00E-03 |
| 51 | GO:0005986: sucrose biosynthetic process | 5.00E-03 |
| 52 | GO:0019253: reductive pentose-phosphate cycle | 5.44E-03 |
| 53 | GO:0032259: methylation | 5.75E-03 |
| 54 | GO:0005985: sucrose metabolic process | 5.88E-03 |
| 55 | GO:0016575: histone deacetylation | 7.30E-03 |
| 56 | GO:0035428: hexose transmembrane transport | 8.30E-03 |
| 57 | GO:0006662: glycerol ether metabolic process | 1.10E-02 |
| 58 | GO:0046323: glucose import | 1.10E-02 |
| 59 | GO:0009735: response to cytokinin | 1.12E-02 |
| 60 | GO:0010193: response to ozone | 1.28E-02 |
| 61 | GO:1901657: glycosyl compound metabolic process | 1.40E-02 |
| 62 | GO:0010027: thylakoid membrane organization | 1.66E-02 |
| 63 | GO:0009723: response to ethylene | 1.93E-02 |
| 64 | GO:0009817: defense response to fungus, incompatible interaction | 2.00E-02 |
| 65 | GO:0010311: lateral root formation | 2.07E-02 |
| 66 | GO:0034599: cellular response to oxidative stress | 2.45E-02 |
| 67 | GO:0009737: response to abscisic acid | 2.49E-02 |
| 68 | GO:0006631: fatty acid metabolic process | 2.68E-02 |
| 69 | GO:0016042: lipid catabolic process | 2.97E-02 |
| 70 | GO:0009644: response to high light intensity | 3.00E-02 |
| 71 | GO:0006364: rRNA processing | 3.51E-02 |
| 72 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.60E-02 |
| 73 | GO:0010224: response to UV-B | 3.60E-02 |
| 74 | GO:0006096: glycolytic process | 3.95E-02 |
| 75 | GO:0018105: peptidyl-serine phosphorylation | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 2 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 9 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 1.40E-05 |
| 10 | GO:0004856: xylulokinase activity | 1.30E-04 |
| 11 | GO:0047746: chlorophyllase activity | 2.99E-04 |
| 12 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.99E-04 |
| 13 | GO:0004047: aminomethyltransferase activity | 2.99E-04 |
| 14 | GO:0033201: alpha-1,4-glucan synthase activity | 2.99E-04 |
| 15 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 2.99E-04 |
| 16 | GO:0005528: FK506 binding | 4.55E-04 |
| 17 | GO:0004075: biotin carboxylase activity | 4.92E-04 |
| 18 | GO:0004373: glycogen (starch) synthase activity | 4.92E-04 |
| 19 | GO:0016787: hydrolase activity | 5.98E-04 |
| 20 | GO:0048487: beta-tubulin binding | 7.04E-04 |
| 21 | GO:0017089: glycolipid transporter activity | 7.04E-04 |
| 22 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 7.04E-04 |
| 23 | GO:0019201: nucleotide kinase activity | 7.04E-04 |
| 24 | GO:0009011: starch synthase activity | 9.34E-04 |
| 25 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 9.34E-04 |
| 26 | GO:0051861: glycolipid binding | 9.34E-04 |
| 27 | GO:0048038: quinone binding | 1.08E-03 |
| 28 | GO:0003989: acetyl-CoA carboxylase activity | 1.18E-03 |
| 29 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.18E-03 |
| 30 | GO:0004332: fructose-bisphosphate aldolase activity | 1.45E-03 |
| 31 | GO:0004017: adenylate kinase activity | 1.73E-03 |
| 32 | GO:0051920: peroxiredoxin activity | 1.73E-03 |
| 33 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.73E-03 |
| 34 | GO:0004620: phospholipase activity | 2.04E-03 |
| 35 | GO:0016209: antioxidant activity | 2.36E-03 |
| 36 | GO:0004033: aldo-keto reductase (NADP) activity | 2.36E-03 |
| 37 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 2.69E-03 |
| 38 | GO:0008168: methyltransferase activity | 2.69E-03 |
| 39 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.79E-03 |
| 40 | GO:0044183: protein binding involved in protein folding | 4.18E-03 |
