Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G21530

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0042493: response to drug0.00E+00
2GO:1905499: trichome papilla formation0.00E+00
3GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
4GO:0006642: triglyceride mobilization0.00E+00
5GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
6GO:0097164: ammonium ion metabolic process0.00E+00
7GO:0010027: thylakoid membrane organization3.26E-07
8GO:0042335: cuticle development2.68E-06
9GO:0090391: granum assembly5.12E-06
10GO:0015976: carbon utilization2.20E-05
11GO:0031365: N-terminal protein amino acid modification3.58E-05
12GO:0010196: nonphotochemical quenching9.92E-05
13GO:0043686: co-translational protein modification1.69E-04
14GO:1902458: positive regulation of stomatal opening1.69E-04
15GO:0019354: siroheme biosynthetic process1.69E-04
16GO:0046166: glyceraldehyde-3-phosphate biosynthetic process1.69E-04
17GO:0071555: cell wall organization2.44E-04
18GO:0006633: fatty acid biosynthetic process3.59E-04
19GO:0006529: asparagine biosynthetic process3.83E-04
20GO:0008616: queuosine biosynthetic process3.83E-04
21GO:1903426: regulation of reactive oxygen species biosynthetic process3.83E-04
22GO:0010024: phytochromobilin biosynthetic process3.83E-04
23GO:0007000: nucleolus organization3.83E-04
24GO:0043039: tRNA aminoacylation3.83E-04
25GO:0070981: L-asparagine biosynthetic process3.83E-04
26GO:0010207: photosystem II assembly4.71E-04
27GO:0051604: protein maturation6.25E-04
28GO:0006696: ergosterol biosynthetic process6.25E-04
29GO:0006065: UDP-glucuronate biosynthetic process6.25E-04
30GO:0032504: multicellular organism reproduction6.25E-04
31GO:0006788: heme oxidation6.25E-04
32GO:0051211: anisotropic cell growth6.25E-04
33GO:0000280: nuclear division6.25E-04
34GO:0019563: glycerol catabolic process6.25E-04
35GO:0009658: chloroplast organization8.13E-04
36GO:0009650: UV protection8.93E-04
37GO:0050482: arachidonic acid secretion8.93E-04
38GO:0019722: calcium-mediated signaling1.01E-03
39GO:0080022: primary root development1.17E-03
40GO:0010037: response to carbon dioxide1.18E-03
41GO:0030007: cellular potassium ion homeostasis1.18E-03
42GO:2000122: negative regulation of stomatal complex development1.18E-03
43GO:0006021: inositol biosynthetic process1.18E-03
44GO:0045038: protein import into chloroplast thylakoid membrane1.50E-03
45GO:0006665: sphingolipid metabolic process1.50E-03
46GO:0048359: mucilage metabolic process involved in seed coat development1.50E-03
47GO:0006869: lipid transport1.69E-03
48GO:0006014: D-ribose metabolic process1.85E-03
49GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.85E-03
50GO:0046855: inositol phosphate dephosphorylation1.85E-03
51GO:0006086: acetyl-CoA biosynthetic process from pyruvate1.85E-03
52GO:0009117: nucleotide metabolic process1.85E-03
53GO:0009828: plant-type cell wall loosening1.87E-03
54GO:0007267: cell-cell signaling1.98E-03
55GO:0000910: cytokinesis2.10E-03
56GO:0010019: chloroplast-nucleus signaling pathway2.22E-03
57GO:0071470: cellular response to osmotic stress2.22E-03
58GO:0048280: vesicle fusion with Golgi apparatus2.22E-03
59GO:0010411: xyloglucan metabolic process2.61E-03
60GO:2000070: regulation of response to water deprivation3.02E-03
61GO:0006644: phospholipid metabolic process3.02E-03
62GO:0010119: regulation of stomatal movement3.33E-03
63GO:0032544: plastid translation3.46E-03
64GO:0015996: chlorophyll catabolic process3.46E-03
65GO:0007186: G-protein coupled receptor signaling pathway3.46E-03
66GO:0015780: nucleotide-sugar transport3.91E-03
67GO:0034765: regulation of ion transmembrane transport3.91E-03
68GO:0006779: porphyrin-containing compound biosynthetic process4.38E-03
69GO:0042761: very long-chain fatty acid biosynthetic process4.38E-03
70GO:0006949: syncytium formation4.87E-03
71GO:0006896: Golgi to vacuole transport4.87E-03
72GO:0042546: cell wall biogenesis4.88E-03
73GO:0000038: very long-chain fatty acid metabolic process5.38E-03
74GO:0006415: translational termination5.38E-03
75GO:0009664: plant-type cell wall organization5.89E-03
76GO:0042538: hyperosmotic salinity response5.89E-03
77GO:0006790: sulfur compound metabolic process5.91E-03
78GO:0045037: protein import into chloroplast stroma5.91E-03
79GO:0006094: gluconeogenesis6.46E-03
80GO:0015979: photosynthesis7.02E-03
81GO:0006541: glutamine metabolic process7.02E-03
82GO:0010020: chloroplast fission7.02E-03
83GO:0019253: reductive pentose-phosphate cycle7.02E-03
84GO:0006096: glycolytic process7.47E-03
85GO:0046854: phosphatidylinositol phosphorylation7.60E-03
86GO:0009969: xyloglucan biosynthetic process7.60E-03
87GO:0010167: response to nitrate7.60E-03
88GO:0019853: L-ascorbic acid biosynthetic process7.60E-03
89GO:0010025: wax biosynthetic process8.20E-03
90GO:0000027: ribosomal large subunit assembly8.81E-03
91GO:0051017: actin filament bundle assembly8.81E-03
92GO:0016042: lipid catabolic process9.38E-03
93GO:0019953: sexual reproduction9.44E-03
94GO:0006418: tRNA aminoacylation for protein translation9.44E-03
95GO:0043622: cortical microtubule organization9.44E-03
96GO:0007017: microtubule-based process9.44E-03
97GO:0016998: cell wall macromolecule catabolic process1.01E-02
98GO:0051260: protein homooligomerization1.01E-02
99GO:0030245: cellulose catabolic process1.08E-02
100GO:0009831: plant-type cell wall modification involved in multidimensional cell growth1.14E-02
101GO:0009411: response to UV1.14E-02
102GO:0010091: trichome branching1.21E-02
103GO:0042147: retrograde transport, endosome to Golgi1.28E-02
104GO:0010182: sugar mediated signaling pathway1.43E-02
105GO:0009646: response to absence of light1.51E-02
106GO:0019252: starch biosynthetic process1.58E-02
107GO:0006623: protein targeting to vacuole1.58E-02
108GO:0006891: intra-Golgi vesicle-mediated transport1.66E-02
109GO:0010583: response to cyclopentenone1.74E-02
110GO:1901657: glycosyl compound metabolic process1.82E-02
111GO:0071805: potassium ion transmembrane transport1.99E-02
112GO:0015031: protein transport2.01E-02
113GO:0010029: regulation of seed germination2.24E-02
114GO:0042128: nitrate assimilation2.33E-02
115GO:0009826: unidimensional cell growth2.33E-02
116GO:0015995: chlorophyll biosynthetic process2.42E-02
117GO:0006888: ER to Golgi vesicle-mediated transport2.42E-02
118GO:0009817: defense response to fungus, incompatible interaction2.61E-02
119GO:0009813: flavonoid biosynthetic process2.70E-02
120GO:0006811: ion transport2.79E-02
121GO:0007568: aging2.89E-02
122GO:0080167: response to karrikin3.00E-02
123GO:0016051: carbohydrate biosynthetic process3.08E-02
124GO:0034599: cellular response to oxidative stress3.18E-02
125GO:0006631: fatty acid metabolic process3.49E-02
126GO:0045454: cell redox homeostasis3.59E-02
127GO:0008643: carbohydrate transport3.91E-02
128GO:0032259: methylation4.23E-02
129GO:0009809: lignin biosynthetic process4.57E-02
RankGO TermAdjusted P value
1GO:0046408: chlorophyll synthetase activity0.00E+00
2GO:0047889: ferredoxin-nitrate reductase activity0.00E+00
3GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
4GO:0015269: calcium-activated potassium channel activity0.00E+00
5GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding0.00E+00
6GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
7GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
8GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0048307: ferredoxin-nitrite reductase activity0.00E+00
10GO:0050421: nitrite reductase (NO-forming) activity0.00E+00
11GO:0010347: L-galactose-1-phosphate phosphatase activity1.69E-04
12GO:0030794: (S)-coclaurine-N-methyltransferase activity1.69E-04
13GO:0004560: alpha-L-fucosidase activity1.69E-04
14GO:0004807: triose-phosphate isomerase activity1.69E-04
15GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity1.69E-04
16GO:0004831: tyrosine-tRNA ligase activity1.69E-04
17GO:0004071: aspartate-ammonia ligase activity1.69E-04
18GO:0042586: peptide deformylase activity1.69E-04
19GO:0009374: biotin binding1.69E-04
20GO:0052832: inositol monophosphate 3-phosphatase activity3.83E-04
21GO:0008479: queuine tRNA-ribosyltransferase activity3.83E-04
22GO:0008934: inositol monophosphate 1-phosphatase activity3.83E-04
23GO:0052833: inositol monophosphate 4-phosphatase activity3.83E-04
24GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity3.83E-04
25GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity3.83E-04
26GO:0004089: carbonate dehydratase activity4.18E-04
27GO:0003979: UDP-glucose 6-dehydrogenase activity6.25E-04
28GO:0005504: fatty acid binding6.25E-04
29GO:0016788: hydrolase activity, acting on ester bonds8.36E-04
30GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity8.93E-04
31GO:0035529: NADH pyrophosphatase activity8.93E-04
32GO:0048487: beta-tubulin binding8.93E-04
33GO:0016149: translation release factor activity, codon specific8.93E-04
34GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity8.93E-04
35GO:0052793: pectin acetylesterase activity1.18E-03
36GO:0045430: chalcone isomerase activity1.18E-03
37GO:0004392: heme oxygenase (decyclizing) activity1.18E-03
38GO:0052689: carboxylic ester hydrolase activity1.30E-03
39GO:0003989: acetyl-CoA carboxylase activity1.50E-03
40GO:0009922: fatty acid elongase activity1.50E-03
41GO:0004040: amidase activity1.50E-03
42GO:0004623: phospholipase A2 activity1.50E-03
43GO:0016762: xyloglucan:xyloglucosyl transferase activity1.54E-03
44GO:0015271: outward rectifier potassium channel activity1.85E-03
45GO:0080030: methyl indole-3-acetate esterase activity1.85E-03
46GO:0016462: pyrophosphatase activity1.85E-03
47GO:0051920: peroxiredoxin activity2.22E-03
48GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.22E-03
49GO:0004747: ribokinase activity2.22E-03
50GO:0051753: mannan synthase activity2.22E-03
51GO:0016798: hydrolase activity, acting on glycosyl bonds2.61E-03
52GO:0016831: carboxy-lyase activity2.61E-03
53GO:0008235: metalloexopeptidase activity2.61E-03
54GO:0030674: protein binding, bridging3.02E-03
55GO:0016209: antioxidant activity3.02E-03
56GO:0008865: fructokinase activity3.02E-03
57GO:0052747: sinapyl alcohol dehydrogenase activity3.02E-03
58GO:0008289: lipid binding3.33E-03
59GO:0005267: potassium channel activity3.46E-03
60GO:0003747: translation release factor activity3.91E-03
61GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors3.91E-03
62GO:0004601: peroxidase activity4.51E-03
63GO:0004177: aminopeptidase activity5.38E-03
64GO:0045551: cinnamyl-alcohol dehydrogenase activity5.91E-03