| 41 | GO:0015386: potassium:proton antiporter activity | 4.18E-03 |
| 42 | GO:0031072: heat shock protein binding | 5.00E-03 |
| 43 | GO:0008266: poly(U) RNA binding | 5.44E-03 |
| 44 | GO:0004407: histone deacetylase activity | 6.81E-03 |
| 45 | GO:0015079: potassium ion transmembrane transporter activity | 7.30E-03 |
| 46 | GO:0004176: ATP-dependent peptidase activity | 7.79E-03 |
| 47 | GO:0003756: protein disulfide isomerase activity | 9.35E-03 |
| 48 | GO:0003727: single-stranded RNA binding | 9.35E-03 |
| 49 | GO:0047134: protein-disulfide reductase activity | 9.90E-03 |
| 50 | GO:0005355: glucose transmembrane transporter activity | 1.16E-02 |
| 51 | GO:0050662: coenzyme binding | 1.16E-02 |
| 52 | GO:0004791: thioredoxin-disulfide reductase activity | 1.16E-02 |
| 53 | GO:0004518: nuclease activity | 1.34E-02 |
| 54 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.40E-02 |
| 55 | GO:0008483: transaminase activity | 1.53E-02 |
| 56 | GO:0004601: peroxidase activity | 1.67E-02 |
| 57 | GO:0016788: hydrolase activity, acting on ester bonds | 1.70E-02 |
| 58 | GO:0004721: phosphoprotein phosphatase activity | 1.86E-02 |
| 59 | GO:0102483: scopolin beta-glucosidase activity | 1.86E-02 |
| 60 | GO:0004222: metalloendopeptidase activity | 2.15E-02 |
| 61 | GO:0052689: carboxylic ester hydrolase activity | 2.29E-02 |
| 62 | GO:0003746: translation elongation factor activity | 2.37E-02 |
| 63 | GO:0008422: beta-glucosidase activity | 2.52E-02 |
| 64 | GO:0004871: signal transducer activity | 2.60E-02 |
| 65 | GO:0005509: calcium ion binding | 2.77E-02 |
| 66 | GO:0004185: serine-type carboxypeptidase activity | 2.84E-02 |
| 67 | GO:0043621: protein self-association | 3.00E-02 |
| 68 | GO:0005198: structural molecule activity | 3.08E-02 |
| 69 | GO:0016491: oxidoreductase activity | 4.30E-02 |
| 70 | GO:0051082: unfolded protein binding | 4.51E-02 |
| 71 | GO:0015035: protein disulfide oxidoreductase activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.33E-35 |
| 3 | GO:0009534: chloroplast thylakoid | 8.27E-31 |
| 4 | GO:0009941: chloroplast envelope | 2.30E-21 |
| 5 | GO:0009570: chloroplast stroma | 1.19E-19 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.49E-17 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 1.09E-11 |
| 8 | GO:0030095: chloroplast photosystem II | 1.13E-09 |
| 9 | GO:0009579: thylakoid | 1.51E-07 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.05E-06 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 2.04E-05 |
| 12 | GO:0031977: thylakoid lumen | 2.16E-05 |
| 13 | GO:0019898: extrinsic component of membrane | 6.64E-05 |
| 14 | GO:0010287: plastoglobule | 1.20E-04 |
| 15 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.30E-04 |
| 16 | GO:0042651: thylakoid membrane | 5.01E-04 |
| 17 | GO:0005960: glycine cleavage complex | 7.04E-04 |
| 18 | GO:0010319: stromule | 1.38E-03 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 2.04E-03 |
| 20 | GO:0009501: amyloplast | 2.36E-03 |
| 21 | GO:0009538: photosystem I reaction center | 2.36E-03 |
| 22 | GO:0042644: chloroplast nucleoid | 3.04E-03 |
| 23 | GO:0031969: chloroplast membrane | 3.71E-03 |
| 24 | GO:0032040: small-subunit processome | 4.58E-03 |
| 25 | GO:0009508: plastid chromosome | 5.00E-03 |
| 26 | GO:0009706: chloroplast inner membrane | 6.22E-03 |
| 27 | GO:0009523: photosystem II | 1.22E-02 |
| 28 | GO:0009295: nucleoid | 1.53E-02 |
| 29 | GO:0048046: apoplast | 1.87E-02 |
| 30 | GO:0009505: plant-type cell wall | 4.04E-02 |