65GO:0008378: galactosyltransferase activity5.91E-03
66GO:0031072: heat shock protein binding6.46E-03
67GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.35E-03
68GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity8.20E-03
69GO:0102336: 3-oxo-arachidoyl-CoA synthase activity8.20E-03
70GO:0102337: 3-oxo-cerotoyl-CoA synthase activity8.20E-03
71GO:0030599: pectinesterase activity8.47E-03
72GO:0004857: enzyme inhibitor activity8.81E-03
73GO:0043424: protein histidine kinase binding9.44E-03
74GO:0005216: ion channel activity9.44E-03
75GO:0008810: cellulase activity1.14E-02
76GO:0008514: organic anion transmembrane transporter activity1.21E-02
77GO:0004812: aminoacyl-tRNA ligase activity1.28E-02
78GO:0003713: transcription coactivator activity1.43E-02
79GO:0008080: N-acetyltransferase activity1.43E-02
80GO:0051015: actin filament binding1.82E-02
81GO:0005200: structural constituent of cytoskeleton1.99E-02
82GO:0016722: oxidoreductase activity, oxidizing metal ions1.99E-02
83GO:0008168: methyltransferase activity2.33E-02
84GO:0102483: scopolin beta-glucosidase activity2.42E-02
85GO:0008236: serine-type peptidase activity2.51E-02
86GO:0000149: SNARE binding3.28E-02
87GO:0008422: beta-glucosidase activity3.28E-02
88GO:0051539: 4 iron, 4 sulfur cluster binding3.38E-02
89GO:0005484: SNAP receptor activity3.69E-02
90GO:0004871: signal transducer activity3.76E-02
91GO:0005198: structural molecule activity4.01E-02
92GO:0051287: NAD binding4.23E-02
93GO:0005509: calcium ion binding4.37E-02
94GO:0003924: GTPase activity4.41E-02
95GO:0009055: electron carrier activity4.73E-02
96GO:0045330: aspartyl esterase activity4.91E-02
RankGO TermAdjusted P value
1GO:0009515: granal stacked thylakoid0.00E+00
2GO:0009507: chloroplast5.05E-14
3GO:0009570: chloroplast stroma1.76E-10
4GO:0009534: chloroplast thylakoid4.53E-09
5GO:0009535: chloroplast thylakoid membrane5.10E-09
6GO:0048046: apoplast1.00E-07
7GO:0009543: chloroplast thylakoid lumen1.30E-06
8GO:0009579: thylakoid7.74E-06
9GO:0046658: anchored component of plasma membrane7.83E-06
10GO:0009505: plant-type cell wall1.49E-05
11GO:0009941: chloroplast envelope1.66E-05
12GO:0009923: fatty acid elongase complex1.69E-04
13GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex1.69E-04
14GO:0031977: thylakoid lumen5.23E-04
15GO:0005618: cell wall5.73E-04
16GO:0031225: anchored component of membrane5.98E-04
17GO:0009528: plastid inner membrane6.25E-04
18GO:0009317: acetyl-CoA carboxylase complex6.25E-04
19GO:0009654: photosystem II oxygen evolving complex7.14E-04
20GO:0009532: plastid stroma7.83E-04
21GO:0005576: extracellular region1.02E-03
22GO:0009527: plastid outer membrane1.18E-03
23GO:0009526: plastid envelope1.18E-03
24GO:0019898: extrinsic component of membrane1.44E-03
25GO:0055035: plastid thylakoid membrane1.50E-03
26GO:0009533: chloroplast stromal thylakoid2.61E-03
27GO:0009707: chloroplast outer membrane2.89E-03
28GO:0012507: ER to Golgi transport vesicle membrane3.02E-03
29GO:0046930: pore complex3.46E-03
30GO:0045298: tubulin complex3.91E-03
31GO:0042651: thylakoid membrane9.44E-03
32GO:0031410: cytoplasmic vesicle1.08E-02
33GO:0015629: actin cytoskeleton1.14E-02
34GO:0009504: cell plate1.58E-02
35GO:0009536: plastid1.91E-02
36GO:0010319: stromule1.99E-02
37GO:0009506: plasmodesma2.85E-02
38GO:0005874: microtubule2.90E-02
39GO:0031201: SNARE complex3.49E-02
40GO:0031902: late endosome membrane3.49E-02
41GO:0005856: cytoskeleton4.01E-02
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Gene type



Gene DE type